RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 UBE2D1P51668 147 aa9.67□□□□□ -0.86
CCDC187-201ENST00000563590 LINC01620Q4KN68 170 aa9.67□□□□□ -0.86
CCDC187-201ENST00000563590 TRAV21A0A0B4J279 112 aa9.67□□□□□ -0.86
CCDC187-201ENST00000563590 LY6LH3BQJ8 138 aa9.67□□□□□ -0.86
CCDC187-201ENST00000563590 CLEC2BQ92478 149 aa9.67□□□□□ -0.86
CCDC187-201ENST00000563590 RNF5Q99942 180 aa9.67□□□□□ -0.86
CCDC187-201ENST00000563590 TSPEAR-AS2P59090 65 aa9.66□□□□□ -0.86
CCDC187-201ENST00000563590 IGHV7-4-1A0A0J9YVY3 117 aa9.66□□□□□ -0.86
CCDC187-201ENST00000563590 SDHAF1A6NFY7 115 aa9.66□□□□□ -0.86
CCDC187-201ENST00000563590 BUB3O43684 328 aa9.66□□□□□ -0.86
CCDC187-201ENST00000563590 PRR9Q5T870 116 aa9.66□□□□□ -0.86
CCDC187-201ENST00000563590 PRORYQ9H606 182 aa9.66□□□□□ -0.86
CCDC187-201ENST00000563590 RHODO00212 210 aa9.66□□□□□ -0.86
CCDC187-201ENST00000563590 UBE2D3P61077 147 aa9.66□□□□□ -0.86
CCDC187-201ENST00000563590 UBE2D2P62837 147 aa9.66□□□□□ -0.86
CCDC187-201ENST00000563590 PAPPA-AS1Q5QFB9 102 aa9.66□□□□□ -0.86
CCDC187-201ENST00000563590 ZNF625Q96I27 306 aaPredicted RBP9.65□□□□□ -0.86
CCDC187-201ENST00000563590 IGHV3OR16-12A0A075B7B8 117 aa9.65□□□□□ -0.86
CCDC187-201ENST00000563590 DAND5Q8N907 189 aa9.65□□□□□ -0.86
CCDC187-201ENST00000563590 SRSF2Q01130 221 aaKnown RBP9.65□□□□□ -0.87
CCDC187-201ENST00000563590 CFAP46Q8IYW2 2715 aa9.64□□□□□ -0.87
CCDC187-201ENST00000563590 A0A0J9YXV3 536 aa9.64□□□□□ -0.87
CCDC187-201ENST00000563590 IGHV3-30P01768 117 aa9.64□□□□□ -0.87
CCDC187-201ENST00000563590 IGHV3-30-5P0DP03 117 aa9.64□□□□□ -0.87
CCDC187-201ENST00000563590 Q6ZSV7 163 aa9.64□□□□□ -0.87
CCDC187-201ENST00000563590 C9orf153Q5TBE3 101 aa9.64□□□□□ -0.87
CCDC187-201ENST00000563590 CHD6Q8TD26 2715 aa9.63□□□□□ -0.87
CCDC187-201ENST00000563590 FAM236AA0A1B0GUQ0 79 aa9.63□□□□□ -0.87
CCDC187-201ENST00000563590 FAM236BA0A1B0GV22 79 aa9.63□□□□□ -0.87
CCDC187-201ENST00000563590 H3BUX3 64 aa9.63□□□□□ -0.87
CCDC187-201ENST00000563590 M0R2P5 195 aa9.63□□□□□ -0.87
CCDC187-201ENST00000563590 ELANEP08246 267 aa9.63□□□□□ -0.87
CCDC187-201ENST00000563590 EEF1AKMT3Q96AZ1 226 aa9.63□□□□□ -0.87
CCDC187-201ENST00000563590 ZNF580Q9UK33 172 aa9.63□□□□□ -0.87
CCDC187-201ENST00000563590 NHLRC4P0CG21 123 aaPredicted RBP9.63□□□□□ -0.87
CCDC187-201ENST00000563590 A0A1W2PPR1 153 aa9.62□□□□□ -0.87
CCDC187-201ENST00000563590 C19orf84I3L1E1 186 aa9.62□□□□□ -0.87
CCDC187-201ENST00000563590 VCYO14598 125 aa9.62□□□□□ -0.87
CCDC187-201ENST00000563590 SLC25A29Q8N8R3 303 aa9.62□□□□□ -0.87
CCDC187-201ENST00000563590 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
CCDC187-201ENST00000563590 BLCAPP62952 87 aa9.62□□□□□ -0.87
CCDC187-201ENST00000563590 NPBQ8NG41 125 aa9.62□□□□□ -0.87
CCDC187-201ENST00000563590 TRBV12-3P01733 135 aa9.61□□□□□ -0.87
CCDC187-201ENST00000563590 ID1P41134 155 aa9.61□□□□□ -0.87
CCDC187-201ENST00000563590 IGSF10Q6WRI0 2623 aa9.61□□□□□ -0.87
CCDC187-201ENST00000563590 ZNF876PQ49A33 203 aa9.61□□□□□ -0.87
CCDC187-201ENST00000563590 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.61□□□□□ -0.87
CCDC187-201ENST00000563590 ZNRF2Q8NHG8 242 aa9.61□□□□□ -0.87
CCDC187-201ENST00000563590 TRAV12-2A0A075B6T6 113 aa9.6□□□□□ -0.87
CCDC187-201ENST00000563590 IGHV7-81A0A0B4J1V7 117 aa9.6□□□□□ -0.87
CCDC187-201ENST00000563590 TRIAP1O43715 76 aa9.6□□□□□ -0.87
CCDC187-201ENST00000563590 CD28P10747 220 aa9.6□□□□□ -0.87
CCDC187-201ENST00000563590 ITLN2Q8WWU7 325 aaPredicted RBP9.6□□□□□ -0.87
CCDC187-201ENST00000563590 PPP1R17O96001 155 aa9.6□□□□□ -0.87
CCDC187-201ENST00000563590 EDA2RQ9HAV5 297 aa9.6□□□□□ -0.87
CCDC187-201ENST00000563590 A8MZ25 164 aa9.6□□□□□ -0.87
CCDC187-201ENST00000563590 UBE2E1P51965 193 aa9.6□□□□□ -0.87
CCDC187-201ENST00000563590 SUMO4Q6EEV6 95 aa9.6□□□□□ -0.87
CCDC187-201ENST00000563590 TRGV11A0A075B6L2 103 aa9.59□□□□□ -0.87
CCDC187-201ENST00000563590 CEMP1Q6PRD7 247 aaPredicted RBP9.59□□□□□ -0.87
CCDC187-201ENST00000563590 TIMM21Q9BVV7 248 aa9.59□□□□□ -0.87
CCDC187-201ENST00000563590 USP24Q9UPU5 2620 aa9.59□□□□□ -0.87
CCDC187-201ENST00000563590 A0A1W2PRX2 142 aa9.59□□□□□ -0.87
CCDC187-201ENST00000563590 C20orf173Q96LM9 149 aa9.59□□□□□ -0.88
CCDC187-201ENST00000563590 CCL19Q99731 98 aa9.59□□□□□ -0.88
CCDC187-201ENST00000563590 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.88
CCDC187-201ENST00000563590 YAE1D1Q9NRH1 226 aa9.59□□□□□ -0.88
CCDC187-201ENST00000563590 CRYGDP07320 174 aa9.58□□□□□ -0.88
CCDC187-201ENST00000563590 DGAT2L7PQ6IED9 249 aa9.58□□□□□ -0.88
CCDC187-201ENST00000563590 TMEM101Q96IK0 257 aa9.58□□□□□ -0.88
CCDC187-201ENST00000563590 KLK9Q9UKQ9 250 aa9.58□□□□□ -0.88
CCDC187-201ENST00000563590 IGLV4-69A0A075B6H9 119 aa9.57□□□□□ -0.88
CCDC187-201ENST00000563590 LINC01619G3V211 115 aa9.57□□□□□ -0.88
CCDC187-201ENST00000563590 IGHV4-38-2P0DP08 117 aa9.57□□□□□ -0.88
CCDC187-201ENST00000563590 HRNRQ86YZ3 2850 aaPredicted RBP9.57□□□□□ -0.88
CCDC187-201ENST00000563590 TRBV10-2A0A0K0K1G8 114 aa9.57□□□□□ -0.88
CCDC187-201ENST00000563590 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
CCDC187-201ENST00000563590 COX6B1P14854 86 aa9.57□□□□□ -0.88
CCDC187-201ENST00000563590 ZNF22P17026 224 aaPredicted RBP9.57□□□□□ -0.88
CCDC187-201ENST00000563590 ZFAND3Q9H8U3 227 aa9.57□□□□□ -0.88
CCDC187-201ENST00000563590 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
CCDC187-201ENST00000563590 TRAV41A0A0B4J266 112 aa9.56□□□□□ -0.88
CCDC187-201ENST00000563590 NPFFO15130 113 aa9.56□□□□□ -0.88
CCDC187-201ENST00000563590 C9orf139Q6ZV77 190 aa9.56□□□□□ -0.88
CCDC187-201ENST00000563590 NDUFA12Q9UI09 145 aa9.56□□□□□ -0.88
CCDC187-201ENST00000563590 NF1P21359 2839 aa9.56□□□□□ -0.88
CCDC187-201ENST00000563590 M0QXV9 152 aa9.56□□□□□ -0.88
CCDC187-201ENST00000563590 KLK5Q9Y337 293 aaPredicted RBP9.56□□□□□ -0.88
CCDC187-201ENST00000563590 TSHBP01222 138 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 C10orf99Q6UWK7 81 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 UNQ9165/PRO28630Q6UXU0 137 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 LY6G5BQ8NDX9 201 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 IGHV4-61A0A0C4DH41 118 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 CLPSL1A2RUU4 121 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 CCDC140Q96MF4 163 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 ODF3Q96PU9 254 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 FAM110AQ9BQ89 295 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 OOSP1A8MZH6 123 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 GAGE2AQ6NT46 116 aa9.55□□□□□ -0.88
CCDC187-201ENST00000563590 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms