RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 LINC00315P59091 139 aa10.77□□□□□ -0.69
USB1-208ENST00000563207 RIGQ13278 110 aa10.77□□□□□ -0.69
USB1-208ENST00000563207 ESRGQ1W209 222 aa10.77□□□□□ -0.69
USB1-208ENST00000563207 Q6ZSN1 163 aa10.77□□□□□ -0.69
USB1-208ENST00000563207 CTDSP1Q9GZU7 261 aa10.77□□□□□ -0.69
USB1-208ENST00000563207 CARHSP1Q9Y2V2 147 aaKnown RBP10.77□□□□□ -0.69
USB1-208ENST00000563207 LRP1BQ9NZR2 4599 aa10.76□□□□□ -0.69
USB1-208ENST00000563207 F5H697 171 aa10.76□□□□□ -0.69
USB1-208ENST00000563207 C6orf223Q8N319 242 aa10.76□□□□□ -0.69
USB1-208ENST00000563207 FRZBQ92765 325 aa10.76□□□□□ -0.69
USB1-208ENST00000563207 TIRAPP58753 221 aa10.75□□□□□ -0.69
USB1-208ENST00000563207 TMEM191AQ9H0A3 160 aa10.75□□□□□ -0.69
USB1-208ENST00000563207 Q9H8V8 135 aa10.75□□□□□ -0.69
USB1-208ENST00000563207 RPL36AP83881 106 aaKnown RBP10.74□□□□□ -0.69
USB1-208ENST00000563207 NDUFA5Q16718 116 aa10.74□□□□□ -0.69
USB1-208ENST00000563207 RPL36ALQ969Q0 106 aaKnown RBP10.74□□□□□ -0.69
USB1-208ENST00000563207 IMMP2LQ96T52 175 aa10.74□□□□□ -0.69
USB1-208ENST00000563207 TRBV7-3A0A075B6L6 115 aa10.73□□□□□ -0.69
USB1-208ENST00000563207 LOC100131303A0A0U1RQF7 123 aa10.73□□□□□ -0.69
USB1-208ENST00000563207 S100A8P05109 93 aa10.73□□□□□ -0.69
USB1-208ENST00000563207 MGPP08493 103 aa10.73□□□□□ -0.69
USB1-208ENST00000563207 LYPD5Q6UWN5 251 aa10.73□□□□□ -0.69
USB1-208ENST00000563207 ATP5L2Q7Z4Y8 100 aa10.73□□□□□ -0.69
USB1-208ENST00000563207 ATP6V0E2Q8NHE4 81 aa10.73□□□□□ -0.69
USB1-208ENST00000563207 UPK3BQ9BT76 320 aa10.73□□□□□ -0.69
USB1-208ENST00000563207 TMEM242Q9NWH2 141 aa10.73□□□□□ -0.69
USB1-208ENST00000563207 MRPS16Q9Y3D3 137 aaKnown RBP10.73□□□□□ -0.69
USB1-208ENST00000563207 C16orf90A8MZG2 172 aa10.72□□□□□ -0.69
USB1-208ENST00000563207 LINC00694P0DN24 101 aa10.72□□□□□ -0.69
USB1-208ENST00000563207 RHEBQ15382 184 aa10.72□□□□□ -0.69
USB1-208ENST00000563207 DNAJC30Q96LL9 226 aa10.72□□□□□ -0.69
USB1-208ENST00000563207 APOBP04114 4563 aaKnown RBP10.72□□□□□ -0.69
USB1-208ENST00000563207 A0A087WWC5 75 aa10.71□□□□□ -0.69
USB1-208ENST00000563207 GAGE12JA6NER3 117 aa10.71□□□□□ -0.69
USB1-208ENST00000563207 M0QY20 66 aa10.71□□□□□ -0.69
USB1-208ENST00000563207 GAGE1Q13065 139 aa10.71□□□□□ -0.69
USB1-208ENST00000563207 GAGE4Q13068 117 aa10.71□□□□□ -0.69
USB1-208ENST00000563207 GAGE5Q13069 117 aa10.71□□□□□ -0.69
USB1-208ENST00000563207 GAGE13Q4V321 117 aa10.71□□□□□ -0.69
USB1-208ENST00000563207 SUMO4Q6EEV6 95 aa10.71□□□□□ -0.69
USB1-208ENST00000563207 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.71□□□□□ -0.69
USB1-208ENST00000563207 GTSF1LQ9H1H1 148 aa10.71□□□□□ -0.69
USB1-208ENST00000563207 HBBP68871 147 aa10.7□□□□□ -0.7
USB1-208ENST00000563207 KCNIP4Q6PIL6 250 aa10.7□□□□□ -0.7
USB1-208ENST00000563207 RASL11AQ6T310 242 aa10.7□□□□□ -0.7
USB1-208ENST00000563207 SVBPQ8N300 66 aa10.7□□□□□ -0.7
USB1-208ENST00000563207 NEXN-AS1Q8NBZ9 246 aa10.7□□□□□ -0.7
USB1-208ENST00000563207 CLRN3Q8NCR9 226 aa10.7□□□□□ -0.7
USB1-208ENST00000563207 TRAV9-1A0A075B6T8 112 aa10.69□□□□□ -0.7
USB1-208ENST00000563207 C7orf77A4D0Y5 90 aa10.69□□□□□ -0.7
USB1-208ENST00000563207 SNAPINO95295 136 aa10.69□□□□□ -0.7
USB1-208ENST00000563207 APOC3P02656 99 aa10.69□□□□□ -0.7
USB1-208ENST00000563207 UBE2D3P61077 147 aa10.69□□□□□ -0.7
USB1-208ENST00000563207 UBE2D2P62837 147 aa10.69□□□□□ -0.7
USB1-208ENST00000563207 BTF3L4Q96K17 158 aa10.69□□□□□ -0.7
USB1-208ENST00000563207 NIT2Q9NQR4 276 aa10.69□□□□□ -0.7
USB1-208ENST00000563207 Q9UF83 564 aa10.69□□□□□ -0.7
USB1-208ENST00000563207 TNFRSF18Q9Y5U5 241 aa10.69□□□□□ -0.7
USB1-208ENST00000563207 A0A1B0GXF2 115 aa10.68□□□□□ -0.7
USB1-208ENST00000563207 KRTAP10-2P60368 255 aa10.68□□□□□ -0.7
USB1-208ENST00000563207 SPATA12Q7Z6I5 190 aa10.68□□□□□ -0.7
USB1-208ENST00000563207 DAZ4Q86SG3 579 aaKnown RBP10.68□□□□□ -0.7
USB1-208ENST00000563207 GATD1Q8NB37 220 aa10.68□□□□□ -0.7
USB1-208ENST00000563207 MRAP2Q96G30 205 aa10.68□□□□□ -0.7
USB1-208ENST00000563207 DAZ3Q9NR90 486 aaKnown RBP10.68□□□□□ -0.7
USB1-208ENST00000563207 DNAH5Q8TE73 4624 aa10.68□□□□□ -0.7
USB1-208ENST00000563207 RAB4AP20338 218 aa10.67□□□□□ -0.7
USB1-208ENST00000563207 S100PP25815 95 aa10.67□□□□□ -0.7
USB1-208ENST00000563207 FUSP35637 526 aaKnown RBP eCLIP10.67□□□□□ -0.7
USB1-208ENST00000563207 CAMPP49913 170 aa10.67□□□□□ -0.7
USB1-208ENST00000563207 TMEM97Q5BJF2 176 aa10.67□□□□□ -0.7
USB1-208ENST00000563207 LELP1Q5T871 98 aa10.67□□□□□ -0.7
USB1-208ENST00000563207 MRPL54Q6P161 138 aaKnown RBP10.67□□□□□ -0.7
USB1-208ENST00000563207 TRAV8-6A0A0B4J262 113 aa10.66□□□□□ -0.7
USB1-208ENST00000563207 SIVA1O15304 175 aa10.66□□□□□ -0.7
USB1-208ENST00000563207 PPP1R17O96001 155 aa10.66□□□□□ -0.7
USB1-208ENST00000563207 FAM104BQ5XKR9 115 aa10.66□□□□□ -0.7
USB1-208ENST00000563207 SLC7A5P1Q8MH63 180 aa10.66□□□□□ -0.7
USB1-208ENST00000563207 RNF185Q96GF1 192 aa10.66□□□□□ -0.7
USB1-208ENST00000563207 RPS10P5Q9NQ39 176 aa10.66□□□□□ -0.7
USB1-208ENST00000563207 K7EP13 123 aa10.65□□□□□ -0.7
USB1-208ENST00000563207 AMN1Q8IY45 258 aa10.65□□□□□ -0.7
USB1-208ENST00000563207 OR10J3Q5JRS4 329 aa10.64□□□□□ -0.71
USB1-208ENST00000563207 TRAV26-2A0A0B4J265 109 aa10.63□□□□□ -0.71
USB1-208ENST00000563207 TRBV6-5A0A0K0K1A5 114 aa10.63□□□□□ -0.71
USB1-208ENST00000563207 TTC32Q5I0X7 151 aa10.63□□□□□ -0.71
USB1-208ENST00000563207 Q6ZRN7 208 aaPredicted RBP10.63□□□□□ -0.71
USB1-208ENST00000563207 MAPKAPK5-AS1Q8N8E1 139 aa10.63□□□□□ -0.71
USB1-208ENST00000563207 TRAV9-2A0A087WT02 112 aa10.62□□□□□ -0.71
USB1-208ENST00000563207 CDK2AP2O75956 126 aa10.62□□□□□ -0.71
USB1-208ENST00000563207 PPBPP02775 128 aa10.62□□□□□ -0.71
USB1-208ENST00000563207 DNAH10OSP0CZ25 163 aa10.62□□□□□ -0.71
USB1-208ENST00000563207 MRPL51Q4U2R6 128 aaKnown RBP10.62□□□□□ -0.71
USB1-208ENST00000563207 TRBV6-8A0A0A6YYG3 113 aa10.61□□□□□ -0.71
USB1-208ENST00000563207 IGHV3-38A0A0C4DH36 116 aa10.61□□□□□ -0.71
USB1-208ENST00000563207 BTF3P20290 206 aaKnown RBP10.61□□□□□ -0.71
USB1-208ENST00000563207 COX19Q49B96 90 aa10.61□□□□□ -0.71
USB1-208ENST00000563207 CKS2P33552 79 aa10.6□□□□□ -0.71
USB1-208ENST00000563207 PKIAP61925 76 aa10.6□□□□□ -0.71
USB1-208ENST00000563207 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms