RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 KRTAP1-5Q9BYS1 174 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 TMEM191AQ9H0A3 160 aa9.16□□□□□ -0.94
CDH1-204ENST00000562118 CARHSP1Q9Y2V2 147 aaKnown RBP9.16□□□□□ -0.94
CDH1-204ENST00000562118 EPPK1P58107 5090 aaKnown RBP9.15□□□□□ -0.94
CDH1-204ENST00000562118 A0A1B0GXF2 115 aa9.15□□□□□ -0.94
CDH1-204ENST00000562118 K7EP13 123 aa9.15□□□□□ -0.94
CDH1-204ENST00000562118 RPL36AP83881 106 aaKnown RBP9.15□□□□□ -0.94
CDH1-204ENST00000562118 RPL36ALQ969Q0 106 aaKnown RBP9.15□□□□□ -0.94
CDH1-204ENST00000562118 DNAJC30Q96LL9 226 aa9.15□□□□□ -0.94
CDH1-204ENST00000562118 DNAH11Q96DT5 4516 aa9.15□□□□□ -0.95
CDH1-204ENST00000562118 H7C1H1 209 aa9.14□□□□□ -0.95
CDH1-204ENST00000562118 SIVA1O15304 175 aa9.14□□□□□ -0.95
CDH1-204ENST00000562118 SSTP61278 116 aa9.14□□□□□ -0.95
CDH1-204ENST00000562118 A0A087WWC5 75 aa9.13□□□□□ -0.95
CDH1-204ENST00000562118 A0A1B0GW15 77 aa9.13□□□□□ -0.95
CDH1-204ENST00000562118 F8W036 122 aa9.13□□□□□ -0.95
CDH1-204ENST00000562118 RIGQ13278 110 aa9.13□□□□□ -0.95
CDH1-204ENST00000562118 LINC01556Q5JQF7 62 aa9.13□□□□□ -0.95
CDH1-204ENST00000562118 RASL11AQ6T310 242 aa9.13□□□□□ -0.95
CDH1-204ENST00000562118 WFDC10BQ8IUB3 73 aa9.13□□□□□ -0.95
CDH1-204ENST00000562118 BORCS7Q96B45 105 aa9.13□□□□□ -0.95
CDH1-204ENST00000562118 RNF185Q96GF1 192 aa9.13□□□□□ -0.95
CDH1-204ENST00000562118 IGLV2-18A0A075B6J9 118 aa9.12□□□□□ -0.95
CDH1-204ENST00000562118 MT-ND4LP03901 98 aa9.12□□□□□ -0.95
CDH1-204ENST00000562118 MGPP08493 103 aa9.12□□□□□ -0.95
CDH1-204ENST00000562118 TTC32Q5I0X7 151 aa9.12□□□□□ -0.95
CDH1-204ENST00000562118 ATP5L2Q7Z4Y8 100 aa9.12□□□□□ -0.95
CDH1-204ENST00000562118 DAZ4Q86SG3 579 aaKnown RBP9.12□□□□□ -0.95
CDH1-204ENST00000562118 IMMP2LQ96T52 175 aa9.12□□□□□ -0.95
CDH1-204ENST00000562118 NIT2Q9NQR4 276 aa9.12□□□□□ -0.95
CDH1-204ENST00000562118 DAZ3Q9NR90 486 aaKnown RBP9.12□□□□□ -0.95
CDH1-204ENST00000562118 TRBV6-5A0A0K0K1A5 114 aa9.11□□□□□ -0.95
CDH1-204ENST00000562118 F5H697 171 aa9.11□□□□□ -0.95
CDH1-204ENST00000562118 RTL8CO15255 209 aa9.11□□□□□ -0.95
CDH1-204ENST00000562118 SMIM15Q7Z3B0 74 aa9.11□□□□□ -0.95
CDH1-204ENST00000562118 TMEM242Q9NWH2 141 aa9.11□□□□□ -0.95
CDH1-204ENST00000562118 PKHD1P08F94 4074 aa9.1□□□□□ -0.95
CDH1-204ENST00000562118 RAB4AP20338 218 aa9.1□□□□□ -0.95
CDH1-204ENST00000562118 NTM-AS1Q6ZSK4 140 aa9.1□□□□□ -0.95
CDH1-204ENST00000562118 CTDSP1Q9GZU7 261 aa9.1□□□□□ -0.95
CDH1-204ENST00000562118 TRBV6-8A0A0A6YYG3 113 aa9.09□□□□□ -0.95
CDH1-204ENST00000562118 TRAV26-2A0A0B4J265 109 aa9.09□□□□□ -0.95
CDH1-204ENST00000562118 IGHV3-38A0A0C4DH36 116 aa9.09□□□□□ -0.95
CDH1-204ENST00000562118 HBBP68871 147 aa9.09□□□□□ -0.95
CDH1-204ENST00000562118 TMEM97Q5BJF2 176 aa9.09□□□□□ -0.95
CDH1-204ENST00000562118 Q6ZRN7 208 aaPredicted RBP9.09□□□□□ -0.95
CDH1-204ENST00000562118 MRAP2Q96G30 205 aa9.09□□□□□ -0.95
CDH1-204ENST00000562118 TRAV8-6A0A0B4J262 113 aa9.08□□□□□ -0.96
CDH1-204ENST00000562118 M0R2N4 97 aa9.08□□□□□ -0.96
CDH1-204ENST00000562118 IQCJQ1A5X6 159 aa9.08□□□□□ -0.96
CDH1-204ENST00000562118 FAM104BQ5XKR9 115 aa9.08□□□□□ -0.96
CDH1-204ENST00000562118 AMN1Q8IY45 258 aa9.08□□□□□ -0.96
CDH1-204ENST00000562118 CHCHD7Q9BUK0 85 aa9.08□□□□□ -0.96
CDH1-204ENST00000562118 TRAV9-1A0A075B6T8 112 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 GAS8-AS1O95177 125 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 S100A8P05109 93 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 RHEBQ15382 184 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 OR10J3Q5JRS4 329 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 LINC00336Q6ZUF6 198 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 NIT1Q86X76 327 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 C6orf223Q8N319 242 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 NRACQ8N912 160 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 CLRN3Q8NCR9 226 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 TNFRSF18Q9Y5U5 241 aa9.07□□□□□ -0.96
CDH1-204ENST00000562118 LAGE3Q14657 143 aa9.06□□□□□ -0.96
CDH1-204ENST00000562118 MRPL51Q4U2R6 128 aaKnown RBP9.06□□□□□ -0.96
CDH1-204ENST00000562118 C1orf134Q5TEV5 83 aa9.06□□□□□ -0.96
CDH1-204ENST00000562118 C10orf126Q8N4M7 172 aa9.06□□□□□ -0.96
CDH1-204ENST00000562118 RPL39LQ96EH5 51 aaKnown RBP9.06□□□□□ -0.96
CDH1-204ENST00000562118 TRBV24-1A0A075B6N3 115 aa9.05□□□□□ -0.96
CDH1-204ENST00000562118 C7orf77A4D0Y5 90 aa9.05□□□□□ -0.96
CDH1-204ENST00000562118 IBA57-AS1B1ANH7 110 aa9.05□□□□□ -0.96
CDH1-204ENST00000562118 RPS10P46783 165 aaKnown RBP9.05□□□□□ -0.96
CDH1-204ENST00000562118 POLR2KP53803 58 aaKnown RBP9.05□□□□□ -0.96
CDH1-204ENST00000562118 RPL32P62910 135 aaKnown RBP9.05□□□□□ -0.96
CDH1-204ENST00000562118 MRPL54Q6P161 138 aaKnown RBP9.05□□□□□ -0.96
CDH1-204ENST00000562118 BTF3L4Q96K17 158 aa9.05□□□□□ -0.96
CDH1-204ENST00000562118 TRAV9-2A0A087WT02 112 aa9.04□□□□□ -0.96
CDH1-204ENST00000562118 TRBV27A0A0K0K1C4 114 aa9.04□□□□□ -0.96
CDH1-204ENST00000562118 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
CDH1-204ENST00000562118 NCR2O95944 276 aa9.04□□□□□ -0.96
CDH1-204ENST00000562118 CAMPP49913 170 aa9.04□□□□□ -0.96
CDH1-204ENST00000562118 Q8N3U1 123 aa9.04□□□□□ -0.96
CDH1-204ENST00000562118 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.04□□□□□ -0.96
CDH1-204ENST00000562118 TMEM70Q9BUB7 260 aa9.04□□□□□ -0.96
CDH1-204ENST00000562118 DNAH5Q8TE73 4624 aa9.04□□□□□ -0.96
CDH1-204ENST00000562118 DYNC1H1Q14204 4646 aaKnown RBP9.03□□□□□ -0.96
CDH1-204ENST00000562118 SDHAF1A6NFY7 115 aa9.03□□□□□ -0.96
CDH1-204ENST00000562118 PPP1R17O96001 155 aa9.03□□□□□ -0.96
CDH1-204ENST00000562118 TRBV25-1A0A075B6N4 114 aa9.02□□□□□ -0.97
CDH1-204ENST00000562118 IGHV1-24A0A0C4DH33 117 aa9.02□□□□□ -0.97
CDH1-204ENST00000562118 PHOX2AO14813 284 aa9.02□□□□□ -0.97
CDH1-204ENST00000562118 PKIAP61925 76 aa9.02□□□□□ -0.97
CDH1-204ENST00000562118 SVBPQ8N300 66 aa9.02□□□□□ -0.97
CDH1-204ENST00000562118 BIRC6Q9NR09 4857 aa9.02□□□□□ -0.97
CDH1-204ENST00000562118 PRSS47A8MTI9 375 aa9.01□□□□□ -0.97
CDH1-204ENST00000562118 PPBPP02775 128 aa9.01□□□□□ -0.97
CDH1-204ENST00000562118 KCNIP4Q6PIL6 250 aa9.01□□□□□ -0.97
CDH1-204ENST00000562118 ATRAIDQ6UW56 229 aa9.01□□□□□ -0.97
CDH1-204ENST00000562118 NFE4Q86UQ8 179 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms