RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 RHOHQ15669 191 aa5.47□□□□□ -1.53
CDH1-203ENST00000561751 C4orf26Q17RF5 130 aa5.47□□□□□ -1.53
CDH1-203ENST00000561751 SPANXN1Q5VSR9 72 aa5.47□□□□□ -1.53
CDH1-203ENST00000561751 C9orf85Q96MD7 179 aa5.47□□□□□ -1.53
CDH1-203ENST00000561751 DOPEY2Q9Y3R5 2298 aa5.47□□□□□ -1.53
CDH1-203ENST00000561751 FER1L5A0AVI2 2057 aa5.47□□□□□ -1.53
CDH1-203ENST00000561751 COL12A1Q99715 3063 aa5.46□□□□□ -1.53
CDH1-203ENST00000561751 ZNF407Q9C0G0 2248 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 COL27A1Q8IZC6 1860 aaPredicted RBP5.46□□□□□ -1.54
CDH1-203ENST00000561751 SMIM26A0A096LP01 95 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 K7EIM0 57 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 COX7A2LO14548 114 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 IGHV1-2P23083 117 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 PFN2P35080 140 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 POLR2KP53803 58 aaKnown RBP5.46□□□□□ -1.54
CDH1-203ENST00000561751 NPC2P61916 151 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 KLK9Q2XQG4 91 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 S100A7L2Q5SY68 101 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 ATP5EP2Q5VTU8 51 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 HCP5Q6MZN7 132 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 HRCT1Q6UXD1 115 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 C9orf47Q6ZRZ4 202 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 LEAP2Q969E1 77 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 VSIG2Q96IQ7 327 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 FAM19A4Q96LR4 140 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 LAMTOR3Q9UHA4 124 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 KLK9Q9UKQ9 250 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 KLK5Q9Y337 293 aaPredicted RBP5.46□□□□□ -1.54
CDH1-203ENST00000561751 V9GYY9 64 aa5.46□□□□□ -1.54
CDH1-203ENST00000561751 IGLV3-9A0A075B6K5 115 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 IGKV2-40A0A087WW87 121 aaPredicted RBP5.45□□□□□ -1.54
CDH1-203ENST00000561751 TRBV10-3A0A0K0K1G6 114 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 PINLYPA6NC86 204 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 I3L3M4 83 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 NXPH4O95158 308 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 TSHBP01222 138 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 IGKV2D-40P01614 121 aaPredicted RBP5.45□□□□□ -1.54
CDH1-203ENST00000561751 IGHV3-48P01763 117 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 TFF1P04155 84 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 MAGEA5P43359 124 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 UBE2E1P51965 193 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 ATP5EP56381 51 aaPredicted RBP5.45□□□□□ -1.54
CDH1-203ENST00000561751 TSPEAR-AS2P59090 65 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 KRTAP10-2P60368 255 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 MIAQ16674 131 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 C10orf55Q5SWW7 151 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 RUSC1-AS1Q66K80 236 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 TMEM61Q8N0U2 210 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 C3orf56Q8N813 242 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 CTSZQ9UBR2 303 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 RTTNQ86VV8 2226 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 SDK2Q58EX2 2172 aa5.45□□□□□ -1.54
CDH1-203ENST00000561751 TRGV5A0A0B4J1U4 118 aa5.44□□□□□ -1.54
CDH1-203ENST00000561751 IGHV1-18A0A0C4DH31 117 aa5.44□□□□□ -1.54
CDH1-203ENST00000561751 TRBV27A0A0K0K1C4 114 aa5.44□□□□□ -1.54
CDH1-203ENST00000561751 TRGV3P03979 118 aa5.44□□□□□ -1.54
CDH1-203ENST00000561751 GPHB5Q86YW7 130 aa5.44□□□□□ -1.54
CDH1-203ENST00000561751 TMEM86BQ8N661 226 aa5.44□□□□□ -1.54
CDH1-203ENST00000561751 SMCR5Q8TEV8 140 aa5.44□□□□□ -1.54
CDH1-203ENST00000561751 CFHR4Q92496 578 aa5.44□□□□□ -1.54
CDH1-203ENST00000561751 LITAFQ99732 161 aa5.44□□□□□ -1.54
CDH1-203ENST00000561751 TTTY12Q9BZ98 90 aa5.44□□□□□ -1.54
CDH1-203ENST00000561751 CNTRLQ7Z7A1 2325 aa5.43□□□□□ -1.54
CDH1-203ENST00000561751 BOD1L1Q8NFC6 3051 aa5.43□□□□□ -1.54
CDH1-203ENST00000561751 ZNHIT1O43257 154 aa5.43□□□□□ -1.54
CDH1-203ENST00000561751 SYNJ2BPP57105 145 aa5.43□□□□□ -1.54
CDH1-203ENST00000561751 NSUN5P1Q3KNT7 163 aa5.43□□□□□ -1.54
CDH1-203ENST00000561751 C14orf178Q8N769 122 aaPredicted RBP5.43□□□□□ -1.54
CDH1-203ENST00000561751 LINC00477Q96M19 166 aa5.43□□□□□ -1.54
CDH1-203ENST00000561751 OBSCN-AS1Q96MR7 158 aa5.43□□□□□ -1.54
CDH1-203ENST00000561751 CCL13Q99616 98 aa5.43□□□□□ -1.54
CDH1-203ENST00000561751 ESPL1Q14674 2120 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 HEATR1Q9H583 2144 aaKnown RBP5.42□□□□□ -1.54
CDH1-203ENST00000561751 TRAV26-2A0A0B4J265 109 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 IGHV1-3A0A0C4DH29 117 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 IGHV3-64DA0A0J9YX35 117 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.42□□□□□ -1.54
CDH1-203ENST00000561751 NDUFC1O43677 76 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 OXTP01178 125 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 IGHG2P01859 326 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 Q0VFX4 171 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 BEAN1Q3B7T3 259 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 APRG1Q8IVJ8 170 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 RNF182Q8N6D2 247 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 TP53TG1Q9Y2A0 90 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 SMAD5-AS1Q9Y6J3 95 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 RAI1Q7Z5J4 1906 aaPredicted RBP5.42□□□□□ -1.54
CDH1-203ENST00000561751 ABCA12Q86UK0 2595 aa5.42□□□□□ -1.54
CDH1-203ENST00000561751 SPTBN1Q01082 2364 aaKnown RBP5.42□□□□□ -1.54
CDH1-203ENST00000561751 NBASA2RRP1 2371 aa5.41□□□□□ -1.54
CDH1-203ENST00000561751 PRRC2CQ9Y520 2896 aaKnown RBP5.41□□□□□ -1.54
CDH1-203ENST00000561751 CREBBPQ92793 2442 aa5.41□□□□□ -1.54
CDH1-203ENST00000561751 IGHV3OR16-10A0A075B7F0 116 aa5.41□□□□□ -1.54
CDH1-203ENST00000561751 TRAV21A0A0B4J279 112 aa5.41□□□□□ -1.54
CDH1-203ENST00000561751 IGHV1-58A0A0C4DH39 117 aa5.41□□□□□ -1.54
CDH1-203ENST00000561751 USP17L23D6RBM5 183 aa5.41□□□□□ -1.54
CDH1-203ENST00000561751 RNASE4P34096 147 aaKnown RBP5.41□□□□□ -1.54
CDH1-203ENST00000561751 TIRAPP58753 221 aa5.41□□□□□ -1.54
CDH1-203ENST00000561751 CIRBPQ14011 172 aaKnown RBP5.41□□□□□ -1.54
CDH1-203ENST00000561751 GFRALQ6UXV0 394 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms