RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.9□□□□□ -1.14
CARMIL3-204ENST00000561354 WDR73Q6P4I2 378 aa7.9□□□□□ -1.14
CARMIL3-204ENST00000561354 NHLRC2Q8NBF2 726 aa7.9□□□□□ -1.14
CARMIL3-204ENST00000561354 HIST1H2BHQ93079 126 aa7.9□□□□□ -1.14
CARMIL3-204ENST00000561354 HIST1H2BNQ99877 126 aa7.9□□□□□ -1.14
CARMIL3-204ENST00000561354 HIST1H2BMQ99879 126 aa7.9□□□□□ -1.14
CARMIL3-204ENST00000561354 MLST8Q9BVC4 326 aa7.9□□□□□ -1.14
CARMIL3-204ENST00000561354 FAM30AQ9NZY2 134 aa7.9□□□□□ -1.14
CARMIL3-204ENST00000561354 GNRH2O43555 120 aa7.89□□□□□ -1.15
CARMIL3-204ENST00000561354 GATCO43716 136 aaKnown RBP7.89□□□□□ -1.15
CARMIL3-204ENST00000561354 TRGC1P0CF51 173 aa7.89□□□□□ -1.15
CARMIL3-204ENST00000561354 FABP9Q0Z7S8 132 aa7.89□□□□□ -1.15
CARMIL3-204ENST00000561354 GFRA4Q9GZZ7 299 aa7.89□□□□□ -1.15
CARMIL3-204ENST00000561354 NAGKQ9UJ70 344 aa7.89□□□□□ -1.15
CARMIL3-204ENST00000561354 TRAV34A0A0B4J273 112 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 TRAV21A0A0B4J279 112 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 FAM231BA6NCW3 169 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 CIDEAO60543 219 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 GOLT1AQ6ZVE7 132 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 DAZAP1Q96EP5 407 aaKnown RBP7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 KCNS1Q96KK3 526 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 LINC00479Q96M42 142 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 GNB1LQ9BYB4 327 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 RNASE7Q9H1E1 156 aaKnown RBP7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 NAT8BQ9UHF3 227 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 RPH3ALQ9UNE2 315 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 SRRM2Q9UQ35 2752 aaKnown RBP7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 VPS13BQ7Z7G8 4022 aa7.88□□□□□ -1.15
CARMIL3-204ENST00000561354 TRBV6-4A0A1B0GX49 114 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 KRTAP29-1A8MX34 341 aaPredicted RBP7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 LAGE3Q14657 143 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 OR10J3Q5JRS4 329 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 COA6Q5JTJ3 125 aaKnown RBP7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 SAPCD1Q5SSQ6 148 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 LELP1Q5T871 98 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 Q6ZSA8 131 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 COX8CQ7Z4L0 72 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 ATP5L2Q7Z4Y8 100 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 SLC25A29Q8N8R3 303 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 TSKUQ8WUA8 353 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 PRADC1Q9BSG0 188 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 RPP21Q9H633 154 aaKnown RBP7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 Q9HAA7 133 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 TRAPPC1Q9Y5R8 145 aa7.87□□□□□ -1.15
CARMIL3-204ENST00000561354 C19orf71A6NCJ1 209 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 A8MWL6 223 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 IGLV2-11P01706 119 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 P01737 135 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 HLA-DQA1P01909 254 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 SMIM6P0DI80 62 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 AKR1D1P51857 326 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 NDUFA6P56556 154 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 RHOHQ15669 191 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 NUDT10Q8NFP7 164 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 NUDT11Q96G61 164 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 TM2D2Q9BX73 214 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 PSG8Q9UQ74 426 aa7.86□□□□□ -1.15
CARMIL3-204ENST00000561354 RS1O15537 224 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 IGHV3-30P01768 117 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 IGHV3-33P01772 117 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 IGHV3-30-3P0DP02 117 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 IGHV3-30-5P0DP03 117 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 S100A2P29034 98 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 ZNF876PQ49A33 203 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 CFAP126Q5VTH2 177 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 PRR27Q6MZM9 219 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 PRNTQ86SH4 94 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 DEFB104AQ8WTQ1 72 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 NDFIP1Q9BT67 221 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 GTSF1LQ9H1H1 148 aa7.85□□□□□ -1.15
CARMIL3-204ENST00000561354 SMUG1Q53HV7 270 aa7.84□□□□□ -1.15
CARMIL3-204ENST00000561354 LINC00518Q8N0U6 118 aa7.84□□□□□ -1.15
CARMIL3-204ENST00000561354 LINC00528Q8N1L1 170 aa7.84□□□□□ -1.15
CARMIL3-204ENST00000561354 PTH2Q96A98 100 aa7.84□□□□□ -1.15
CARMIL3-204ENST00000561354 TRAV8-3A0A0A6YYJ7 113 aa7.83□□□□□ -1.16
CARMIL3-204ENST00000561354 TRAV8-1A0A0A6YYK1 113 aa7.83□□□□□ -1.16
CARMIL3-204ENST00000561354 XKRY2A2RUG3 117 aa7.83□□□□□ -1.16
CARMIL3-204ENST00000561354 WFDC2Q14508 124 aa7.83□□□□□ -1.16
CARMIL3-204ENST00000561354 HIST3H2BBQ8N257 126 aa7.83□□□□□ -1.16
CARMIL3-204ENST00000561354 ATP6V0E2Q8NHE4 81 aa7.83□□□□□ -1.16
CARMIL3-204ENST00000561354 MRPL18Q9H0U6 180 aaKnown RBP7.83□□□□□ -1.16
CARMIL3-204ENST00000561354 A0A1B0GW15 77 aa7.82□□□□□ -1.16
CARMIL3-204ENST00000561354 HIGD1CA8MV81 97 aa7.82□□□□□ -1.16
CARMIL3-204ENST00000561354 RPS20P60866 119 aaKnown RBP7.82□□□□□ -1.16
CARMIL3-204ENST00000561354 NUP35Q8NFH5 326 aa7.82□□□□□ -1.16
CARMIL3-204ENST00000561354 C9orf85Q96MD7 179 aa7.82□□□□□ -1.16
CARMIL3-204ENST00000561354 IGHV3-73A0A0B4J1V6 119 aa7.81□□□□□ -1.16
CARMIL3-204ENST00000561354 FOXA3P55318 350 aaPredicted RBP7.81□□□□□ -1.16
CARMIL3-204ENST00000561354 HBBP68871 147 aa7.81□□□□□ -1.16
CARMIL3-204ENST00000561354 FAM162BQ5T6X4 162 aa7.81□□□□□ -1.16
CARMIL3-204ENST00000561354 TMEM136Q6ZRR5 245 aa7.81□□□□□ -1.16
CARMIL3-204ENST00000561354 ZC2HC1AQ96GY0 325 aa7.81□□□□□ -1.16
CARMIL3-204ENST00000561354 SGK494Q96LW2 274 aa7.81□□□□□ -1.16
CARMIL3-204ENST00000561354 C11orf21Q9P2W6 132 aa7.81□□□□□ -1.16
CARMIL3-204ENST00000561354 DNAH8Q96JB1 4490 aa7.81□□□□□ -1.16
CARMIL3-204ENST00000561354 A0A1B0GXF2 115 aa7.8□□□□□ -1.16
CARMIL3-204ENST00000561354 ZNF80P51504 273 aaPredicted RBP7.8□□□□□ -1.16
CARMIL3-204ENST00000561354 Q0VG73 95 aa7.8□□□□□ -1.16
CARMIL3-204ENST00000561354 DNLZQ5SXM8 178 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms