RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 UBE2WQ96B02 151 aa11.38□□□□□ -0.59
CDC42BPB-208ENST00000561271 DAZAP1Q96EP5 407 aaKnown RBP11.38□□□□□ -0.59
CDC42BPB-208ENST00000561271 MED9Q9NWA0 146 aa11.38□□□□□ -0.59
CDC42BPB-208ENST00000561271 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 IGKV2D-24A0A075B6R9 120 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 TRBV6-8A0A0A6YYG3 113 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 MGPP08493 103 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 RPS20P60866 119 aaKnown RBP11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 Q5VSD8 79 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 KCNIP4Q6PIL6 250 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 BAALCQ8WXS3 180 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 RMI2Q96E14 147 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 SMIM12Q96EX1 92 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 CHCHD7Q9BUK0 85 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 VAX2Q9UIW0 290 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 DNAH8Q96JB1 4490 aa11.37□□□□□ -0.59
CDC42BPB-208ENST00000561271 P01737 135 aa11.36□□□□□ -0.59
CDC42BPB-208ENST00000561271 SMR3BP02814 79 aaPredicted RBP11.36□□□□□ -0.59
CDC42BPB-208ENST00000561271 MPV17L2Q567V2 206 aa11.36□□□□□ -0.59
CDC42BPB-208ENST00000561271 TMEM70Q9BUB7 260 aa11.36□□□□□ -0.59
CDC42BPB-208ENST00000561271 COX11Q9Y6N1 276 aa11.35□□□□□ -0.59
CDC42BPB-208ENST00000561271 FLG2Q5D862 2391 aaPredicted RBP11.35□□□□□ -0.59
CDC42BPB-208ENST00000561271 TMEM262E9PQX1 116 aa11.34□□□□□ -0.59
CDC42BPB-208ENST00000561271 CACNG7P62955 275 aa11.34□□□□□ -0.59
CDC42BPB-208ENST00000561271 ELOBQ15370 118 aa11.34□□□□□ -0.59
CDC42BPB-208ENST00000561271 C15orf54Q8N8G6 183 aa11.34□□□□□ -0.59
CDC42BPB-208ENST00000561271 FRZBQ92765 325 aa11.34□□□□□ -0.59
CDC42BPB-208ENST00000561271 CHCHD5Q9BSY4 110 aa11.34□□□□□ -0.59
CDC42BPB-208ENST00000561271 VPS13BQ7Z7G8 4022 aa11.34□□□□□ -0.59
CDC42BPB-208ENST00000561271 SUMO4Q6EEV6 95 aa11.33□□□□□ -0.6
CDC42BPB-208ENST00000561271 ALKAL2Q6UX46 152 aa11.33□□□□□ -0.6
CDC42BPB-208ENST00000561271 NTM-AS1Q6ZSK4 140 aa11.33□□□□□ -0.6
CDC42BPB-208ENST00000561271 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPB-208ENST00000561271 FAM30AQ9NZY2 134 aa11.33□□□□□ -0.6
CDC42BPB-208ENST00000561271 XKRY2A2RUG3 117 aa11.32□□□□□ -0.6
CDC42BPB-208ENST00000561271 CRPP02741 224 aa11.32□□□□□ -0.6
CDC42BPB-208ENST00000561271 ATRAIDQ6UW56 229 aa11.32□□□□□ -0.6
CDC42BPB-208ENST00000561271 LYZL1Q6UWQ5 148 aa11.32□□□□□ -0.6
CDC42BPB-208ENST00000561271 BIN3Q9NQY0 253 aa11.32□□□□□ -0.6
CDC42BPB-208ENST00000561271 K7EN84 100 aa11.31□□□□□ -0.6
CDC42BPB-208ENST00000561271 M0QY20 66 aa11.31□□□□□ -0.6
CDC42BPB-208ENST00000561271 ANGP03950 147 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-208ENST00000561271 TAGLN2P37802 199 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-208ENST00000561271 CTRLP40313 264 aa11.31□□□□□ -0.6
CDC42BPB-208ENST00000561271 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
CDC42BPB-208ENST00000561271 Q8N976 141 aa11.31□□□□□ -0.6
CDC42BPB-208ENST00000561271 SRRM2Q9UQ35 2752 aaKnown RBP11.31□□□□□ -0.6
CDC42BPB-208ENST00000561271 F2Z2F3 143 aa11.3□□□□□ -0.6
CDC42BPB-208ENST00000561271 H7C1H1 209 aa11.3□□□□□ -0.6
CDC42BPB-208ENST00000561271 Q0VG73 95 aa11.3□□□□□ -0.6
CDC42BPB-208ENST00000561271 GAGE6Q13070 117 aa11.3□□□□□ -0.6
CDC42BPB-208ENST00000561271 ENHOQ6UWT2 76 aa11.3□□□□□ -0.6
CDC42BPB-208ENST00000561271 NUDT10Q8NFP7 164 aa11.3□□□□□ -0.6
CDC42BPB-208ENST00000561271 NUDT11Q96G61 164 aa11.3□□□□□ -0.6
CDC42BPB-208ENST00000561271 C1orf43Q9BWL3 253 aa11.3□□□□□ -0.6
CDC42BPB-208ENST00000561271 RNASE7Q9H1E1 156 aaKnown RBP11.3□□□□□ -0.6
CDC42BPB-208ENST00000561271 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPB-208ENST00000561271 TRBV25-1A0A075B6N4 114 aa11.29□□□□□ -0.6
CDC42BPB-208ENST00000561271 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
CDC42BPB-208ENST00000561271 NKX2-5P52952 324 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPB-208ENST00000561271 TMEM97Q5BJF2 176 aa11.29□□□□□ -0.6
CDC42BPB-208ENST00000561271 CLPSL2Q6UWE3 100 aa11.29□□□□□ -0.6
CDC42BPB-208ENST00000561271 RPP21Q9H633 154 aaKnown RBP11.29□□□□□ -0.6
CDC42BPB-208ENST00000561271 INAFM2P0DMQ5 153 aa11.28□□□□□ -0.6
CDC42BPB-208ENST00000561271 NTF3P20783 257 aa11.28□□□□□ -0.6
CDC42BPB-208ENST00000561271 PKIAP61925 76 aa11.28□□□□□ -0.6
CDC42BPB-208ENST00000561271 OCC1Q8TAD7 63 aa11.28□□□□□ -0.6
CDC42BPB-208ENST00000561271 DPH3P1Q9H4G8 78 aa11.28□□□□□ -0.6
CDC42BPB-208ENST00000561271 HLA-DQA1P01909 254 aa11.27□□□□□ -0.61
CDC42BPB-208ENST00000561271 RBX1P62877 108 aa11.27□□□□□ -0.61
CDC42BPB-208ENST00000561271 BLOC1S1P78537 153 aa11.27□□□□□ -0.61
CDC42BPB-208ENST00000561271 RASL11AQ6T310 242 aa11.27□□□□□ -0.61
CDC42BPB-208ENST00000561271 Q6ZSA8 131 aa11.27□□□□□ -0.61
CDC42BPB-208ENST00000561271 IGHV1-24A0A0C4DH33 117 aa11.26□□□□□ -0.61
CDC42BPB-208ENST00000561271 IQCJQ1A5X6 159 aa11.26□□□□□ -0.61
CDC42BPB-208ENST00000561271 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
CDC42BPB-208ENST00000561271 TMEM250H0YL14 139 aa11.25□□□□□ -0.61
CDC42BPB-208ENST00000561271 CEBPGP53567 150 aa11.25□□□□□ -0.61
CDC42BPB-208ENST00000561271 TWIST1Q15672 202 aa11.25□□□□□ -0.61
CDC42BPB-208ENST00000561271 MIAQ16674 131 aa11.25□□□□□ -0.61
CDC42BPB-208ENST00000561271 CNFNQ9BYD5 112 aa11.25□□□□□ -0.61
CDC42BPB-208ENST00000561271 FAM229AH3BQW9 127 aa11.24□□□□□ -0.61
CDC42BPB-208ENST00000561271 LINC00269Q8N2A0 174 aa11.24□□□□□ -0.61
CDC42BPB-208ENST00000561271 LYPD6BQ8NI32 183 aa11.24□□□□□ -0.61
CDC42BPB-208ENST00000561271 GTSF1Q8WW33 167 aa11.24□□□□□ -0.61
CDC42BPB-208ENST00000561271 WDR73Q6P4I2 378 aa11.23□□□□□ -0.61
CDC42BPB-208ENST00000561271 TMEM243Q9BU79 118 aa11.23□□□□□ -0.61
CDC42BPB-208ENST00000561271 NIT2Q9NQR4 276 aa11.23□□□□□ -0.61
CDC42BPB-208ENST00000561271 PRR34Q9NV39 138 aa11.23□□□□□ -0.61
CDC42BPB-208ENST00000561271 MYCBP2O75592 4640 aa11.22□□□□□ -0.61
CDC42BPB-208ENST00000561271 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
CDC42BPB-208ENST00000561271 USP17L23D6RBM5 183 aa11.22□□□□□ -0.61
CDC42BPB-208ENST00000561271 C14orf177Q52M58 125 aa11.22□□□□□ -0.61
CDC42BPB-208ENST00000561271 A0A1B0GVG6 124 aa11.21□□□□□ -0.61
CDC42BPB-208ENST00000561271 GATCO43716 136 aaKnown RBP11.21□□□□□ -0.61
CDC42BPB-208ENST00000561271 SCXQ7RTU7 201 aa11.21□□□□□ -0.61
CDC42BPB-208ENST00000561271 C20orf203Q8NBC4 194 aa11.21□□□□□ -0.61
CDC42BPB-208ENST00000561271 PGLYRP4Q96LB8 373 aa11.21□□□□□ -0.61
CDC42BPB-208ENST00000561271 IGLV10-54A0A075B6I4 117 aa11.2□□□□□ -0.62
CDC42BPB-208ENST00000561271 REG3AQ06141 175 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms