RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 ZNF345Q14585 488 aa17.6■□□□□ 0.41
SNRPA1-215ENST00000561187 USP17L23D6RBM5 183 aa17.59■□□□□ 0.41
SNRPA1-215ENST00000561187 CXCL1P09341 107 aa17.59■□□□□ 0.41
SNRPA1-215ENST00000561187 DERL1Q9BUN8 251 aa17.59■□□□□ 0.41
SNRPA1-215ENST00000561187 TPPP3Q9BW30 176 aa17.59■□□□□ 0.41
SNRPA1-215ENST00000561187 UMAD1C9J7I0 102 aa17.58■□□□□ 0.4
SNRPA1-215ENST00000561187 IGLV2-8P01709 118 aa17.58■□□□□ 0.4
SNRPA1-215ENST00000561187 GAGE6Q13070 117 aa17.58■□□□□ 0.4
SNRPA1-215ENST00000561187 C14orf177Q52M58 125 aa17.58■□□□□ 0.4
SNRPA1-215ENST00000561187 NTM-AS1Q6ZSK4 140 aa17.58■□□□□ 0.4
SNRPA1-215ENST00000561187 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.58■□□□□ 0.4
SNRPA1-215ENST00000561187 KANTRA0A1W2PQU2 76 aa17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 KRTAP29-1A8MX34 341 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 BCL2L11O43521 198 aa17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 MGPP08493 103 aa17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 H2AFB1P0C5Y9 115 aa17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 OR5AL1P0C617 328 aa17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 SMIM17P0DL12 118 aa17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 GZMBP10144 247 aa17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 RPL35P42766 123 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 SSBP4Q9BWG4 385 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 FAT3Q8TDW7 4589 aa17.57■□□□□ 0.4
SNRPA1-215ENST00000561187 TMUB2Q71RG4 321 aa17.56■□□□□ 0.4
SNRPA1-215ENST00000561187 AP1S3Q96PC3 154 aa17.56■□□□□ 0.4
SNRPA1-215ENST00000561187 KRTAP10-4P60372 401 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-215ENST00000561187 GNG13Q9P2W3 67 aa17.55■□□□□ 0.4
SNRPA1-215ENST00000561187 RBX1P62877 108 aa17.53■□□□□ 0.4
SNRPA1-215ENST00000561187 CCL20P78556 96 aa17.53■□□□□ 0.4
SNRPA1-215ENST00000561187 KIF25-AS1Q9Y6Z4 181 aa17.53■□□□□ 0.4
SNRPA1-215ENST00000561187 PRSS1P07477 247 aa17.52■□□□□ 0.4
SNRPA1-215ENST00000561187 MIAQ16674 131 aa17.52■□□□□ 0.4
SNRPA1-215ENST00000561187 CENPWQ5EE01 88 aa17.52■□□□□ 0.4
SNRPA1-215ENST00000561187 LINC00269Q8N2A0 174 aa17.52■□□□□ 0.4
SNRPA1-215ENST00000561187 PKHD1L1Q86WI1 4243 aa17.52■□□□□ 0.39
SNRPA1-215ENST00000561187 A0A0D9SG52 128 aa17.51■□□□□ 0.39
SNRPA1-215ENST00000561187 VAX2Q9UIW0 290 aa17.51■□□□□ 0.39
SNRPA1-215ENST00000561187 TRBV25-1A0A075B6N4 114 aa17.5■□□□□ 0.39
SNRPA1-215ENST00000561187 HMSDA8MTL9 139 aa17.5■□□□□ 0.39
SNRPA1-215ENST00000561187 PKIAP61925 76 aa17.5■□□□□ 0.39
SNRPA1-215ENST00000561187 IGLV10-54A0A075B6I4 117 aa17.49■□□□□ 0.39
SNRPA1-215ENST00000561187 FER1L6-AS1Q8NA97 138 aa17.49■□□□□ 0.39
SNRPA1-215ENST00000561187 OR2D3Q8NGH3 330 aa17.49■□□□□ 0.39
SNRPA1-215ENST00000561187 TMEM97Q5BJF2 176 aa17.48■□□□□ 0.39
SNRPA1-215ENST00000561187 SUMO4Q6EEV6 95 aa17.48■□□□□ 0.39
SNRPA1-215ENST00000561187 MANBALQ9NQG1 85 aa17.48■□□□□ 0.39
SNRPA1-215ENST00000561187 C11orf52Q96A22 123 aa17.47■□□□□ 0.39
SNRPA1-215ENST00000561187 IGHV1-24A0A0C4DH33 117 aa17.46■□□□□ 0.39
SNRPA1-215ENST00000561187 RAB19A4D1S5 217 aa17.46■□□□□ 0.39
SNRPA1-215ENST00000561187 NKX2-5P52952 324 aaPredicted RBP17.46■□□□□ 0.39
SNRPA1-215ENST00000561187 RPL37AP61513 92 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-215ENST00000561187 DAZAP1Q96EP5 407 aaKnown RBP17.46■□□□□ 0.39
SNRPA1-215ENST00000561187 PRR34Q9NV39 138 aa17.46■□□□□ 0.39
SNRPA1-215ENST00000561187 M0QY20 66 aa17.45■□□□□ 0.38
SNRPA1-215ENST00000561187 IGLC6P0CF74 106 aa17.45■□□□□ 0.38
SNRPA1-215ENST00000561187 EIF5AP63241 154 aaKnown RBP17.45■□□□□ 0.38
SNRPA1-215ENST00000561187 KRTAP26-1Q6PEX3 210 aa17.45■□□□□ 0.38
SNRPA1-215ENST00000561187 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-215ENST00000561187 HMCN2Q8NDA2 5059 aa17.45■□□□□ 0.38
SNRPA1-215ENST00000561187 IQCJQ1A5X6 159 aa17.44■□□□□ 0.38
SNRPA1-215ENST00000561187 PANO1I0J062 215 aa17.43■□□□□ 0.38
SNRPA1-215ENST00000561187 REG3AQ06141 175 aa17.43■□□□□ 0.38
SNRPA1-215ENST00000561187 GNG4P50150 75 aa17.42■□□□□ 0.38
SNRPA1-215ENST00000561187 C19orf71A6NCJ1 209 aa17.41■□□□□ 0.38
SNRPA1-215ENST00000561187 H7C1H1 209 aa17.41■□□□□ 0.38
SNRPA1-215ENST00000561187 RAB5CP51148 216 aa17.41■□□□□ 0.38
SNRPA1-215ENST00000561187 HNRNPA3P51991 378 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-215ENST00000561187 RPS20P60866 119 aaKnown RBP17.41■□□□□ 0.38
SNRPA1-215ENST00000561187 C20orf203Q8NBC4 194 aa17.41■□□□□ 0.38
SNRPA1-215ENST00000561187 GFRA4Q9GZZ7 299 aa17.41■□□□□ 0.38
SNRPA1-215ENST00000561187 C9orf163Q8N9P6 203 aa17.4■□□□□ 0.38
SNRPA1-215ENST00000561187 IGLV4-60A0A075B6I1 120 aa17.39■□□□□ 0.37
SNRPA1-215ENST00000561187 P01737 135 aa17.39■□□□□ 0.37
SNRPA1-215ENST00000561187 CACNG7P62955 275 aa17.39■□□□□ 0.37
SNRPA1-215ENST00000561187 TMEM243Q9BU79 118 aa17.39■□□□□ 0.37
SNRPA1-215ENST00000561187 hDV102S1A0JD36 115 aa17.38■□□□□ 0.37
SNRPA1-215ENST00000561187 DGAT2L7PQ6IED9 249 aa17.38■□□□□ 0.37
SNRPA1-215ENST00000561187 RASL11AQ6T310 242 aa17.38■□□□□ 0.37
SNRPA1-215ENST00000561187 LYZL1Q6UWQ5 148 aa17.38■□□□□ 0.37
SNRPA1-215ENST00000561187 TRBV20OR9-2A0A075B6H5 130 aa17.37■□□□□ 0.37
SNRPA1-215ENST00000561187 MED9Q9NWA0 146 aa17.37■□□□□ 0.37
SNRPA1-215ENST00000561187 TRAV1-1A0A0B4J248 108 aa17.36■□□□□ 0.37
SNRPA1-215ENST00000561187 IFNA1P01562 189 aa17.36■□□□□ 0.37
SNRPA1-215ENST00000561187 MEF2BQ02080 365 aaPredicted RBP17.36■□□□□ 0.37
SNRPA1-215ENST00000561187 OXTP01178 125 aa17.35■□□□□ 0.37
SNRPA1-215ENST00000561187 TRGC1P0CF51 173 aa17.35■□□□□ 0.37
SNRPA1-215ENST00000561187 DPH3P1Q9H4G8 78 aa17.35■□□□□ 0.37
SNRPA1-215ENST00000561187 XKRY2A2RUG3 117 aa17.34■□□□□ 0.37
SNRPA1-215ENST00000561187 TEX46H3BTG2 121 aa17.34■□□□□ 0.37
SNRPA1-215ENST00000561187 IGKV3OR2-268A0A0C4DH90 116 aa17.33■□□□□ 0.36
SNRPA1-215ENST00000561187 UBE2L6O14933 153 aa17.33■□□□□ 0.36
SNRPA1-215ENST00000561187 NTF3P20783 257 aa17.33■□□□□ 0.36
SNRPA1-215ENST00000561187 SDIM1Q6ZPB5 146 aa17.33■□□□□ 0.36
SNRPA1-215ENST00000561187 PDE6DO43924 150 aa17.32■□□□□ 0.36
SNRPA1-215ENST00000561187 AMTP48728 403 aa17.32■□□□□ 0.36
SNRPA1-215ENST00000561187 SULT1A2P50226 295 aa17.32■□□□□ 0.36
SNRPA1-215ENST00000561187 NIT2Q9NQR4 276 aa17.32■□□□□ 0.36
SNRPA1-215ENST00000561187 TRAV26-2A0A0B4J265 109 aa17.31■□□□□ 0.36
SNRPA1-215ENST00000561187 F2Z2F3 143 aa17.31■□□□□ 0.36
SNRPA1-215ENST00000561187 CHTF8P0CG12 524 aa17.31■□□□□ 0.36
SNRPA1-215ENST00000561187 BCL2P10415 239 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms