RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 GAGE12JA6NER3 117 aa6.59□□□□□ -1.35
RABGGTA-221ENST00000561055 K7EP13 123 aa6.59□□□□□ -1.35
RABGGTA-221ENST00000561055 GAGE1Q13065 139 aa6.59□□□□□ -1.35
RABGGTA-221ENST00000561055 GAGE4Q13068 117 aa6.59□□□□□ -1.35
RABGGTA-221ENST00000561055 GAGE5Q13069 117 aa6.59□□□□□ -1.35
RABGGTA-221ENST00000561055 GAGE13Q4V321 117 aa6.59□□□□□ -1.35
RABGGTA-221ENST00000561055 LELP1Q5T871 98 aa6.59□□□□□ -1.35
RABGGTA-221ENST00000561055 SUMO4Q6EEV6 95 aa6.59□□□□□ -1.35
RABGGTA-221ENST00000561055 RASL11AQ6T310 242 aa6.59□□□□□ -1.35
RABGGTA-221ENST00000561055 NBDYA0A0U1RRE5 68 aa6.58□□□□□ -1.36
RABGGTA-221ENST00000561055 SIVA1O15304 175 aa6.58□□□□□ -1.36
RABGGTA-221ENST00000561055 MGPP08493 103 aa6.58□□□□□ -1.36
RABGGTA-221ENST00000561055 BTF3P20290 206 aaKnown RBP6.58□□□□□ -1.36
RABGGTA-221ENST00000561055 GATD1Q8NB37 220 aa6.58□□□□□ -1.36
RABGGTA-221ENST00000561055 IMMP2LQ96T52 175 aa6.58□□□□□ -1.36
RABGGTA-221ENST00000561055 CTDSP1Q9GZU7 261 aa6.58□□□□□ -1.36
RABGGTA-221ENST00000561055 NIT2Q9NQR4 276 aa6.58□□□□□ -1.36
RABGGTA-221ENST00000561055 TMEM242Q9NWH2 141 aa6.58□□□□□ -1.36
RABGGTA-221ENST00000561055 A0A1B0GXF2 115 aa6.57□□□□□ -1.36
RABGGTA-221ENST00000561055 DNAH10OSP0CZ25 163 aa6.57□□□□□ -1.36
RABGGTA-221ENST00000561055 RAB4AP20338 218 aa6.57□□□□□ -1.36
RABGGTA-221ENST00000561055 TTC32Q5I0X7 151 aa6.57□□□□□ -1.36
RABGGTA-221ENST00000561055 ATP5L2Q7Z4Y8 100 aa6.57□□□□□ -1.36
RABGGTA-221ENST00000561055 DAZ4Q86SG3 579 aaKnown RBP6.57□□□□□ -1.36
RABGGTA-221ENST00000561055 RNF185Q96GF1 192 aa6.57□□□□□ -1.36
RABGGTA-221ENST00000561055 DAZ3Q9NR90 486 aaKnown RBP6.57□□□□□ -1.36
RABGGTA-221ENST00000561055 HERC2O95714 4834 aa6.57□□□□□ -1.36
RABGGTA-221ENST00000561055 IGLV2-18A0A075B6J9 118 aa6.56□□□□□ -1.36
RABGGTA-221ENST00000561055 TRAV8-6A0A0B4J262 113 aa6.56□□□□□ -1.36
RABGGTA-221ENST00000561055 TRBV6-5A0A0K0K1A5 114 aa6.56□□□□□ -1.36
RABGGTA-221ENST00000561055 S100A8P05109 93 aa6.56□□□□□ -1.36
RABGGTA-221ENST00000561055 TMEM97Q5BJF2 176 aa6.56□□□□□ -1.36
RABGGTA-221ENST00000561055 WFDC10BQ8IUB3 73 aa6.56□□□□□ -1.36
RABGGTA-221ENST00000561055 MRAP2Q96G30 205 aa6.56□□□□□ -1.36
RABGGTA-221ENST00000561055 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
RABGGTA-221ENST00000561055 TNFRSF18Q9Y5U5 241 aa6.56□□□□□ -1.36
RABGGTA-221ENST00000561055 RYR1P21817 5038 aa6.55□□□□□ -1.36
RABGGTA-221ENST00000561055 TRAV9-1A0A075B6T8 112 aa6.55□□□□□ -1.36
RABGGTA-221ENST00000561055 TRBV6-8A0A0A6YYG3 113 aa6.55□□□□□ -1.36
RABGGTA-221ENST00000561055 IGHV3-38A0A0C4DH36 116 aa6.55□□□□□ -1.36
RABGGTA-221ENST00000561055 C7orf77A4D0Y5 90 aa6.55□□□□□ -1.36
RABGGTA-221ENST00000561055 HBBP68871 147 aa6.55□□□□□ -1.36
RABGGTA-221ENST00000561055 LINC01556Q5JQF7 62 aa6.55□□□□□ -1.36
RABGGTA-221ENST00000561055 FAM104BQ5XKR9 115 aa6.55□□□□□ -1.36
RABGGTA-221ENST00000561055 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.55□□□□□ -1.36
RABGGTA-221ENST00000561055 FRAS1Q86XX4 4008 aa6.54□□□□□ -1.36
RABGGTA-221ENST00000561055 TRAV9-2A0A087WT02 112 aa6.54□□□□□ -1.36
RABGGTA-221ENST00000561055 M0R2N4 97 aa6.54□□□□□ -1.36
RABGGTA-221ENST00000561055 RHEBQ15382 184 aa6.54□□□□□ -1.36
RABGGTA-221ENST00000561055 OR10J3Q5JRS4 329 aa6.54□□□□□ -1.36
RABGGTA-221ENST00000561055 AMN1Q8IY45 258 aa6.54□□□□□ -1.36
RABGGTA-221ENST00000561055 CLRN3Q8NCR9 226 aa6.54□□□□□ -1.36
RABGGTA-221ENST00000561055 BTF3L4Q96K17 158 aa6.54□□□□□ -1.36
RABGGTA-221ENST00000561055 KRTAP1-5Q9BYS1 174 aa6.54□□□□□ -1.36
RABGGTA-221ENST00000561055 TRBV24-1A0A075B6N3 115 aa6.53□□□□□ -1.36
RABGGTA-221ENST00000561055 TRAV26-2A0A0B4J265 109 aa6.53□□□□□ -1.36
RABGGTA-221ENST00000561055 PPP1R17O96001 155 aa6.53□□□□□ -1.36
RABGGTA-221ENST00000561055 CAMPP49913 170 aa6.53□□□□□ -1.36
RABGGTA-221ENST00000561055 MRPL54Q6P161 138 aaKnown RBP6.53□□□□□ -1.36
RABGGTA-221ENST00000561055 NTM-AS1Q6ZSK4 140 aa6.53□□□□□ -1.36
RABGGTA-221ENST00000561055 C10orf126Q8N4M7 172 aa6.53□□□□□ -1.36
RABGGTA-221ENST00000561055 CHCHD7Q9BUK0 85 aa6.53□□□□□ -1.36
RABGGTA-221ENST00000561055 RTL8CO15255 209 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 GAS8-AS1O95177 125 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 SNAPINO95295 136 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 POLR2KP53803 58 aaKnown RBP6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 NDUFA5Q16718 116 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 IQCJQ1A5X6 159 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 MRPL51Q4U2R6 128 aaKnown RBP6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 C1orf134Q5TEV5 83 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 KCNIP4Q6PIL6 250 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 LINC00336Q6ZUF6 198 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 NIT1Q86X76 327 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 SVBPQ8N300 66 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 C6orf223Q8N319 242 aa6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 RPL39LQ96EH5 51 aaKnown RBP6.52□□□□□ -1.37
RABGGTA-221ENST00000561055 DNAH10Q8IVF4 4471 aa6.51□□□□□ -1.37
RABGGTA-221ENST00000561055 SDHAF1A6NFY7 115 aa6.51□□□□□ -1.37
RABGGTA-221ENST00000561055 IBA57-AS1B1ANH7 110 aa6.51□□□□□ -1.37
RABGGTA-221ENST00000561055 NCR2O95944 276 aa6.51□□□□□ -1.37
RABGGTA-221ENST00000561055 APOC3P02656 99 aa6.51□□□□□ -1.37
RABGGTA-221ENST00000561055 PPBPP02775 128 aa6.51□□□□□ -1.37
RABGGTA-221ENST00000561055 RPS10P46783 165 aaKnown RBP6.51□□□□□ -1.37
RABGGTA-221ENST00000561055 PKIAP61925 76 aa6.51□□□□□ -1.37
RABGGTA-221ENST00000561055 NRACQ8N912 160 aa6.51□□□□□ -1.37
RABGGTA-221ENST00000561055 DNAH2Q9P225 4427 aa6.51□□□□□ -1.37
RABGGTA-221ENST00000561055 TRBV25-1A0A075B6N4 114 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 IGHV1-24A0A0C4DH33 117 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 TRBV27A0A0K0K1C4 114 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 PHOX2AO14813 284 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 S100PP25815 95 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 RPL32P62910 135 aaKnown RBP6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 COTL1Q14019 142 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 LAGE3Q14657 143 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 SLC7A5P1Q8MH63 180 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 C20orf78Q9BR46 151 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 TMEM70Q9BUB7 260 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 ST20Q9HBF5 79 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 RPS10P5Q9NQ39 176 aa6.5□□□□□ -1.37
RABGGTA-221ENST00000561055 DNAH17Q9UFH2 4485 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms