RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 NOP10Q9NPE3 64 aaKnown RBP12.3□□□□□ -0.44
HDDC3-206ENST00000561036 SDHAF1A6NFY7 115 aa12.29□□□□□ -0.44
HDDC3-206ENST00000561036 LINC01549A6NIU2 74 aa12.29□□□□□ -0.44
HDDC3-206ENST00000561036 Q6ZTI0 123 aa12.29□□□□□ -0.44
HDDC3-206ENST00000561036 DNAJC30Q96LL9 226 aa12.29□□□□□ -0.44
HDDC3-206ENST00000561036 KIR2DL4Q99706 377 aa12.29□□□□□ -0.44
HDDC3-206ENST00000561036 A8MZ25 164 aa12.28□□□□□ -0.44
HDDC3-206ENST00000561036 NUDT3O95989 172 aa12.28□□□□□ -0.44
HDDC3-206ENST00000561036 IGHV4-30-4P0DP06 118 aa12.28□□□□□ -0.44
HDDC3-206ENST00000561036 IFI27L1Q96BM0 104 aa12.28□□□□□ -0.44
HDDC3-206ENST00000561036 X6R8D5 127 aa12.28□□□□□ -0.44
HDDC3-206ENST00000561036 ATP5LO75964 103 aa12.27□□□□□ -0.45
HDDC3-206ENST00000561036 KRTAP10-11P60412 298 aa12.27□□□□□ -0.45
HDDC3-206ENST00000561036 VWFP04275 2813 aa12.27□□□□□ -0.45
HDDC3-206ENST00000561036 IGHV3-73A0A0B4J1V6 119 aa12.26□□□□□ -0.45
HDDC3-206ENST00000561036 RHOHQ15669 191 aa12.26□□□□□ -0.45
HDDC3-206ENST00000561036 FBN1P35555 2871 aaKnown RBP12.26□□□□□ -0.45
HDDC3-206ENST00000561036 NOTCH3Q9UM47 2321 aa12.25□□□□□ -0.45
HDDC3-206ENST00000561036 I3L3M4 83 aa12.25□□□□□ -0.45
HDDC3-206ENST00000561036 LINC01545Q5VT33 79 aa12.25□□□□□ -0.45
HDDC3-206ENST00000561036 Q6ZSN1 163 aa12.25□□□□□ -0.45
HDDC3-206ENST00000561036 LINC00612Q8N6U2 182 aa12.25□□□□□ -0.45
HDDC3-206ENST00000561036 TOMM6Q96B49 74 aa12.25□□□□□ -0.45
HDDC3-206ENST00000561036 C18orf15Q96N68 181 aa12.25□□□□□ -0.45
HDDC3-206ENST00000561036 TNFRSF18Q9Y5U5 241 aa12.25□□□□□ -0.45
HDDC3-206ENST00000561036 TRBV10-1A0A0K0K1A3 114 aa12.24□□□□□ -0.45
HDDC3-206ENST00000561036 PKIAP61925 76 aa12.24□□□□□ -0.45
HDDC3-206ENST00000561036 TRGV2A0A075B6R0 118 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 GAGE12BA1L429 117 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 GAGE7O76087 117 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 RIPPLY3P57055 190 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 LGALS9CQ6DKI2 356 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 RNF183Q96D59 192 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 ZNF479Q96JC4 524 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 VAMP8Q9BV40 100 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 NACAE9PAV3 2078 aa12.23□□□□□ -0.45
HDDC3-206ENST00000561036 LYRM9A8MSI8 78 aa12.22□□□□□ -0.45
HDDC3-206ENST00000561036 MIFP14174 115 aa12.22□□□□□ -0.45
HDDC3-206ENST00000561036 DEFB135Q30KP9 77 aa12.22□□□□□ -0.45
HDDC3-206ENST00000561036 SAMD5Q5TGI4 173 aa12.22□□□□□ -0.45
HDDC3-206ENST00000561036 NEGR1Q7Z3B1 354 aa12.22□□□□□ -0.45
HDDC3-206ENST00000561036 ZNF664Q8N3J9 261 aa12.22□□□□□ -0.45
HDDC3-206ENST00000561036 OR11H2Q8NH07 326 aa12.22□□□□□ -0.45
HDDC3-206ENST00000561036 CYSLTR1Q9Y271 337 aa12.22□□□□□ -0.45
HDDC3-206ENST00000561036 TSTD3H0UI37 97 aa12.21□□□□□ -0.45
HDDC3-206ENST00000561036 TSHBP01222 138 aa12.21□□□□□ -0.45
HDDC3-206ENST00000561036 P0DMU3 169 aa12.21□□□□□ -0.45
HDDC3-206ENST00000561036 FAM231AP0DMU4 169 aa12.21□□□□□ -0.45
HDDC3-206ENST00000561036 FAM231CP0DMU5 169 aa12.21□□□□□ -0.45
HDDC3-206ENST00000561036 C2orf66Q6UXQ4 117 aa12.21□□□□□ -0.45
HDDC3-206ENST00000561036 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.2□□□□□ -0.46
HDDC3-206ENST00000561036 K7EQD1 137 aa12.2□□□□□ -0.46
HDDC3-206ENST00000561036 ERASQ7Z444 233 aa12.2□□□□□ -0.46
HDDC3-206ENST00000561036 SCGB3A1Q96QR1 104 aa12.2□□□□□ -0.46
HDDC3-206ENST00000561036 TRAV9-2A0A087WT02 112 aa12.19□□□□□ -0.46
HDDC3-206ENST00000561036 TRBV6-4A0A1B0GX49 114 aa12.19□□□□□ -0.46
HDDC3-206ENST00000561036 PCP4L1A6NKN8 68 aa12.19□□□□□ -0.46
HDDC3-206ENST00000561036 EMP1P54849 157 aa12.19□□□□□ -0.46
HDDC3-206ENST00000561036 TP53TG1Q9Y2A0 90 aa12.19□□□□□ -0.46
HDDC3-206ENST00000561036 G3V4G9 280 aa12.18□□□□□ -0.46
HDDC3-206ENST00000561036 H0Y8G0 127 aa12.18□□□□□ -0.46
HDDC3-206ENST00000561036 PRSS1P07477 247 aa12.18□□□□□ -0.46
HDDC3-206ENST00000561036 RPL36AP83881 106 aaKnown RBP12.18□□□□□ -0.46
HDDC3-206ENST00000561036 RPL36ALQ969Q0 106 aaKnown RBP12.18□□□□□ -0.46
HDDC3-206ENST00000561036 TMEM141Q96I45 108 aa12.18□□□□□ -0.46
HDDC3-206ENST00000561036 ZMAT4Q9H898 229 aa12.18□□□□□ -0.46
HDDC3-206ENST00000561036 TRBV7-3A0A075B6L6 115 aa12.17□□□□□ -0.46
HDDC3-206ENST00000561036 Q6ZN92 141 aa12.17□□□□□ -0.46
HDDC3-206ENST00000561036 SLC25A29Q8N8R3 303 aa12.17□□□□□ -0.46
HDDC3-206ENST00000561036 Q8NAQ8 132 aa12.17□□□□□ -0.46
HDDC3-206ENST00000561036 PAM16Q9Y3D7 125 aa12.17□□□□□ -0.46
HDDC3-206ENST00000561036 TRAV12-1A0A0B4J245 112 aa12.16□□□□□ -0.46
HDDC3-206ENST00000561036 TRGV4A0A0C4DH28 118 aa12.16□□□□□ -0.46
HDDC3-206ENST00000561036 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
HDDC3-206ENST00000561036 FHL2Q14192 279 aa12.16□□□□□ -0.46
HDDC3-206ENST00000561036 ATOH7Q8N100 152 aa12.16□□□□□ -0.46
HDDC3-206ENST00000561036 C20orf203Q8NBC4 194 aa12.16□□□□□ -0.46
HDDC3-206ENST00000561036 TIMM17AQ99595 171 aa12.16□□□□□ -0.46
HDDC3-206ENST00000561036 IGIPA6NJ69 53 aa12.15□□□□□ -0.46
HDDC3-206ENST00000561036 ODF1Q14990 250 aa12.15□□□□□ -0.46
HDDC3-206ENST00000561036 SPATA45Q537H7 98 aa12.15□□□□□ -0.46
HDDC3-206ENST00000561036 DAZ4Q86SG3 579 aaKnown RBP12.15□□□□□ -0.46
HDDC3-206ENST00000561036 PRO1933Q9H354 126 aa12.15□□□□□ -0.46
HDDC3-206ENST00000561036 DAZ3Q9NR90 486 aaKnown RBP12.15□□□□□ -0.46
HDDC3-206ENST00000561036 DKK2Q9UBU2 259 aa12.15□□□□□ -0.46
HDDC3-206ENST00000561036 Q9UF83 564 aa12.15□□□□□ -0.46
HDDC3-206ENST00000561036 STAB1Q9NY15 2570 aa12.14□□□□□ -0.47
HDDC3-206ENST00000561036 A0A087WX48 190 aa12.14□□□□□ -0.47
HDDC3-206ENST00000561036 HSBP1L1C9JCN9 74 aa12.14□□□□□ -0.47
HDDC3-206ENST00000561036 DEFB130BP0DP73 79 aa12.14□□□□□ -0.47
HDDC3-206ENST00000561036 DEFB130AP0DP74 79 aa12.14□□□□□ -0.47
HDDC3-206ENST00000561036 COTL1Q14019 142 aa12.14□□□□□ -0.47
HDDC3-206ENST00000561036 FAM222AQ5U5X8 452 aa12.14□□□□□ -0.47
HDDC3-206ENST00000561036 ZNRF2Q8NHG8 242 aa12.14□□□□□ -0.47
HDDC3-206ENST00000561036 PRADC1Q9BSG0 188 aa12.14□□□□□ -0.47
HDDC3-206ENST00000561036 TEX48A0A1B0GUV7 120 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms