RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 EMP1P54849 157 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 TWIST1Q15672 202 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 FAM104BQ5XKR9 115 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 TMEM88Q6PEY1 159 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 Q6ZSN1 163 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 C11orf45Q8TAV5 145 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 BORCS7Q96B45 105 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 ZNF479Q96JC4 524 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 AP1S3Q96PC3 154 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 TPPP3Q9BW30 176 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 KRTAP1-5Q9BYS1 174 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 DPH3P1Q9H4G8 78 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 URGCP-MRPS24S4R325 110 aa3.84□□□□□ -1.79
ZEB1-220ENST00000560909 STARD9Q9P2P6 4700 aa3.84□□□□□ -1.8
ZEB1-220ENST00000560909 CSMD3Q7Z407 3707 aa3.84□□□□□ -1.8
ZEB1-220ENST00000560909 TRGV2A0A075B6R0 118 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 TGIF2-C20orf24A0A0A6YYL0 155 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 TRBV6-4A0A1B0GX49 114 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 H3BNG1 76 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 M0QY20 66 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 SCO1O75880 301 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 MT-ND6P03923 174 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 ATP5G1P05496 136 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 LINC00694P0DN24 101 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 DEFB130BP0DP73 79 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 DEFB130AP0DP74 79 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 RAB4BP61018 213 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 DAD1P61803 113 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 SLAQ13239 276 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 MRPL54Q6P161 138 aaKnown RBP3.83□□□□□ -1.8
ZEB1-220ENST00000560909 C14orf178Q8N769 122 aaPredicted RBP3.83□□□□□ -1.8
ZEB1-220ENST00000560909 OR4C5Q8NGB2 326 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 FAM210BQ96KR6 192 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 DNAH1Q9P2D7 4330 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 NACAE9PAV3 2078 aa3.83□□□□□ -1.8
ZEB1-220ENST00000560909 A0A087WWL8 130 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 TRBV10-1A0A0K0K1A3 114 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 TRBV6-5A0A0K0K1A5 114 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 PRSS47A8MTI9 375 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 HLA-DQA1P01909 254 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 PPBPP02775 128 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 RAB5AP20339 215 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 CAMPP49913 170 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 CRYBA4P53673 196 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 NANOS2P60321 138 aaKnown RBP3.82□□□□□ -1.8
ZEB1-220ENST00000560909 RPL32P62910 135 aaKnown RBP3.82□□□□□ -1.8
ZEB1-220ENST00000560909 MRPL51Q4U2R6 128 aaKnown RBP3.82□□□□□ -1.8
ZEB1-220ENST00000560909 Q6ZTC4 211 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 SMIM15Q7Z3B0 74 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 AMN1Q8IY45 258 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 NRACQ8N912 160 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 MRAP2Q96G30 205 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 VSIG2Q96IQ7 327 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 PRO0255Q9UI72 69 aa3.82□□□□□ -1.8
ZEB1-220ENST00000560909 RYR3Q15413 4870 aa3.81□□□□□ -1.8
ZEB1-220ENST00000560909 TRAV10A0A0B4J240 114 aa3.81□□□□□ -1.8
ZEB1-220ENST00000560909 PPP1R17O96001 155 aa3.81□□□□□ -1.8
ZEB1-220ENST00000560909 POLR2KP53803 58 aaKnown RBP3.81□□□□□ -1.8
ZEB1-220ENST00000560909 TIRAPP58753 221 aa3.81□□□□□ -1.8
ZEB1-220ENST00000560909 SUMO4Q6EEV6 95 aa3.81□□□□□ -1.8
ZEB1-220ENST00000560909 SLC25A29Q8N8R3 303 aa3.81□□□□□ -1.8
ZEB1-220ENST00000560909 DNAJC30Q96LL9 226 aa3.81□□□□□ -1.8
ZEB1-220ENST00000560909 Q9UF83 564 aa3.81□□□□□ -1.8
ZEB1-220ENST00000560909 HHLA3Q9XRX5 114 aa3.81□□□□□ -1.8
ZEB1-220ENST00000560909 LAMTOR2Q9Y2Q5 125 aa3.81□□□□□ -1.8
ZEB1-220ENST00000560909 TRAV26-1A0A087WT03 109 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 DEFB131BA0A096LNP1 70 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 H7C1H1 209 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 K7EQD1 137 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 GAS8-AS1O95177 125 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 APCSP02743 223 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 SMIM17P0DL12 118 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 UBE2D3P61077 147 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 SSTP61278 116 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 UBE2D2P62837 147 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 RHOHQ15669 191 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 ORMDL3Q8N138 153 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 NEXN-AS1Q8NBZ9 246 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 PHLDA1Q8WV24 401 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-220ENST00000560909 C20orf78Q9BR46 151 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 ALKBH7Q9BT30 221 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-220ENST00000560909 NIT2Q9NQR4 276 aa3.8□□□□□ -1.8
ZEB1-220ENST00000560909 IGLV2-18A0A075B6J9 118 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 TRBV7-3A0A075B6L6 115 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 IGHV3-73A0A0B4J1V6 119 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 TRAV26-2A0A0B4J265 109 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 TRGV4A0A0C4DH28 118 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 TRBV27A0A0K0K1C4 114 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 LINC01546A6NGU7 62 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 D6R8Y8 96 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 F5H768 121 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 P0DMU3 169 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 FAM231AP0DMU4 169 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 FAM231CP0DMU5 169 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 CKS2P33552 79 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 RPS10P46783 165 aaKnown RBP3.79□□□□□ -1.8
ZEB1-220ENST00000560909 TCTAP57738 103 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 FABP9Q0Z7S8 132 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 FAM74A4Q5TZK3 123 aa3.79□□□□□ -1.8
ZEB1-220ENST00000560909 CEMP1Q6PRD7 247 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms