RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 LINC01549A6NIU2 74 aa9.29□□□□□ -0.92
SNX1-211ENST00000560829 SPATA45Q537H7 98 aa9.29□□□□□ -0.92
SNX1-211ENST00000560829 C18orf15Q96N68 181 aa9.29□□□□□ -0.92
SNX1-211ENST00000560829 KIR2DL4Q99706 377 aa9.29□□□□□ -0.92
SNX1-211ENST00000560829 ATRQ13535 2644 aa9.28□□□□□ -0.92
SNX1-211ENST00000560829 H0Y8G0 127 aa9.28□□□□□ -0.92
SNX1-211ENST00000560829 IGHV3-53P01767 116 aa9.28□□□□□ -0.92
SNX1-211ENST00000560829 G0S2P27469 103 aa9.28□□□□□ -0.92
SNX1-211ENST00000560829 RRN3P1Q2M238 152 aa9.28□□□□□ -0.92
SNX1-211ENST00000560829 SHISA2Q6UWI4 295 aa9.28□□□□□ -0.92
SNX1-211ENST00000560829 OVOL2Q9BRP0 275 aa9.28□□□□□ -0.92
SNX1-211ENST00000560829 TRGV1A0A0A0MS02 117 aa9.28□□□□□ -0.92
SNX1-211ENST00000560829 NEGR1Q7Z3B1 354 aa9.28□□□□□ -0.92
SNX1-211ENST00000560829 KIR2DL5BQ8NHK3 375 aa9.28□□□□□ -0.92
SNX1-211ENST00000560829 IGHV3-73A0A0B4J1V6 119 aa9.27□□□□□ -0.93
SNX1-211ENST00000560829 RIPPLY3P57055 190 aa9.27□□□□□ -0.93
SNX1-211ENST00000560829 MAJINQ3KP22 176 aa9.27□□□□□ -0.93
SNX1-211ENST00000560829 C2orf66Q6UXQ4 117 aa9.27□□□□□ -0.93
SNX1-211ENST00000560829 C3orf56Q8N813 242 aa9.27□□□□□ -0.93
SNX1-211ENST00000560829 TRAV4A0A0B4J268 109 aa9.26□□□□□ -0.93
SNX1-211ENST00000560829 RHOHQ15669 191 aa9.26□□□□□ -0.93
SNX1-211ENST00000560829 Q6ZSN1 163 aa9.26□□□□□ -0.93
SNX1-211ENST00000560829 Q6ZTI0 123 aa9.26□□□□□ -0.93
SNX1-211ENST00000560829 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.25□□□□□ -0.93
SNX1-211ENST00000560829 I3L3M4 83 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 OR4C5Q8NGB2 326 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 DNAJC30Q96LL9 226 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 PMCHL2Q9BQD1 86 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 MIEN1Q9BRT3 115 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 NOP10Q9NPE3 64 aaKnown RBP9.25□□□□□ -0.93
SNX1-211ENST00000560829 CIDEAO60543 219 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 IGLC3P0DOY3 106 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 ODF1Q14990 250 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 ERASQ7Z444 233 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 SCGB3A1Q96QR1 104 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 ZMAT4Q9H898 229 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 CYSLTR1Q9Y271 337 aa9.25□□□□□ -0.93
SNX1-211ENST00000560829 SMIM9A6NGZ8 99 aa9.24□□□□□ -0.93
SNX1-211ENST00000560829 TSHBP01222 138 aa9.24□□□□□ -0.93
SNX1-211ENST00000560829 PRSS1P07477 247 aa9.24□□□□□ -0.93
SNX1-211ENST00000560829 P0DMU3 169 aa9.24□□□□□ -0.93
SNX1-211ENST00000560829 FAM231AP0DMU4 169 aa9.24□□□□□ -0.93
SNX1-211ENST00000560829 FAM231CP0DMU5 169 aa9.24□□□□□ -0.93
SNX1-211ENST00000560829 C12orf54Q6X4T0 127 aa9.24□□□□□ -0.93
SNX1-211ENST00000560829 NEXN-AS1Q8NBZ9 246 aa9.24□□□□□ -0.93
SNX1-211ENST00000560829 TNFRSF18Q9Y5U5 241 aa9.24□□□□□ -0.93
SNX1-211ENST00000560829 FBN1P35555 2871 aaKnown RBP9.24□□□□□ -0.93
SNX1-211ENST00000560829 TRAV12-1A0A0B4J245 112 aa9.23□□□□□ -0.93
SNX1-211ENST00000560829 hDV102S1A0JD36 115 aa9.23□□□□□ -0.93
SNX1-211ENST00000560829 HSBP1L1C9JCN9 74 aa9.23□□□□□ -0.93
SNX1-211ENST00000560829 APOC4P55056 127 aa9.23□□□□□ -0.93
SNX1-211ENST00000560829 ZNF479Q96JC4 524 aa9.23□□□□□ -0.93
SNX1-211ENST00000560829 DKK2Q9UBU2 259 aa9.23□□□□□ -0.93
SNX1-211ENST00000560829 X6R8D5 127 aa9.23□□□□□ -0.93
SNX1-211ENST00000560829 UQCR10Q9UDW1 63 aa9.23□□□□□ -0.93
SNX1-211ENST00000560829 TP53TG1Q9Y2A0 90 aa9.23□□□□□ -0.93
SNX1-211ENST00000560829 A0A087WX48 190 aa9.22□□□□□ -0.93
SNX1-211ENST00000560829 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
SNX1-211ENST00000560829 IGIPA6NJ69 53 aa9.22□□□□□ -0.93
SNX1-211ENST00000560829 DEFA6Q01524 100 aa9.22□□□□□ -0.93
SNX1-211ENST00000560829 Q6ZN92 141 aa9.22□□□□□ -0.93
SNX1-211ENST00000560829 C14orf144Q96I85 54 aa9.22□□□□□ -0.93
SNX1-211ENST00000560829 TIMM17AQ99595 171 aa9.22□□□□□ -0.93
SNX1-211ENST00000560829 LINC00612Q8N6U2 182 aa9.21□□□□□ -0.93
SNX1-211ENST00000560829 TMEM141Q96I45 108 aa9.21□□□□□ -0.93
SNX1-211ENST00000560829 Q9UF83 564 aa9.21□□□□□ -0.93
SNX1-211ENST00000560829 CMYA5Q8N3K9 4069 aa9.21□□□□□ -0.94
SNX1-211ENST00000560829 EGFEM1PQ0D2K5 195 aa9.21□□□□□ -0.94
SNX1-211ENST00000560829 C20orf203Q8NBC4 194 aa9.21□□□□□ -0.94
SNX1-211ENST00000560829 BAALCQ8WXS3 180 aa9.21□□□□□ -0.94
SNX1-211ENST00000560829 GAGE12BA1L429 117 aa9.2□□□□□ -0.94
SNX1-211ENST00000560829 GAGE7O76087 117 aa9.2□□□□□ -0.94
SNX1-211ENST00000560829 GAGE12FP0CL80 117 aa9.2□□□□□ -0.94
SNX1-211ENST00000560829 GAGE12GP0CL81 117 aa9.2□□□□□ -0.94
SNX1-211ENST00000560829 GAGE12IP0CL82 117 aa9.2□□□□□ -0.94
SNX1-211ENST00000560829 TRGV2A0A075B6R0 118 aa9.19□□□□□ -0.94
SNX1-211ENST00000560829 K7EQD1 137 aa9.19□□□□□ -0.94
SNX1-211ENST00000560829 DPM2O94777 84 aa9.19□□□□□ -0.94
SNX1-211ENST00000560829 IGKCP01834 107 aa9.19□□□□□ -0.94
SNX1-211ENST00000560829 IGHV4-30-4P0DP06 118 aa9.19□□□□□ -0.94
SNX1-211ENST00000560829 RPL39P62891 51 aaKnown RBP9.19□□□□□ -0.94
SNX1-211ENST00000560829 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
SNX1-211ENST00000560829 MRPL35Q9NZE8 188 aaKnown RBP9.19□□□□□ -0.94
SNX1-211ENST00000560829 F8VRH5 84 aa9.19□□□□□ -0.94
SNX1-211ENST00000560829 DEFB104AQ8WTQ1 72 aa9.19□□□□□ -0.94
SNX1-211ENST00000560829 HHLA3Q9XRX5 114 aa9.19□□□□□ -0.94
SNX1-211ENST00000560829 NOTCH3Q9UM47 2321 aa9.18□□□□□ -0.94
SNX1-211ENST00000560829 TRBV7-3A0A075B6L6 115 aa9.18□□□□□ -0.94
SNX1-211ENST00000560829 TRBV6-4A0A1B0GX49 114 aa9.18□□□□□ -0.94
SNX1-211ENST00000560829 PLNP26678 52 aa9.18□□□□□ -0.94
SNX1-211ENST00000560829 ANKRD39Q53RE8 183 aa9.18□□□□□ -0.94
SNX1-211ENST00000560829 SLC25A29Q8N8R3 303 aa9.18□□□□□ -0.94
SNX1-211ENST00000560829 ZMAT5Q9UDW3 170 aaKnown RBP9.18□□□□□ -0.94
SNX1-211ENST00000560829 A8MZ25 164 aa9.17□□□□□ -0.94
SNX1-211ENST00000560829 KRTAP10-11P60412 298 aa9.17□□□□□ -0.94
SNX1-211ENST00000560829 RPL36AP83881 106 aaKnown RBP9.17□□□□□ -0.94
SNX1-211ENST00000560829 DEFB135Q30KP9 77 aa9.17□□□□□ -0.94
SNX1-211ENST00000560829 MRPL52Q86TS9 123 aaKnown RBP9.17□□□□□ -0.94
SNX1-211ENST00000560829 RPL36ALQ969Q0 106 aaKnown RBP9.17□□□□□ -0.94
SNX1-211ENST00000560829 CHTOPQ9Y3Y2 248 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms