RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 EDDM3BP56851 147 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 UBE2G1P62253 170 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 SPANXN1Q5VSR9 72 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 ZNF818PQ6ZRF7 136 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 Q6ZUT4 128 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 C10orf82Q8WW14 230 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 CYP4F30PQ9H0H9 118 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 SCP2D1Q9UJQ7 156 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 VWFP04275 2813 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 NRXN2Q9P2S2 1712 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 CDK5RAP2Q96SN8 1893 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 DOCK11Q5JSL3 2073 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 MUC22E2RYF6 1773 aaPredicted RBP-0.09□□□□□ -2.42
SPG11-222ENST00000560435 CEP152O94986 1710 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 FAM208BQ5VWN6 2430 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 FHAD1B1AJZ9 1412 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 DAPK1P53355 1430 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 M0R129 80 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 M0R2Z0 102 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 NDUFB6O95139 128 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 IFNA17P01571 189 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 ACYP2P14621 99 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 CBLN1P23435 193 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 GUCA1AP43080 201 aaPredicted RBP-0.09□□□□□ -2.42
SPG11-222ENST00000560435 RRAS2P62070 204 aaPredicted RBP-0.09□□□□□ -2.42
SPG11-222ENST00000560435 RPS25P62851 125 aaKnown RBP-0.09□□□□□ -2.42
SPG11-222ENST00000560435 CCL8P80075 99 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 SSBP3-AS1Q7Z2R9 100 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 FAM213BQ8TBF2 198 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 MAFIPQ8WZ33 124 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 ANP32BQ92688 251 aaKnown RBP-0.09□□□□□ -2.42
SPG11-222ENST00000560435 DPH3Q96FX2 82 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 SMIM3Q9BZL3 60 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 TMEM191AQ9H0A3 160 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 RPRMQ9NS64 109 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 TENM2Q9NT68 2774 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 MYH13Q9UKX3 1938 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 HMCN2Q8NDA2 5059 aa-0.09□□□□□ -2.42
SPG11-222ENST00000560435 GOLGA3Q08378 1498 aa-0.1□□□□□ -2.42
SPG11-222ENST00000560435 IFT140Q96RY7 1462 aa-0.1□□□□□ -2.42
SPG11-222ENST00000560435 WNK2Q9Y3S1 2297 aa-0.1□□□□□ -2.42
SPG11-222ENST00000560435 CSMD3Q7Z407 3707 aa-0.1□□□□□ -2.42
SPG11-222ENST00000560435 DCHS2Q6V1P9 2916 aa-0.1□□□□□ -2.42
SPG11-222ENST00000560435 PIEZO2Q9H5I5 2752 aa-0.1□□□□□ -2.42
SPG11-222ENST00000560435 TRAV1-2A0A0B4J238 106 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 SPAARA0A1B0GVQ0 90 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 A6NIN4 97 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 ZNF815PA8K554 130 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 C10orf142B7Z368 130 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 APOC4-APOC2K7ER74 178 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 K7ERU9 68 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 PIN1P1O15428 100 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 SIX6O95475 246 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 IL5P05113 134 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 SPINK8P0C7L1 97 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 PIPP12273 146 aaPredicted RBP-0.1□□□□□ -2.43
SPG11-222ENST00000560435 GCHFRP30047 84 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 COPZ1P61923 177 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 SMIM21Q3B7S5 101 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 UBE2DNLQ8IWF7 75 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 LZICQ8WZA0 190 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 PSMG3Q9BT73 122 aaPredicted RBP-0.1□□□□□ -2.43
SPG11-222ENST00000560435 COPZ2Q9P299 210 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 PAIP2BQ9ULR5 123 aaKnown RBP-0.1□□□□□ -2.43
SPG11-222ENST00000560435 LINC00312Q9Y6C7 94 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 SIPA1L3O60292 1781 aaPredicted RBP-0.1□□□□□ -2.43
SPG11-222ENST00000560435 AHCTF1Q8WYP5 2266 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 SPTBN2O15020 2390 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 PXDNQ92626 1479 aa-0.1□□□□□ -2.43
SPG11-222ENST00000560435 MAP1AP78559 2803 aaPredicted RBP-0.1□□□□□ -2.43
SPG11-222ENST00000560435 NCOR1O75376 2440 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 MYH6P13533 1939 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 PTPN13Q12923 2485 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 SETXQ7Z333 2677 aaKnown RBP-0.11□□□□□ -2.43
SPG11-222ENST00000560435 LRRC37A3O60309 1634 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 A0A0D9SFI3 127 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 HCG22E2RYF7 251 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 CCL18P55774 89 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 SELENOWP63302 87 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 WFDC2Q14508 124 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 RPL7L1Q6DKI1 246 aaKnown RBP-0.11□□□□□ -2.43
SPG11-222ENST00000560435 BAGE3Q86Y29 109 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 KCNRGQ8N5I3 272 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 SPTSSBQ8NFR3 76 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 TSTD1Q8NFU3 115 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 SPTSSAQ969W0 71 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 TCEAL4Q96EI5 215 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 CNFNQ9BYD5 112 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 AGPAT4-IT1Q9H0P7 198 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 RERGLQ9H628 205 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 LINC00472Q9H8W2 130 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 TPT1P8Q9HAU6 139 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 CCDC167Q9P0B6 97 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 PARP14Q460N5 1801 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 ZNF518AQ6AHZ1 1483 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 C2CD3Q4AC94 2353 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 ZANQ9Y493 2812 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 STAB1Q9NY15 2570 aa-0.11□□□□□ -2.43
SPG11-222ENST00000560435 AKAP6Q13023 2319 aa-0.12□□□□□ -2.43
SPG11-222ENST00000560435 PTPRQQ9UMZ3 2332 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms