RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
CARMIL3-203ENST00000560349 A6NDN8 102 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 F5H697 171 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 H3BUT2 72 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 DUSP14O95147 198 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 HLA-DRB4P13762 266 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 FHL3Q13643 280 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 UFSP1Q6NVU6 142 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 TTTY13Q9BZ97 58 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 WFDC10AQ9H1F0 79 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 NXT2Q9NPJ8 142 aaKnown RBP10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 PGPEP1Q9NXJ5 209 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 ZNF256Q9Y2P7 627 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 TSSC4Q9Y5U2 329 aaPredicted RBP10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 HLA-DRB4X5D2U9 266 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 F8P00451 2351 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 SIGMAR1Q99720 223 aa10.37□□□□□ -0.75
CARMIL3-203ENST00000560349 ODF3L2Q3SX64 289 aa10.36□□□□□ -0.75
CARMIL3-203ENST00000560349 RAB37Q96AX2 223 aa10.36□□□□□ -0.75
CARMIL3-203ENST00000560349 PRSS1P07477 247 aa10.36□□□□□ -0.75
CARMIL3-203ENST00000560349 Q8N8P6 123 aa10.36□□□□□ -0.75
CARMIL3-203ENST00000560349 IGHV3OR16-12A0A075B7B8 117 aa10.35□□□□□ -0.75
CARMIL3-203ENST00000560349 IGHV3-73A0A0B4J1V6 119 aa10.35□□□□□ -0.75
CARMIL3-203ENST00000560349 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
CARMIL3-203ENST00000560349 ODF3Q96PU9 254 aa10.35□□□□□ -0.75
CARMIL3-203ENST00000560349 LINC00315P59091 139 aa10.35□□□□□ -0.75
CARMIL3-203ENST00000560349 KRTAP10-3P60369 221 aa10.35□□□□□ -0.75
CARMIL3-203ENST00000560349 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
CARMIL3-203ENST00000560349 SUMO2P61956 95 aaKnown RBP10.34□□□□□ -0.75
CARMIL3-203ENST00000560349 MRAP2Q96G30 205 aa10.34□□□□□ -0.75
CARMIL3-203ENST00000560349 SMIM2Q9BVW6 85 aa10.34□□□□□ -0.75
CARMIL3-203ENST00000560349 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
CARMIL3-203ENST00000560349 MED14OSP0DP75 135 aa10.34□□□□□ -0.75
CARMIL3-203ENST00000560349 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
CARMIL3-203ENST00000560349 SUMO4Q6EEV6 95 aa10.34□□□□□ -0.75
CARMIL3-203ENST00000560349 C9orf85Q96MD7 179 aa10.33□□□□□ -0.76
CARMIL3-203ENST00000560349 C16orf95Q9H693 158 aa10.33□□□□□ -0.76
CARMIL3-203ENST00000560349 ADARB2-AS1A8MUL3 147 aa10.33□□□□□ -0.76
CARMIL3-203ENST00000560349 NXPH4O95158 308 aa10.33□□□□□ -0.76
CARMIL3-203ENST00000560349 IGKCP01834 107 aa10.33□□□□□ -0.76
CARMIL3-203ENST00000560349 PROK1P58294 105 aa10.33□□□□□ -0.76
CARMIL3-203ENST00000560349 LAGE3Q14657 143 aa10.33□□□□□ -0.76
CARMIL3-203ENST00000560349 ZNF56Q15929 161 aa10.33□□□□□ -0.76
CARMIL3-203ENST00000560349 GTSCR1Q86UQ5 136 aa10.33□□□□□ -0.76
CARMIL3-203ENST00000560349 K7EP34 96 aa10.32□□□□□ -0.76
CARMIL3-203ENST00000560349 GTF2H5Q6ZYL4 71 aa10.32□□□□□ -0.76
CARMIL3-203ENST00000560349 SPAG8Q99932 426 aaPredicted RBP10.32□□□□□ -0.76
CARMIL3-203ENST00000560349 NACAE9PAV3 2078 aa10.32□□□□□ -0.76
CARMIL3-203ENST00000560349 FXYD2P54710 66 aa10.31□□□□□ -0.76
CARMIL3-203ENST00000560349 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
CARMIL3-203ENST00000560349 LINC01587Q99440 93 aa10.31□□□□□ -0.76
CARMIL3-203ENST00000560349 A0A1W2PPM0 123 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 GCSHP23434 173 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 GEMIN7Q9H840 131 aaKnown RBP10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 TMEM160Q9NX00 188 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 MRPL35Q9NZE8 188 aaKnown RBP10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 ATP5LO75964 103 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 DPM2O94777 84 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 STHQ8IWL8 128 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 SPATA3Q8NHX4 192 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 HIGD1BQ9P298 99 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 SS18L2Q9UHA2 77 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 TRBV25-1A0A075B6N4 114 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 CRYGDP07320 174 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 P0DMU3 169 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 FAM231AP0DMU4 169 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 FAM231CP0DMU5 169 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 HERV-K104P63124 156 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 CHAC1Q9BUX1 264 aa10.3□□□□□ -0.76
CARMIL3-203ENST00000560349 OR11H12B2RN74 326 aa10.29□□□□□ -0.76
CARMIL3-203ENST00000560349 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
CARMIL3-203ENST00000560349 SMIM13P0DJ93 91 aa10.29□□□□□ -0.76
CARMIL3-203ENST00000560349 MAPKAPK5-AS1Q8N8E1 139 aa10.29□□□□□ -0.76
CARMIL3-203ENST00000560349 Q9UF83 564 aa10.29□□□□□ -0.76
CARMIL3-203ENST00000560349 TSPAN13O95857 204 aa10.28□□□□□ -0.76
CARMIL3-203ENST00000560349 SYT8Q8NBV8 401 aa10.28□□□□□ -0.76
CARMIL3-203ENST00000560349 SPCS1Q9Y6A9 102 aa10.28□□□□□ -0.76
CARMIL3-203ENST00000560349 TRGV11A0A075B6L2 103 aa10.28□□□□□ -0.76
CARMIL3-203ENST00000560349 GAGE12HA6NDE8 117 aa10.28□□□□□ -0.76
CARMIL3-203ENST00000560349 K7EMI3 77 aa10.28□□□□□ -0.76
CARMIL3-203ENST00000560349 K7ERJ3 54 aa10.28□□□□□ -0.76
CARMIL3-203ENST00000560349 MORN3Q6PF18 240 aaPredicted RBP10.28□□□□□ -0.76
CARMIL3-203ENST00000560349 MRPL16Q9NX20 251 aaKnown RBP10.28□□□□□ -0.76
CARMIL3-203ENST00000560349 TRAV2A0A0B4J234 112 aa10.27□□□□□ -0.77
CARMIL3-203ENST00000560349 RPL35AP18077 110 aaKnown RBP10.27□□□□□ -0.77
CARMIL3-203ENST00000560349 RPL24P83731 157 aaKnown RBP10.27□□□□□ -0.77
CARMIL3-203ENST00000560349 SDHAF1A6NFY7 115 aa10.27□□□□□ -0.77
CARMIL3-203ENST00000560349 RPL39P62891 51 aaKnown RBP10.27□□□□□ -0.77
CARMIL3-203ENST00000560349 SAMD5Q5TGI4 173 aa10.27□□□□□ -0.77
CARMIL3-203ENST00000560349 A0A087WX48 190 aa10.26□□□□□ -0.77
CARMIL3-203ENST00000560349 A8MTW9 85 aa10.26□□□□□ -0.77
CARMIL3-203ENST00000560349 PHLDA1Q8WV24 401 aaPredicted RBP10.26□□□□□ -0.77
CARMIL3-203ENST00000560349 C20orf78Q9BR46 151 aa10.26□□□□□ -0.77
CARMIL3-203ENST00000560349 INSP01308 110 aa10.26□□□□□ -0.77
CARMIL3-203ENST00000560349 C2orf66Q6UXQ4 117 aa10.26□□□□□ -0.77
CARMIL3-203ENST00000560349 M0QY20 66 aa10.25□□□□□ -0.77
CARMIL3-203ENST00000560349 NDUFA7O95182 113 aa10.25□□□□□ -0.77
CARMIL3-203ENST00000560349 FABP2P12104 132 aa10.25□□□□□ -0.77
CARMIL3-203ENST00000560349 PF4P02776 101 aa10.25□□□□□ -0.77
CARMIL3-203ENST00000560349 CEND1Q8N111 149 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms