RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 RPP21Q9H633 154 aaKnown RBP8.82□□□□□ -1
SMAD3-213ENST00000560175 EREGO14944 169 aa8.81□□□□□ -1
SMAD3-213ENST00000560175 SRP19P09132 144 aaKnown RBP8.81□□□□□ -1
SMAD3-213ENST00000560175 SMIM17P0DL12 118 aa8.81□□□□□ -1
SMAD3-213ENST00000560175 SSTP61278 116 aa8.81□□□□□ -1
SMAD3-213ENST00000560175 TOR2AQ5JU69 321 aa8.81□□□□□ -1
SMAD3-213ENST00000560175 TEX261Q6UWH6 196 aa8.81□□□□□ -1
SMAD3-213ENST00000560175 DAZ4Q86SG3 579 aaKnown RBP8.81□□□□□ -1
SMAD3-213ENST00000560175 GTSF1Q8WW33 167 aa8.81□□□□□ -1
SMAD3-213ENST00000560175 DNAJC30Q96LL9 226 aa8.81□□□□□ -1
SMAD3-213ENST00000560175 DAZ3Q9NR90 486 aaKnown RBP8.81□□□□□ -1
SMAD3-213ENST00000560175 TRAV8-3A0A0A6YYJ7 113 aa8.8□□□□□ -1
SMAD3-213ENST00000560175 F5H697 171 aa8.8□□□□□ -1
SMAD3-213ENST00000560175 TRGC1P0CF51 173 aa8.8□□□□□ -1
SMAD3-213ENST00000560175 CT83Q5H943 113 aa8.8□□□□□ -1
SMAD3-213ENST00000560175 NTM-AS1Q6ZSK4 140 aa8.8□□□□□ -1
SMAD3-213ENST00000560175 TPPP3Q9BW30 176 aa8.8□□□□□ -1
SMAD3-213ENST00000560175 KRTAP17-1Q9BYP8 105 aa8.8□□□□□ -1
SMAD3-213ENST00000560175 EIF5A2Q9GZV4 153 aaKnown RBP8.8□□□□□ -1
SMAD3-213ENST00000560175 TMEM97Q5BJF2 176 aa8.79□□□□□ -1
SMAD3-213ENST00000560175 SUMO4Q6EEV6 95 aa8.79□□□□□ -1
SMAD3-213ENST00000560175 ATRAIDQ6UW56 229 aa8.79□□□□□ -1
SMAD3-213ENST00000560175 LINC01551Q86U37 167 aa8.79□□□□□ -1
SMAD3-213ENST00000560175 TM2D2Q9BX73 214 aa8.79□□□□□ -1
SMAD3-213ENST00000560175 DPH3P1Q9H4G8 78 aa8.79□□□□□ -1
SMAD3-213ENST00000560175 A8MWL6 223 aa8.78□□□□□ -1
SMAD3-213ENST00000560175 H7C1H1 209 aa8.78□□□□□ -1
SMAD3-213ENST00000560175 FRZBQ92765 325 aa8.78□□□□□ -1
SMAD3-213ENST00000560175 SMIM7Q9BQ49 75 aa8.78□□□□□ -1
SMAD3-213ENST00000560175 SMDT1Q9H4I9 107 aa8.78□□□□□ -1
SMAD3-213ENST00000560175 FAM231BA6NCW3 169 aa8.77□□□□□ -1.01
SMAD3-213ENST00000560175 ZNF727A8MUV8 499 aa8.77□□□□□ -1.01
SMAD3-213ENST00000560175 GATCO43716 136 aaKnown RBP8.77□□□□□ -1.01
SMAD3-213ENST00000560175 RASL11AQ6T310 242 aa8.77□□□□□ -1.01
SMAD3-213ENST00000560175 MAPKAPK5-AS1Q8N8E1 139 aa8.77□□□□□ -1.01
SMAD3-213ENST00000560175 Q9HAA7 133 aa8.77□□□□□ -1.01
SMAD3-213ENST00000560175 NIT2Q9NQR4 276 aa8.77□□□□□ -1.01
SMAD3-213ENST00000560175 OSTCQ9NRP0 149 aa8.77□□□□□ -1.01
SMAD3-213ENST00000560175 DNAH8Q96JB1 4490 aa8.77□□□□□ -1.01
SMAD3-213ENST00000560175 C9JQL5 133 aa8.76□□□□□ -1.01
SMAD3-213ENST00000560175 PSCAO43653 123 aa8.76□□□□□ -1.01
SMAD3-213ENST00000560175 ELOBQ15370 118 aa8.76□□□□□ -1.01
SMAD3-213ENST00000560175 TWIST1Q15672 202 aa8.76□□□□□ -1.01
SMAD3-213ENST00000560175 IQCJQ1A5X6 159 aa8.76□□□□□ -1.01
SMAD3-213ENST00000560175 FAM74A3Q4VXF1 159 aa8.76□□□□□ -1.01
SMAD3-213ENST00000560175 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.76□□□□□ -1.01
SMAD3-213ENST00000560175 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
SMAD3-213ENST00000560175 GFRA4Q9GZZ7 299 aa8.76□□□□□ -1.01
SMAD3-213ENST00000560175 KLK12Q9UKR0 248 aa8.76□□□□□ -1.01
SMAD3-213ENST00000560175 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
SMAD3-213ENST00000560175 URGCP-MRPS24S4R325 110 aa8.76□□□□□ -1.01
SMAD3-213ENST00000560175 A0A087WX48 190 aa8.75□□□□□ -1.01
SMAD3-213ENST00000560175 MGPP08493 103 aa8.75□□□□□ -1.01
SMAD3-213ENST00000560175 PKIAP61925 76 aa8.75□□□□□ -1.01
SMAD3-213ENST00000560175 Q8N814 137 aa8.75□□□□□ -1.01
SMAD3-213ENST00000560175 PGLYRP4Q96LB8 373 aa8.75□□□□□ -1.01
SMAD3-213ENST00000560175 FUSP35637 526 aaKnown RBP eCLIP8.74□□□□□ -1.014e-6■■□□□ 13.9
SMAD3-213ENST00000560175 CEBPGP53567 150 aa8.74□□□□□ -1.01
SMAD3-213ENST00000560175 Q0VG73 95 aa8.74□□□□□ -1.01
SMAD3-213ENST00000560175 MPV17L2Q567V2 206 aa8.74□□□□□ -1.01
SMAD3-213ENST00000560175 ENHOQ6UWT2 76 aa8.74□□□□□ -1.01
SMAD3-213ENST00000560175 GATD1Q8NB37 220 aa8.74□□□□□ -1.01
SMAD3-213ENST00000560175 TSKUQ8WUA8 353 aa8.74□□□□□ -1.01
SMAD3-213ENST00000560175 TRBV25-1A0A075B6N4 114 aa8.73□□□□□ -1.01
SMAD3-213ENST00000560175 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
SMAD3-213ENST00000560175 SRSF3P84103 164 aaKnown RBP8.73□□□□□ -1.01
SMAD3-213ENST00000560175 WFDC2Q14508 124 aa8.73□□□□□ -1.01
SMAD3-213ENST00000560175 TMEM241Q24JQ0 296 aa8.73□□□□□ -1.01
SMAD3-213ENST00000560175 ISOC2Q96AB3 205 aa8.73□□□□□ -1.01
SMAD3-213ENST00000560175 RMI2Q96E14 147 aa8.73□□□□□ -1.01
SMAD3-213ENST00000560175 KRTAP4-5Q9BYR2 181 aa8.73□□□□□ -1.01
SMAD3-213ENST00000560175 PRR34Q9NV39 138 aa8.73□□□□□ -1.01
SMAD3-213ENST00000560175 V9GYV3 84 aa8.73□□□□□ -1.01
SMAD3-213ENST00000560175 A0A1B0GUV1 79 aa8.72□□□□□ -1.01
SMAD3-213ENST00000560175 TMEM262E9PQX1 116 aa8.72□□□□□ -1.01
SMAD3-213ENST00000560175 XGP55808 180 aa8.72□□□□□ -1.01
SMAD3-213ENST00000560175 RPL23P62829 140 aaKnown RBP8.72□□□□□ -1.01
SMAD3-213ENST00000560175 PEA15Q15121 130 aa8.72□□□□□ -1.01
SMAD3-213ENST00000560175 UBE2WQ96B02 151 aa8.72□□□□□ -1.01
SMAD3-213ENST00000560175 CHCHD5Q9BSY4 110 aa8.72□□□□□ -1.01
SMAD3-213ENST00000560175 IGHV1-24A0A0C4DH33 117 aa8.71□□□□□ -1.02
SMAD3-213ENST00000560175 HIGD1CA8MV81 97 aa8.71□□□□□ -1.02
SMAD3-213ENST00000560175 GCSHP23434 173 aa8.71□□□□□ -1.02
SMAD3-213ENST00000560175 KCNIP4Q6PIL6 250 aa8.71□□□□□ -1.02
SMAD3-213ENST00000560175 Q8N1X5 172 aa8.71□□□□□ -1.02
SMAD3-213ENST00000560175 NAT8Q9UHE5 227 aa8.71□□□□□ -1.02
SMAD3-213ENST00000560175 PCLOQ9Y6V0 5065 aa8.71□□□□□ -1.02
SMAD3-213ENST00000560175 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
SMAD3-213ENST00000560175 A0A1B0GUT8 65 aa8.7□□□□□ -1.02
SMAD3-213ENST00000560175 RBX1P62877 108 aa8.7□□□□□ -1.02
SMAD3-213ENST00000560175 KRTAP26-1Q6PEX3 210 aa8.7□□□□□ -1.02
SMAD3-213ENST00000560175 SMIM15Q7Z3B0 74 aa8.7□□□□□ -1.02
SMAD3-213ENST00000560175 Q8N976 141 aa8.7□□□□□ -1.02
SMAD3-213ENST00000560175 TMEM191AQ9H0A3 160 aa8.7□□□□□ -1.02
SMAD3-213ENST00000560175 IGKV2D-24A0A075B6R9 120 aa8.69□□□□□ -1.02
SMAD3-213ENST00000560175 TRAV26-2A0A0B4J265 109 aa8.69□□□□□ -1.02
SMAD3-213ENST00000560175 MIAQ16674 131 aa8.69□□□□□ -1.02
SMAD3-213ENST00000560175 C15orf54Q8N8G6 183 aa8.69□□□□□ -1.02
SMAD3-213ENST00000560175 NUP35Q8NFH5 326 aa8.69□□□□□ -1.02
SMAD3-213ENST00000560175 BAALCQ8WXS3 180 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms