RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 SPANXB1Q9NS25 103 aaPredicted RBP11.98□□□□□ -0.49
APH1B-207ENST00000559971 CSPG4Q6UVK1 2322 aa11.98□□□□□ -0.49
APH1B-207ENST00000559971 TENM4Q6N022 2769 aa11.98□□□□□ -0.49
APH1B-207ENST00000559971 RBX1P62877 108 aa11.97□□□□□ -0.49
APH1B-207ENST00000559971 MORN3Q6PF18 240 aaPredicted RBP11.97□□□□□ -0.49
APH1B-207ENST00000559971 TMEM61Q8N0U2 210 aa11.97□□□□□ -0.49
APH1B-207ENST00000559971 KLHL30-AS1Q8NEE0 82 aa11.97□□□□□ -0.49
APH1B-207ENST00000559971 IGLL5B9A064 214 aa11.96□□□□□ -0.49
APH1B-207ENST00000559971 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.49
APH1B-207ENST00000559971 LYRM7Q5U5X0 104 aa11.96□□□□□ -0.49
APH1B-207ENST00000559971 MAP6D1Q9H9H5 199 aa11.96□□□□□ -0.49
APH1B-207ENST00000559971 TNFRSF18Q9Y5U5 241 aa11.96□□□□□ -0.49
APH1B-207ENST00000559971 DOPEY2Q9Y3R5 2298 aa11.96□□□□□ -0.49
APH1B-207ENST00000559971 GCN1Q92616 2671 aaKnown RBP11.96□□□□□ -0.49
APH1B-207ENST00000559971 RPL39P62891 51 aaKnown RBP11.95□□□□□ -0.5
APH1B-207ENST00000559971 KRTAP1-3Q8IUG1 177 aa11.95□□□□□ -0.5
APH1B-207ENST00000559971 DLX4Q92988 240 aaPredicted RBP11.95□□□□□ -0.5
APH1B-207ENST00000559971 PLEKHB2Q96CS7 222 aa11.95□□□□□ -0.5
APH1B-207ENST00000559971 ZNF479Q96JC4 524 aa11.95□□□□□ -0.5
APH1B-207ENST00000559971 VCX2Q9H322 139 aa11.95□□□□□ -0.5
APH1B-207ENST00000559971 LEPROTO15243 131 aa11.95□□□□□ -0.5
APH1B-207ENST00000559971 SRSF9Q13242 221 aaKnown RBP eCLIP11.95□□□□□ -0.5
APH1B-207ENST00000559971 BEAN1Q3B7T3 259 aa11.95□□□□□ -0.5
APH1B-207ENST00000559971 CD300EQ496F6 205 aaPredicted RBP11.95□□□□□ -0.5
APH1B-207ENST00000559971 TMEM170BQ5T4T1 132 aa11.95□□□□□ -0.5
APH1B-207ENST00000559971 Q6ZSV7 163 aa11.95□□□□□ -0.5
APH1B-207ENST00000559971 CR1P17927 2039 aa11.94□□□□□ -0.5
APH1B-207ENST00000559971 PTPN13Q12923 2485 aa11.94□□□□□ -0.5
APH1B-207ENST00000559971 LGALS3P17931 250 aaKnown RBP11.94□□□□□ -0.5
APH1B-207ENST00000559971 RRN3P1Q2M238 152 aa11.94□□□□□ -0.5
APH1B-207ENST00000559971 DEFB136Q30KP8 78 aa11.94□□□□□ -0.5
APH1B-207ENST00000559971 LINC01587Q99440 93 aa11.94□□□□□ -0.5
APH1B-207ENST00000559971 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
APH1B-207ENST00000559971 F8W1H4 67 aa11.93□□□□□ -0.5
APH1B-207ENST00000559971 P0DMU3 169 aa11.92□□□□□ -0.5
APH1B-207ENST00000559971 FAM231AP0DMU4 169 aa11.92□□□□□ -0.5
APH1B-207ENST00000559971 FAM231CP0DMU5 169 aa11.92□□□□□ -0.5
APH1B-207ENST00000559971 FHL3Q13643 280 aa11.92□□□□□ -0.5
APH1B-207ENST00000559971 C18orf65Q6ZTR6 163 aa11.92□□□□□ -0.5
APH1B-207ENST00000559971 DNAJC9-AS1A6NH13 148 aa11.91□□□□□ -0.5
APH1B-207ENST00000559971 J3QQQ9 107 aa11.91□□□□□ -0.5
APH1B-207ENST00000559971 RBMY1A1P0DJD3 496 aaKnown RBP11.91□□□□□ -0.5
APH1B-207ENST00000559971 RBMY1CP0DJD4 496 aa11.91□□□□□ -0.5
APH1B-207ENST00000559971 RBMY1FQ15415 496 aaKnown RBP11.91□□□□□ -0.5
APH1B-207ENST00000559971 SLC25A29Q8N8R3 303 aa11.91□□□□□ -0.5
APH1B-207ENST00000559971 C16orf95Q9H693 158 aa11.91□□□□□ -0.5
APH1B-207ENST00000559971 CENPEQ02224 2701 aa11.91□□□□□ -0.5
APH1B-207ENST00000559971 IGLV4-3A0A075B6K6 122 aa11.9□□□□□ -0.5
APH1B-207ENST00000559971 A0A0J9YY99 117 aa11.9□□□□□ -0.5
APH1B-207ENST00000559971 TMEM223A0PJW6 202 aa11.9□□□□□ -0.5
APH1B-207ENST00000559971 RBMY1BA6NDE4 496 aaKnown RBP11.9□□□□□ -0.5
APH1B-207ENST00000559971 RBMY1EA6NEQ0 496 aaKnown RBP11.9□□□□□ -0.5
APH1B-207ENST00000559971 RS1O15537 224 aa11.9□□□□□ -0.5
APH1B-207ENST00000559971 IGHV3-53P01767 116 aa11.9□□□□□ -0.5
APH1B-207ENST00000559971 RBMY1DP0C7P1 496 aaKnown RBP11.9□□□□□ -0.5
APH1B-207ENST00000559971 SMAGPQ0VAQ4 97 aa11.9□□□□□ -0.5
APH1B-207ENST00000559971 STHQ8IWL8 128 aa11.9□□□□□ -0.5
APH1B-207ENST00000559971 TSSC4Q9Y5U2 329 aaPredicted RBP11.9□□□□□ -0.5
APH1B-207ENST00000559971 K7ERJ3 54 aa11.89□□□□□ -0.51
APH1B-207ENST00000559971 UBE2D1P51668 147 aa11.89□□□□□ -0.51
APH1B-207ENST00000559971 CFAP126Q5VTH2 177 aa11.89□□□□□ -0.51
APH1B-207ENST00000559971 ZNRF2Q8NHG8 242 aa11.89□□□□□ -0.51
APH1B-207ENST00000559971 AMELXQ99217 191 aa11.89□□□□□ -0.51
APH1B-207ENST00000559971 FAM110AQ9BQ89 295 aa11.89□□□□□ -0.51
APH1B-207ENST00000559971 VPS25Q9BRG1 176 aa11.89□□□□□ -0.51
APH1B-207ENST00000559971 ANKRD17O75179 2603 aaKnown RBP11.89□□□□□ -0.51
APH1B-207ENST00000559971 CCL24O00175 119 aa11.89□□□□□ -0.51
APH1B-207ENST00000559971 C11orf72Q8NBR9 251 aa11.89□□□□□ -0.51
APH1B-207ENST00000559971 NAA38Q9BRA0 125 aaKnown RBP11.89□□□□□ -0.51
APH1B-207ENST00000559971 J3QR89 54 aa11.88□□□□□ -0.51
APH1B-207ENST00000559971 CIDEAO60543 219 aa11.88□□□□□ -0.51
APH1B-207ENST00000559971 CD28P10747 220 aa11.88□□□□□ -0.51
APH1B-207ENST00000559971 HTN1P15515 57 aa11.88□□□□□ -0.51
APH1B-207ENST00000559971 TIMM21Q9BVV7 248 aa11.88□□□□□ -0.51
APH1B-207ENST00000559971 ZNF22P17026 224 aaPredicted RBP11.87□□□□□ -0.51
APH1B-207ENST00000559971 MRPS36P82909 103 aaKnown RBP11.87□□□□□ -0.51
APH1B-207ENST00000559971 COTL1Q14019 142 aa11.87□□□□□ -0.51
APH1B-207ENST00000559971 RNF151Q2KHN1 245 aa11.87□□□□□ -0.51
APH1B-207ENST00000559971 UTP20O75691 2785 aaKnown RBP11.86□□□□□ -0.51
APH1B-207ENST00000559971 TMEM238C9JI98 176 aa11.86□□□□□ -0.51
APH1B-207ENST00000559971 G3V4G9 280 aa11.86□□□□□ -0.51
APH1B-207ENST00000559971 RNASE1P07998 156 aaKnown RBP11.86□□□□□ -0.51
APH1B-207ENST00000559971 TRBV10-1A0A0K0K1A3 114 aa11.85□□□□□ -0.51
APH1B-207ENST00000559971 TINCRA0A1B0GVN0 87 aa11.85□□□□□ -0.51
APH1B-207ENST00000559971 MRPL16Q9NX20 251 aaKnown RBP11.85□□□□□ -0.51
APH1B-207ENST00000559971 CRYBG3Q68DQ2 2970 aa11.85□□□□□ -0.51
APH1B-207ENST00000559971 EMP1P54849 157 aa11.84□□□□□ -0.51
APH1B-207ENST00000559971 RPL24P83731 157 aaKnown RBP11.84□□□□□ -0.51
APH1B-207ENST00000559971 TRBV20-1A0A075B6N2 111 aa11.83□□□□□ -0.52
APH1B-207ENST00000559971 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.83□□□□□ -0.52
APH1B-207ENST00000559971 IGHV3-30P01768 117 aa11.83□□□□□ -0.52
APH1B-207ENST00000559971 IGHV3-30-5P0DP03 117 aa11.83□□□□□ -0.52
APH1B-207ENST00000559971 ODF3L2Q3SX64 289 aa11.83□□□□□ -0.52
APH1B-207ENST00000559971 GAGE13Q4V321 117 aa11.83□□□□□ -0.52
APH1B-207ENST00000559971 WFDC11Q8NEX6 87 aa11.83□□□□□ -0.52
APH1B-207ENST00000559971 PGPEP1Q9NXJ5 209 aa11.83□□□□□ -0.52
APH1B-207ENST00000559971 ASH1LQ9NR48 2969 aaKnown RBP11.83□□□□□ -0.52
APH1B-207ENST00000559971 IL17DQ8TAD2 202 aa11.83□□□□□ -0.52
APH1B-207ENST00000559971 CELSR2Q9HCU4 2923 aa11.82□□□□□ -0.52
APH1B-207ENST00000559971 CREBBPQ92793 2442 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms