RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 RPL19P84098 196 aaKnown RBP8.31□□□□□ -1.08
SNX1-209ENST00000559961 C15orf54Q8N8G6 183 aa8.31□□□□□ -1.08
SNX1-209ENST00000559961 OR10AG1Q8NH19 301 aa8.31□□□□□ -1.08
SNX1-209ENST00000559961 GNG13Q9P2W3 67 aa8.31□□□□□ -1.08
SNX1-209ENST00000559961 TRBV25-1A0A075B6N4 114 aa8.3□□□□□ -1.08
SNX1-209ENST00000559961 MUC21A0A0G2JKD1 596 aa8.3□□□□□ -1.08
SNX1-209ENST00000559961 MUC21A0A140T8X8 626 aa8.3□□□□□ -1.08
SNX1-209ENST00000559961 WFDC2Q14508 124 aa8.3□□□□□ -1.08
SNX1-209ENST00000559961 NEXN-AS1Q8NBZ9 246 aa8.3□□□□□ -1.08
SNX1-209ENST00000559961 MLST8Q9BVC4 326 aa8.3□□□□□ -1.08
SNX1-209ENST00000559961 FAM30AQ9NZY2 134 aa8.3□□□□□ -1.08
SNX1-209ENST00000559961 SNAI2O43623 268 aa8.29□□□□□ -1.08
SNX1-209ENST00000559961 MGPP08493 103 aa8.29□□□□□ -1.08
SNX1-209ENST00000559961 GNG4P50150 75 aa8.29□□□□□ -1.08
SNX1-209ENST00000559961 CACNG7P62955 275 aa8.29□□□□□ -1.08
SNX1-209ENST00000559961 MIAQ16674 131 aa8.29□□□□□ -1.08
SNX1-209ENST00000559961 LINC00528Q8N1L1 170 aa8.29□□□□□ -1.08
SNX1-209ENST00000559961 DERL1Q9BUN8 251 aa8.29□□□□□ -1.08
SNX1-209ENST00000559961 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
SNX1-209ENST00000559961 PDE6DO43924 150 aa8.28□□□□□ -1.08
SNX1-209ENST00000559961 P01737 135 aa8.28□□□□□ -1.08
SNX1-209ENST00000559961 FER1L6-AS1Q8NA97 138 aa8.28□□□□□ -1.08
SNX1-209ENST00000559961 OR2D3Q8NGH3 330 aa8.28□□□□□ -1.08
SNX1-209ENST00000559961 DEFB104AQ8WTQ1 72 aa8.28□□□□□ -1.08
SNX1-209ENST00000559961 DNAJC30Q96LL9 226 aa8.28□□□□□ -1.08
SNX1-209ENST00000559961 F2Z2F3 143 aa8.27□□□□□ -1.09
SNX1-209ENST00000559961 HLA-DQA1P01909 254 aa8.27□□□□□ -1.09
SNX1-209ENST00000559961 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
SNX1-209ENST00000559961 CENPWQ5EE01 88 aa8.27□□□□□ -1.09
SNX1-209ENST00000559961 ATRAIDQ6UW56 229 aa8.27□□□□□ -1.09
SNX1-209ENST00000559961 SMIM12Q96EX1 92 aa8.27□□□□□ -1.09
SNX1-209ENST00000559961 MED9Q9NWA0 146 aa8.27□□□□□ -1.09
SNX1-209ENST00000559961 TRAV1-1A0A0B4J248 108 aa8.26□□□□□ -1.09
SNX1-209ENST00000559961 IGHV1-24A0A0C4DH33 117 aa8.26□□□□□ -1.09
SNX1-209ENST00000559961 MPV17L2Q567V2 206 aa8.26□□□□□ -1.09
SNX1-209ENST00000559961 Q6ZSA8 131 aa8.26□□□□□ -1.09
SNX1-209ENST00000559961 CHAC1Q9BUX1 264 aa8.26□□□□□ -1.09
SNX1-209ENST00000559961 UBE2L6O14933 153 aa8.25□□□□□ -1.09
SNX1-209ENST00000559961 TAGLN2P37802 199 aaKnown RBP8.25□□□□□ -1.09
SNX1-209ENST00000559961 CCL20P78556 96 aa8.25□□□□□ -1.09
SNX1-209ENST00000559961 MEF2BQ02080 365 aaPredicted RBP8.25□□□□□ -1.09
SNX1-209ENST00000559961 GAGE6Q13070 117 aa8.25□□□□□ -1.09
SNX1-209ENST00000559961 LINC01620Q4KN68 170 aa8.25□□□□□ -1.09
SNX1-209ENST00000559961 ENHOQ6UWT2 76 aa8.25□□□□□ -1.09
SNX1-209ENST00000559961 SMIM15Q7Z3B0 74 aa8.25□□□□□ -1.09
SNX1-209ENST00000559961 C11orf52Q96A22 123 aa8.25□□□□□ -1.09
SNX1-209ENST00000559961 VAX2Q9UIW0 290 aa8.25□□□□□ -1.09
SNX1-209ENST00000559961 RBX1P62877 108 aa8.24□□□□□ -1.09
SNX1-209ENST00000559961 DGAT2L7PQ6IED9 249 aa8.24□□□□□ -1.09
SNX1-209ENST00000559961 SCXQ7RTU7 201 aa8.24□□□□□ -1.09
SNX1-209ENST00000559961 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
SNX1-209ENST00000559961 USP17L23D6RBM5 183 aa8.23□□□□□ -1.09
SNX1-209ENST00000559961 GZMBP10144 247 aa8.23□□□□□ -1.09
SNX1-209ENST00000559961 RASL11AQ6T310 242 aa8.23□□□□□ -1.09
SNX1-209ENST00000559961 CLRN3Q8NCR9 226 aa8.23□□□□□ -1.09
SNX1-209ENST00000559961 DPH3Q96FX2 82 aa8.23□□□□□ -1.09
SNX1-209ENST00000559961 TMEM243Q9BU79 118 aa8.23□□□□□ -1.09
SNX1-209ENST00000559961 AP5S1Q9NUS5 200 aa8.23□□□□□ -1.09
SNX1-209ENST00000559961 TRAV8-4A0A0B4J246 113 aa8.22□□□□□ -1.09
SNX1-209ENST00000559961 RAB19A4D1S5 217 aa8.22□□□□□ -1.09
SNX1-209ENST00000559961 SULT1A2P50226 295 aa8.22□□□□□ -1.09
SNX1-209ENST00000559961 NKX2-5P52952 324 aaPredicted RBP8.22□□□□□ -1.09
SNX1-209ENST00000559961 TWIST1Q15672 202 aa8.22□□□□□ -1.09
SNX1-209ENST00000559961 IQCJQ1A5X6 159 aa8.22□□□□□ -1.09
SNX1-209ENST00000559961 WDR73Q6P4I2 378 aa8.22□□□□□ -1.09
SNX1-209ENST00000559961 CLPSL2Q6UWE3 100 aa8.22□□□□□ -1.09
SNX1-209ENST00000559961 SLC51BQ86UW2 128 aa8.22□□□□□ -1.09
SNX1-209ENST00000559961 DPH3P1Q9H4G8 78 aa8.22□□□□□ -1.09
SNX1-209ENST00000559961 FAT1Q14517 4588 aa8.21□□□□□ -1.1
SNX1-209ENST00000559961 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.21□□□□□ -1.1
SNX1-209ENST00000559961 M0QY20 66 aa8.21□□□□□ -1.1
SNX1-209ENST00000559961 IGLC6P0CF74 106 aa8.21□□□□□ -1.1
SNX1-209ENST00000559961 REG3AQ06141 175 aa8.21□□□□□ -1.1
SNX1-209ENST00000559961 COTL1Q14019 142 aa8.21□□□□□ -1.1
SNX1-209ENST00000559961 SUMO4Q6EEV6 95 aa8.21□□□□□ -1.1
SNX1-209ENST00000559961 LYZL1Q6UWQ5 148 aa8.21□□□□□ -1.1
SNX1-209ENST00000559961 CIRBP-AS1Q8TBR5 109 aa8.21□□□□□ -1.1
SNX1-209ENST00000559961 NIT2Q9NQR4 276 aa8.21□□□□□ -1.1
SNX1-209ENST00000559961 KIF25-AS1Q9Y6Z4 181 aa8.21□□□□□ -1.1
SNX1-209ENST00000559961 IGLV2-8P01709 118 aa8.2□□□□□ -1.1
SNX1-209ENST00000559961 BCL2P10415 239 aa8.2□□□□□ -1.1
SNX1-209ENST00000559961 NTF3P20783 257 aa8.2□□□□□ -1.1
SNX1-209ENST00000559961 NTM-AS1Q6ZSK4 140 aa8.2□□□□□ -1.1
SNX1-209ENST00000559961 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
SNX1-209ENST00000559961 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
SNX1-209ENST00000559961 AMTP48728 403 aa8.19□□□□□ -1.1
SNX1-209ENST00000559961 CFAP161Q6P656 301 aa8.19□□□□□ -1.1
SNX1-209ENST00000559961 C9orf62Q8N4C0 152 aa8.19□□□□□ -1.1
SNX1-209ENST00000559961 DMBT1Q9UGM3 2413 aaPredicted RBP8.19□□□□□ -1.1
SNX1-209ENST00000559961 IGLV10-54A0A075B6I4 117 aa8.18□□□□□ -1.1
SNX1-209ENST00000559961 A0A1B0GUV1 79 aa8.18□□□□□ -1.1
SNX1-209ENST00000559961 hDV102S1A0JD36 115 aa8.18□□□□□ -1.1
SNX1-209ENST00000559961 PRSS1P07477 247 aa8.18□□□□□ -1.1
SNX1-209ENST00000559961 AMMECR1LQ6DCA0 310 aa8.18□□□□□ -1.1
SNX1-209ENST00000559961 TEX261Q6UWH6 196 aa8.18□□□□□ -1.1
SNX1-209ENST00000559961 TCTE3Q8IZS6 198 aa8.18□□□□□ -1.1
SNX1-209ENST00000559961 NUDT10Q8NFP7 164 aa8.18□□□□□ -1.1
SNX1-209ENST00000559961 BORCS7Q96B45 105 aa8.18□□□□□ -1.1
SNX1-209ENST00000559961 NUDT11Q96G61 164 aa8.18□□□□□ -1.1
SNX1-209ENST00000559961 PGLYRP4Q96LB8 373 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms