RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 DEFB104AQ8WTQ1 72 aa7.58□□□□□ -1.2
USP3-214ENST00000559718 CHCHD7Q9BUK0 85 aa7.58□□□□□ -1.2
USP3-214ENST00000559718 CHAC1Q9BUX1 264 aa7.58□□□□□ -1.2
USP3-214ENST00000559718 LRP1Q07954 4544 aaKnown RBP7.57□□□□□ -1.2
USP3-214ENST00000559718 TRBV6-8A0A0A6YYG3 113 aa7.57□□□□□ -1.2
USP3-214ENST00000559718 RAB4BP61018 213 aa7.57□□□□□ -1.2
USP3-214ENST00000559718 SSTP61278 116 aa7.57□□□□□ -1.2
USP3-214ENST00000559718 ELOBQ15370 118 aa7.57□□□□□ -1.2
USP3-214ENST00000559718 ZNF56Q15929 161 aa7.57□□□□□ -1.2
USP3-214ENST00000559718 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
USP3-214ENST00000559718 KCNIP4Q6PIL6 250 aa7.57□□□□□ -1.2
USP3-214ENST00000559718 C15orf54Q8N8G6 183 aa7.57□□□□□ -1.2
USP3-214ENST00000559718 TCEAL7Q9BRU2 100 aa7.57□□□□□ -1.2
USP3-214ENST00000559718 Q0VG73 95 aa7.56□□□□□ -1.2
USP3-214ENST00000559718 PRR27Q6MZM9 219 aa7.56□□□□□ -1.2
USP3-214ENST00000559718 SFT2D1Q8WV19 159 aa7.56□□□□□ -1.2
USP3-214ENST00000559718 C1orf43Q9BWL3 253 aa7.56□□□□□ -1.2
USP3-214ENST00000559718 ANGP03950 147 aaKnown RBP7.55□□□□□ -1.2
USP3-214ENST00000559718 NTM-AS1Q6ZSK4 140 aa7.55□□□□□ -1.2
USP3-214ENST00000559718 BAGE2Q86Y30 109 aa7.55□□□□□ -1.2
USP3-214ENST00000559718 FAM213BQ8TBF2 198 aa7.55□□□□□ -1.2
USP3-214ENST00000559718 MBD3L1Q8WWY6 194 aa7.55□□□□□ -1.2
USP3-214ENST00000559718 MLST8Q9BVC4 326 aa7.55□□□□□ -1.2
USP3-214ENST00000559718 ZNF471Q9BX82 626 aaPredicted RBP7.55□□□□□ -1.2
USP3-214ENST00000559718 USP17L23D6RBM5 183 aa7.54□□□□□ -1.2
USP3-214ENST00000559718 SNAI2O43623 268 aa7.54□□□□□ -1.2
USP3-214ENST00000559718 HLA-DQA1P01909 254 aa7.54□□□□□ -1.2
USP3-214ENST00000559718 CRPP02741 224 aa7.54□□□□□ -1.2
USP3-214ENST00000559718 CXCL1P09341 107 aa7.54□□□□□ -1.2
USP3-214ENST00000559718 SPANXN1Q5VSR9 72 aa7.54□□□□□ -1.2
USP3-214ENST00000559718 CLPSL2Q6UWE3 100 aa7.54□□□□□ -1.2
USP3-214ENST00000559718 KCNRGQ8N5I3 272 aa7.54□□□□□ -1.2
USP3-214ENST00000559718 CHCHD5Q9BSY4 110 aa7.54□□□□□ -1.2
USP3-214ENST00000559718 F5H697 171 aa7.53□□□□□ -1.2
USP3-214ENST00000559718 IGLV2-8P01709 118 aa7.53□□□□□ -1.2
USP3-214ENST00000559718 S100A9P06702 114 aaKnown RBP7.53□□□□□ -1.2
USP3-214ENST00000559718 OR5AL1P0C617 328 aa7.53□□□□□ -1.2
USP3-214ENST00000559718 C14orf177Q52M58 125 aa7.53□□□□□ -1.2
USP3-214ENST00000559718 KIF25-AS1Q9Y6Z4 181 aa7.53□□□□□ -1.2
USP3-214ENST00000559718 FAT3Q8TDW7 4589 aa7.52□□□□□ -1.2
USP3-214ENST00000559718 PFDN1O60925 122 aa7.52□□□□□ -1.21
USP3-214ENST00000559718 PRSS1P07477 247 aa7.52□□□□□ -1.21
USP3-214ENST00000559718 GAGE6Q13070 117 aa7.52□□□□□ -1.21
USP3-214ENST00000559718 ZNF345Q14585 488 aa7.52□□□□□ -1.21
USP3-214ENST00000559718 RGS21Q2M5E4 152 aa7.52□□□□□ -1.21
USP3-214ENST00000559718 KRTAP26-1Q6PEX3 210 aa7.52□□□□□ -1.21
USP3-214ENST00000559718 TMUB2Q71RG4 321 aa7.52□□□□□ -1.21
USP3-214ENST00000559718 UMAD1C9J7I0 102 aa7.51□□□□□ -1.21
USP3-214ENST00000559718 GZMBP10144 247 aa7.51□□□□□ -1.21
USP3-214ENST00000559718 RBX1P62877 108 aa7.51□□□□□ -1.21
USP3-214ENST00000559718 CCL20P78556 96 aa7.51□□□□□ -1.21
USP3-214ENST00000559718 LINC00269Q8N2A0 174 aa7.51□□□□□ -1.21
USP3-214ENST00000559718 DERL1Q9BUN8 251 aa7.51□□□□□ -1.21
USP3-214ENST00000559718 PRR34Q9NV39 138 aa7.51□□□□□ -1.21
USP3-214ENST00000559718 VAX2Q9UIW0 290 aa7.51□□□□□ -1.21
USP3-214ENST00000559718 RPL35P42766 123 aaKnown RBP7.5□□□□□ -1.21
USP3-214ENST00000559718 MIAQ16674 131 aa7.5□□□□□ -1.21
USP3-214ENST00000559718 H3BS24 57 aa7.49□□□□□ -1.21
USP3-214ENST00000559718 PANO1I0J062 215 aa7.49□□□□□ -1.21
USP3-214ENST00000559718 BCL2L11O43521 198 aa7.49□□□□□ -1.21
USP3-214ENST00000559718 SMIM17P0DL12 118 aa7.49□□□□□ -1.21
USP3-214ENST00000559718 HNRNPA3P51991 378 aaKnown RBP7.49□□□□□ -1.21
USP3-214ENST00000559718 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.49□□□□□ -1.21
USP3-214ENST00000559718 AP1S3Q96PC3 154 aa7.49□□□□□ -1.21
USP3-214ENST00000559718 TPPP3Q9BW30 176 aa7.49□□□□□ -1.21
USP3-214ENST00000559718 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 IGLV10-54A0A075B6I4 117 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 TRBV25-1A0A075B6N4 114 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 KANTRA0A1W2PQU2 76 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 HMSDA8MTL9 139 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 M0QY20 66 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 MGPP08493 103 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 RPL37AP61513 92 aaKnown RBP7.48□□□□□ -1.21
USP3-214ENST00000559718 PKIAP61925 76 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 TMEM97Q5BJF2 176 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 CENPWQ5EE01 88 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 LCE4AQ5TA78 99 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 C9orf163Q8N9P6 203 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 C11orf52Q96A22 123 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 DAZAP1Q96EP5 407 aaKnown RBP7.48□□□□□ -1.21
USP3-214ENST00000559718 GNG13Q9P2W3 67 aa7.48□□□□□ -1.21
USP3-214ENST00000559718 IGHV1-24A0A0C4DH33 117 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 A0A0D9SG52 128 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 OXTP01178 125 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 IGLC6P0CF74 106 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 IQCJQ1A5X6 159 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 SUMO4Q6EEV6 95 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 DGAT2L7PQ6IED9 249 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 FER1L6-AS1Q8NA97 138 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 C20orf203Q8NBC4 194 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 OR2D3Q8NGH3 330 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 GFRA4Q9GZZ7 299 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 PKHD1L1Q86WI1 4243 aa7.47□□□□□ -1.21
USP3-214ENST00000559718 IGLV4-60A0A075B6I1 120 aa7.46□□□□□ -1.22
USP3-214ENST00000559718 RAB19A4D1S5 217 aa7.46□□□□□ -1.22
USP3-214ENST00000559718 C19orf71A6NCJ1 209 aa7.46□□□□□ -1.22
USP3-214ENST00000559718 NKX2-5P52952 324 aaPredicted RBP7.46□□□□□ -1.22
USP3-214ENST00000559718 REG3AQ06141 175 aa7.46□□□□□ -1.22
USP3-214ENST00000559718 KRTAP19-4Q3LI73 84 aa7.46□□□□□ -1.22
USP3-214ENST00000559718 SERTAD4-AS1Q5TG53 156 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms