RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 P0DMU3 169 aa10.25□□□□□ -0.77
SNRPA1-207ENST00000559309 FAM231AP0DMU4 169 aa10.25□□□□□ -0.77
SNRPA1-207ENST00000559309 FAM231CP0DMU5 169 aa10.25□□□□□ -0.77
SNRPA1-207ENST00000559309 ZNF56Q15929 161 aa10.25□□□□□ -0.77
SNRPA1-207ENST00000559309 PRADC1Q9BSG0 188 aa10.25□□□□□ -0.77
SNRPA1-207ENST00000559309 LCE6AA0A183 80 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 GAS8-AS1O95177 125 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 GYPEP15421 78 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 S100A1P23297 94 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 TIRAPP58753 221 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 UBE2D3P61077 147 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 UBE2D2P62837 147 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 MRPL23Q16540 153 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 MRPL51Q4U2R6 128 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 CBLN2Q8IUK8 224 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 DNAJC30Q96LL9 226 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 GNB1LQ9BYB4 327 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 SMCO4Q9NRQ5 59 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 ICOSQ9Y6W8 199 aa10.24□□□□□ -0.77
SNRPA1-207ENST00000559309 TGIF2-C20orf24A0A0A6YYL0 155 aa10.23□□□□□ -0.77
SNRPA1-207ENST00000559309 H7C1H1 209 aa10.23□□□□□ -0.77
SNRPA1-207ENST00000559309 MGPP08493 103 aa10.23□□□□□ -0.77
SNRPA1-207ENST00000559309 COX19Q49B96 90 aa10.23□□□□□ -0.77
SNRPA1-207ENST00000559309 NRACQ8N912 160 aa10.23□□□□□ -0.77
SNRPA1-207ENST00000559309 NIT2Q9NQR4 276 aa10.23□□□□□ -0.77
SNRPA1-207ENST00000559309 TRBV7-3A0A075B6L6 115 aa10.22□□□□□ -0.77
SNRPA1-207ENST00000559309 TRAV26-2A0A0B4J265 109 aa10.22□□□□□ -0.77
SNRPA1-207ENST00000559309 SH2D6Q7Z4S9 175 aa10.22□□□□□ -0.77
SNRPA1-207ENST00000559309 F5H697 171 aa10.21□□□□□ -0.77
SNRPA1-207ENST00000559309 RPS10P46783 165 aaKnown RBP10.21□□□□□ -0.77
SNRPA1-207ENST00000559309 KMT2AQ03164 3969 aa10.21□□□□□ -0.78
SNRPA1-207ENST00000559309 COLCA2A8K830 154 aa10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 PRSS47A8MTI9 375 aa10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 HLA-DQA1P01909 254 aa10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 PPBPP02775 128 aa10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 MT-ND6P03923 174 aa10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 POLR2KP53803 58 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 RPL36AP83881 106 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 ESRGQ1W209 222 aa10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 NEGR1Q7Z3B1 354 aa10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 RPL36ALQ969Q0 106 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 RPL39LQ96EH5 51 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-207ENST00000559309 GAGE12JA6NER3 117 aa10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 PHOX2AO14813 284 aa10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 NUDT3O95989 172 aa10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 SRIP30626 198 aa10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 RPL32P62910 135 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 GAGE1Q13065 139 aa10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 GAGE4Q13068 117 aa10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 GAGE5Q13069 117 aa10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 GAGE13Q4V321 117 aa10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 LYPD5Q6UWN5 251 aa10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 ZNRF2Q8NHG8 242 aa10.19□□□□□ -0.78
SNRPA1-207ENST00000559309 SMKR1H3BMG3 65 aa10.18□□□□□ -0.78
SNRPA1-207ENST00000559309 SCO1O75880 301 aa10.18□□□□□ -0.78
SNRPA1-207ENST00000559309 LGALS9CQ6DKI2 356 aa10.18□□□□□ -0.78
SNRPA1-207ENST00000559309 ATP6V0E2Q8NHE4 81 aa10.18□□□□□ -0.78
SNRPA1-207ENST00000559309 UPK3BQ9BT76 320 aa10.18□□□□□ -0.78
SNRPA1-207ENST00000559309 HYDINQ4G0P3 5121 aa10.18□□□□□ -0.78
SNRPA1-207ENST00000559309 TRBV27A0A0K0K1C4 114 aa10.17□□□□□ -0.78
SNRPA1-207ENST00000559309 D6R8Y8 96 aa10.17□□□□□ -0.78
SNRPA1-207ENST00000559309 NCR2O95944 276 aa10.17□□□□□ -0.78
SNRPA1-207ENST00000559309 PPP1R17O96001 155 aa10.17□□□□□ -0.78
SNRPA1-207ENST00000559309 DAZ4Q86SG3 579 aaKnown RBP10.17□□□□□ -0.78
SNRPA1-207ENST00000559309 GTSF1LQ9H1H1 148 aa10.17□□□□□ -0.78
SNRPA1-207ENST00000559309 DAZ3Q9NR90 486 aaKnown RBP10.17□□□□□ -0.78
SNRPA1-207ENST00000559309 LAMTOR2Q9Y2Q5 125 aa10.17□□□□□ -0.78
SNRPA1-207ENST00000559309 LINC00588Q9Y4M8 146 aa10.17□□□□□ -0.78
SNRPA1-207ENST00000559309 CKS2P33552 79 aa10.16□□□□□ -0.78
SNRPA1-207ENST00000559309 OR10J3Q5JRS4 329 aa10.16□□□□□ -0.78
SNRPA1-207ENST00000559309 NTM-AS1Q6ZSK4 140 aa10.16□□□□□ -0.78
SNRPA1-207ENST00000559309 ORMDL3Q8N138 153 aa10.16□□□□□ -0.78
SNRPA1-207ENST00000559309 LINC00476Q8WZB0 136 aa10.16□□□□□ -0.78
SNRPA1-207ENST00000559309 C20orf78Q9BR46 151 aa10.16□□□□□ -0.78
SNRPA1-207ENST00000559309 TMEM70Q9BUB7 260 aa10.16□□□□□ -0.78
SNRPA1-207ENST00000559309 MRPS16Q9Y3D3 137 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-207ENST00000559309 DNAH2Q9P225 4427 aa10.16□□□□□ -0.78
SNRPA1-207ENST00000559309 SDHAF1A6NFY7 115 aa10.15□□□□□ -0.78
SNRPA1-207ENST00000559309 TNFRSF6BO95407 300 aa10.15□□□□□ -0.78
SNRPA1-207ENST00000559309 NPYP01303 97 aa10.15□□□□□ -0.78
SNRPA1-207ENST00000559309 MRPL18Q9H0U6 180 aaKnown RBP10.15□□□□□ -0.78
SNRPA1-207ENST00000559309 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.78
SNRPA1-207ENST00000559309 IGLV2-18A0A075B6J9 118 aa10.14□□□□□ -0.79
SNRPA1-207ENST00000559309 APCSP02743 223 aa10.14□□□□□ -0.79
SNRPA1-207ENST00000559309 SUMO2P61956 95 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-207ENST00000559309 LELP1Q5T871 98 aa10.14□□□□□ -0.79
SNRPA1-207ENST00000559309 PRELID3AQ96N28 172 aa10.14□□□□□ -0.79
SNRPA1-207ENST00000559309 ALKBH7Q9BT30 221 aaPredicted RBP10.14□□□□□ -0.79
SNRPA1-207ENST00000559309 CCL18P55774 89 aa10.13□□□□□ -0.79
SNRPA1-207ENST00000559309 ST20Q9HBF5 79 aa10.13□□□□□ -0.79
SNRPA1-207ENST00000559309 TRBV6-8A0A0A6YYG3 113 aa10.12□□□□□ -0.79
SNRPA1-207ENST00000559309 IQCJQ1A5X6 159 aa10.12□□□□□ -0.79
SNRPA1-207ENST00000559309 TMEM97Q5BJF2 176 aa10.12□□□□□ -0.79
SNRPA1-207ENST00000559309 IGHV3-38A0A0C4DH36 116 aa10.11□□□□□ -0.79
SNRPA1-207ENST00000559309 TSHBP01222 138 aa10.11□□□□□ -0.79
SNRPA1-207ENST00000559309 RAB5AP20339 215 aa10.11□□□□□ -0.79
SNRPA1-207ENST00000559309 KIAA1644Q3SXP7 199 aa10.11□□□□□ -0.79
SNRPA1-207ENST00000559309 SMIM2Q9BVW6 85 aa10.11□□□□□ -0.79
SNRPA1-207ENST00000559309 TRAPPC1Q9Y5R8 145 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms