RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 LOC100131303A0A0U1RQF7 123 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 M0QY20 66 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 HLA-DQA1P01909 254 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 MT-ND6P03923 174 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 P0DMU3 169 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 FAM231AP0DMU4 169 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 FAM231CP0DMU5 169 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 RAB4AP20338 218 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 CKS2P33552 79 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 MRPL51Q4U2R6 128 aaKnown RBP4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 CASC10Q5T4H9 136 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 FRZBQ92765 325 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 MRAP2Q96G30 205 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 RNF185Q96GF1 192 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 TNFRSF18Q9Y5U5 241 aa4.61□□□□□ -1.67
CHRNA3-204ENST00000559002 VPS13DQ5THJ4 4388 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 A0A096LPF7 62 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 SMKR1H3BMG3 65 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 NCR2O95944 276 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 PPP1R17O96001 155 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 APCSP02743 223 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 PPBPP02775 128 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 OR10J3Q5JRS4 329 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 TMEM136Q6ZRR5 245 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 NEGR1Q7Z3B1 354 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 SH2D6Q7Z4S9 175 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 NEXN-AS1Q8NBZ9 246 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 ZNRF2Q8NHG8 242 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 DNAJC30Q96LL9 226 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 YPEL4Q96NS1 127 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 GNB1LQ9BYB4 327 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 NIT2Q9NQR4 276 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 APLNQ9ULZ1 77 aa4.6□□□□□ -1.67
CHRNA3-204ENST00000559002 TRBV7-3A0A075B6L6 115 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 D6R8Y8 96 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 UBE2D3P61077 147 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 UBE2D2P62837 147 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 FABP9Q0Z7S8 132 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 UBE2DNLQ8IWF7 75 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 ORMDL3Q8N138 153 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 ATP6V0E2Q8NHE4 81 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 RPL39LQ96EH5 51 aaKnown RBP4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 PRELID3AQ96N28 172 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 MRPL18Q9H0U6 180 aaKnown RBP4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 ST20Q9HBF5 79 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 TRAPPC1Q9Y5R8 145 aa4.59□□□□□ -1.67
CHRNA3-204ENST00000559002 NACAE9PAV3 2078 aa4.58□□□□□ -1.68
CHRNA3-204ENST00000559002 SDHAF1A6NFY7 115 aa4.58□□□□□ -1.68
CHRNA3-204ENST00000559002 LINC00694P0DN24 101 aa4.58□□□□□ -1.68
CHRNA3-204ENST00000559002 CCL18P55774 89 aa4.58□□□□□ -1.68
CHRNA3-204ENST00000559002 DAZ4Q86SG3 579 aaKnown RBP4.58□□□□□ -1.68
CHRNA3-204ENST00000559002 DAZ3Q9NR90 486 aaKnown RBP4.58□□□□□ -1.68
CHRNA3-204ENST00000559002 Q9UF83 564 aa4.58□□□□□ -1.68
CHRNA3-204ENST00000559002 LAMTOR2Q9Y2Q5 125 aa4.58□□□□□ -1.68
CHRNA3-204ENST00000559002 IGHV3-38A0A0C4DH36 116 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 TRBV6-5A0A0K0K1A5 114 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 PHOX2AO14813 284 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 GAS8-AS1O95177 125 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 TNFRSF6BO95407 300 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 NPYP01303 97 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 PMCHP20382 165 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 RPS10P46783 165 aaKnown RBP4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 SUMO2P61956 95 aaKnown RBP4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 COTL1Q14019 142 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 KIAA1644Q3SXP7 199 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 TMEM97Q5BJF2 176 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 NRACQ8N912 160 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 LYSTQ99698 3801 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 GTSF1LQ9H1H1 148 aa4.57□□□□□ -1.68
CHRNA3-204ENST00000559002 TRAV8-6A0A0B4J262 113 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 COLCA2A8K830 154 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 I3L3M4 83 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 VCYO14598 125 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 RAB5AP20339 215 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 FCER1GP30273 86 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 TIRAPP58753 221 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 ESRGQ1W209 222 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 LYPD5Q6UWN5 251 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 KIR2DL4Q99706 377 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 C20orf78Q9BR46 151 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 TMEM70Q9BUB7 260 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 MAP1LC3AQ9H492 121 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 DNAH6Q9C0G6 4158 aa4.56□□□□□ -1.68
CHRNA3-204ENST00000559002 TRBV25-1A0A075B6N4 114 aa4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 IGHV1-24A0A0C4DH33 117 aa4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 LOC389332A0A1B0GUA5 103 aa4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 TCAPO15273 167 aa4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 AMTP48728 403 aa4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 POLR2KP53803 58 aaKnown RBP4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 RPL32P62910 135 aaKnown RBP4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 LELP1Q5T871 98 aa4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 LGALS9CQ6DKI2 356 aa4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 DEFB104AQ8WTQ1 72 aa4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 ALKBH7Q9BT30 221 aaPredicted RBP4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 SMIM2Q9BVW6 85 aa4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 MRPS16Q9Y3D3 137 aaKnown RBP4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 LINC00588Q9Y4M8 146 aa4.55□□□□□ -1.68
CHRNA3-204ENST00000559002 SACSQ9NZJ4 4579 aa4.54□□□□□ -1.68
CHRNA3-204ENST00000559002 TRBV6-8A0A0A6YYG3 113 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms