RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CYTL1Q9NRR1 136 aa5.36□□□□□ -1.55
TRAF3-205ENST00000558700 TMSB15BA0A087X1C1 80 aa5.35□□□□□ -1.55
TRAF3-205ENST00000558700 UMAD1C9J7I0 102 aa5.35□□□□□ -1.55
TRAF3-205ENST00000558700 S100A9P06702 114 aaKnown RBP5.35□□□□□ -1.55
TRAF3-205ENST00000558700 CXCL1P09341 107 aa5.35□□□□□ -1.55
TRAF3-205ENST00000558700 CRIP1P50238 77 aa5.35□□□□□ -1.55
TRAF3-205ENST00000558700 DAZ4Q86SG3 579 aaKnown RBP5.35□□□□□ -1.55
TRAF3-205ENST00000558700 NIT1Q86X76 327 aa5.35□□□□□ -1.55
TRAF3-205ENST00000558700 KCNRGQ8N5I3 272 aa5.35□□□□□ -1.55
TRAF3-205ENST00000558700 FAM213BQ8TBF2 198 aa5.35□□□□□ -1.55
TRAF3-205ENST00000558700 SFRP2Q96HF1 295 aa5.35□□□□□ -1.55
TRAF3-205ENST00000558700 DAZ3Q9NR90 486 aaKnown RBP5.35□□□□□ -1.55
TRAF3-205ENST00000558700 DMBT1Q9UGM3 2413 aaPredicted RBP5.34□□□□□ -1.55
TRAF3-205ENST00000558700 A0A087WX48 190 aa5.34□□□□□ -1.55
TRAF3-205ENST00000558700 KANTRA0A1W2PQU2 76 aa5.34□□□□□ -1.55
TRAF3-205ENST00000558700 BCL2L11O43521 198 aa5.34□□□□□ -1.55
TRAF3-205ENST00000558700 SMR3BP02814 79 aaPredicted RBP5.34□□□□□ -1.55
TRAF3-205ENST00000558700 EIF5AP63241 154 aaKnown RBP5.34□□□□□ -1.55
TRAF3-205ENST00000558700 HAMPP81172 84 aa5.34□□□□□ -1.55
TRAF3-205ENST00000558700 WFDC2Q14508 124 aa5.34□□□□□ -1.55
TRAF3-205ENST00000558700 ELOBQ15370 118 aa5.34□□□□□ -1.55
TRAF3-205ENST00000558700 ZNF56Q15929 161 aa5.34□□□□□ -1.55
TRAF3-205ENST00000558700 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.34□□□□□ -1.55
TRAF3-205ENST00000558700 SFT2D1Q8WV19 159 aa5.34□□□□□ -1.55
TRAF3-205ENST00000558700 ZNF471Q9BX82 626 aaPredicted RBP5.34□□□□□ -1.55
TRAF3-205ENST00000558700 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.33□□□□□ -1.56
TRAF3-205ENST00000558700 TRBV7-3A0A075B6L6 115 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 IGKV2D-24A0A075B6R9 120 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 A0A0D9SG52 128 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 SMLR1H3BR10 107 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 LECT2O14960 151 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 UBE2D3P61077 147 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 PKIAP61925 76 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 UBE2D2P62837 147 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 OR10AG1Q8NH19 301 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 MBD3L1Q8WWY6 194 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 UBE2WQ96B02 151 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 Q9UF83 564 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 KLK12Q9UKR0 248 aa5.33□□□□□ -1.56
TRAF3-205ENST00000558700 A0A1B0GV50 99 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 HMSDA8MTL9 139 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 SNAI2O43623 268 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 CRPP02741 224 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 RAB4BP61018 213 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 RPL19P84098 196 aaKnown RBP5.32□□□□□ -1.56
TRAF3-205ENST00000558700 Q0VG73 95 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 SPANXN1Q5VSR9 72 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 PRR27Q6MZM9 219 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 Q6ZSA8 131 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 BAGE2Q86Y30 109 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 OR10G8Q8NGN5 311 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 BAALCQ8WXS3 180 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 AP1S3Q96PC3 154 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 MANBALQ9NQG1 85 aa5.32□□□□□ -1.56
TRAF3-205ENST00000558700 RBFOX3A6NFN3 312 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 OR5AL1P0C617 328 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 UBE2V1Q13404 147 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 C14orf177Q52M58 125 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 TMEM97Q5BJF2 176 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 GAGE2AQ6NT46 116 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 ATRAIDQ6UW56 229 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 Q8N976 141 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
TRAF3-205ENST00000558700 TRBV6-8A0A0A6YYG3 113 aa5.3□□□□□ -1.56
TRAF3-205ENST00000558700 TEX46H3BTG2 121 aa5.3□□□□□ -1.56
TRAF3-205ENST00000558700 SMIM17P0DL12 118 aa5.3□□□□□ -1.56
TRAF3-205ENST00000558700 RPL35P42766 123 aaKnown RBP5.3□□□□□ -1.56
TRAF3-205ENST00000558700 NEXN-AS1Q8NBZ9 246 aa5.3□□□□□ -1.56
TRAF3-205ENST00000558700 C11orf52Q96A22 123 aa5.3□□□□□ -1.56
TRAF3-205ENST00000558700 TMEM262E9PQX1 116 aa5.29□□□□□ -1.56
TRAF3-205ENST00000558700 ANGP03950 147 aaKnown RBP5.29□□□□□ -1.56
TRAF3-205ENST00000558700 RAB5CP51148 216 aa5.29□□□□□ -1.56
TRAF3-205ENST00000558700 RPS20P60866 119 aaKnown RBP5.29□□□□□ -1.56
TRAF3-205ENST00000558700 MPV17L2Q567V2 206 aa5.29□□□□□ -1.56
TRAF3-205ENST00000558700 EIF5AL1Q6IS14 154 aaKnown RBP5.29□□□□□ -1.56
TRAF3-205ENST00000558700 TMUB2Q71RG4 321 aa5.29□□□□□ -1.56
TRAF3-205ENST00000558700 C15orf54Q8N8G6 183 aa5.29□□□□□ -1.56
TRAF3-205ENST00000558700 CHCHD5Q9BSY4 110 aa5.29□□□□□ -1.56
TRAF3-205ENST00000558700 GNG13Q9P2W3 67 aa5.29□□□□□ -1.56
TRAF3-205ENST00000558700 FLG2Q5D862 2391 aaPredicted RBP5.29□□□□□ -1.56
TRAF3-205ENST00000558700 SRRM2Q9UQ35 2752 aaKnown RBP5.28□□□□□ -1.56
TRAF3-205ENST00000558700 TRAV1-1A0A0B4J248 108 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 MUC21A0A0G2JKD1 596 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 MUC21A0A140T8X8 626 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 XKRY2A2RUG3 117 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 H7C1H1 209 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 IFNA1P01562 189 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 HLA-DQA1P01909 254 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 MIAQ16674 131 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 CENPWQ5EE01 88 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 XP32Q5T750 250 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 SCXQ7RTU7 201 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 FER1L6-AS1Q8NA97 138 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 SMIM12Q96EX1 92 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 DNAJC30Q96LL9 226 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 DERL1Q9BUN8 251 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 TPPP3Q9BW30 176 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 VAX2Q9UIW0 290 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms