RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 A0A1B0GUT8 65 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 F5H697 171 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 F8W036 122 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 M0QY20 66 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 SMIM17P0DL12 118 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 C10orf91Q5T1B1 145 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 ATP6V0E2Q8NHE4 81 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 SEC11CQ9BY50 192 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 DPH3P1Q9H4G8 78 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 Q9H8V8 135 aa10.6□□□□□ -0.71
LINC01220-201ENST00000558575 TRBV10-1A0A0K0K1A3 114 aa10.59□□□□□ -0.71
LINC01220-201ENST00000558575 MGPP08493 103 aa10.59□□□□□ -0.71
LINC01220-201ENST00000558575 TIRAPP58753 221 aa10.59□□□□□ -0.71
LINC01220-201ENST00000558575 Q6ZR54 194 aa10.59□□□□□ -0.71
LINC01220-201ENST00000558575 SH2D6Q7Z4S9 175 aa10.59□□□□□ -0.71
LINC01220-201ENST00000558575 NEXN-AS1Q8NBZ9 246 aa10.59□□□□□ -0.71
LINC01220-201ENST00000558575 NAT8BQ9UHF3 227 aa10.59□□□□□ -0.71
LINC01220-201ENST00000558575 UBE2D3P61077 147 aa10.58□□□□□ -0.72
LINC01220-201ENST00000558575 UBE2D2P62837 147 aa10.58□□□□□ -0.72
LINC01220-201ENST00000558575 TRBV7-3A0A075B6L6 115 aa10.57□□□□□ -0.72
LINC01220-201ENST00000558575 GTSF1LQ9H1H1 148 aa10.57□□□□□ -0.72
LINC01220-201ENST00000558575 PPP1R2P9O14990 202 aa10.56□□□□□ -0.72
LINC01220-201ENST00000558575 MT-ND4LP03901 98 aa10.56□□□□□ -0.72
LINC01220-201ENST00000558575 RPL36AP83881 106 aaKnown RBP10.56□□□□□ -0.72
LINC01220-201ENST00000558575 RIGQ13278 110 aa10.56□□□□□ -0.72
LINC01220-201ENST00000558575 GATD1Q8NB37 220 aa10.56□□□□□ -0.72
LINC01220-201ENST00000558575 RPL36ALQ969Q0 106 aaKnown RBP10.56□□□□□ -0.72
LINC01220-201ENST00000558575 ANAPC16Q96DE5 110 aa10.56□□□□□ -0.72
LINC01220-201ENST00000558575 RNF185Q96GF1 192 aa10.56□□□□□ -0.72
LINC01220-201ENST00000558575 KRTAP1-5Q9BYS1 174 aa10.56□□□□□ -0.72
LINC01220-201ENST00000558575 SRRM2Q9UQ35 2752 aaKnown RBP10.55□□□□□ -0.72
LINC01220-201ENST00000558575 TRAV26-2A0A0B4J265 109 aa10.55□□□□□ -0.72
LINC01220-201ENST00000558575 NBDYA0A0U1RRE5 68 aa10.55□□□□□ -0.72
LINC01220-201ENST00000558575 C16orf90A8MZG2 172 aa10.55□□□□□ -0.72
LINC01220-201ENST00000558575 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
LINC01220-201ENST00000558575 WFDC10BQ8IUB3 73 aa10.55□□□□□ -0.72
LINC01220-201ENST00000558575 BORCS7Q96B45 105 aa10.55□□□□□ -0.72
LINC01220-201ENST00000558575 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
LINC01220-201ENST00000558575 CARHSP1Q9Y2V2 147 aaKnown RBP10.55□□□□□ -0.72
LINC01220-201ENST00000558575 SIVA1O15304 175 aa10.54□□□□□ -0.72
LINC01220-201ENST00000558575 LELP1Q5T871 98 aa10.54□□□□□ -0.72
LINC01220-201ENST00000558575 RASL11AQ6T310 242 aa10.54□□□□□ -0.72
LINC01220-201ENST00000558575 IGHV3-38A0A0C4DH36 116 aa10.53□□□□□ -0.72
LINC01220-201ENST00000558575 A0A1B0GXF2 115 aa10.53□□□□□ -0.72
LINC01220-201ENST00000558575 RAB4AP20338 218 aa10.53□□□□□ -0.72
LINC01220-201ENST00000558575 SMIM15Q7Z3B0 74 aa10.53□□□□□ -0.72
LINC01220-201ENST00000558575 DNAJC30Q96LL9 226 aa10.53□□□□□ -0.72
LINC01220-201ENST00000558575 NIT2Q9NQR4 276 aa10.53□□□□□ -0.72
LINC01220-201ENST00000558575 H7C1H1 209 aa10.52□□□□□ -0.73
LINC01220-201ENST00000558575 CAMPP49913 170 aa10.52□□□□□ -0.73
LINC01220-201ENST00000558575 MRPL54Q6P161 138 aaKnown RBP10.52□□□□□ -0.73
LINC01220-201ENST00000558575 AMN1Q8IY45 258 aa10.52□□□□□ -0.73
LINC01220-201ENST00000558575 DNAH10OSP0CZ25 163 aa10.51□□□□□ -0.73
LINC01220-201ENST00000558575 NTM-AS1Q6ZSK4 140 aa10.51□□□□□ -0.73
LINC01220-201ENST00000558575 RPL39LQ96EH5 51 aaKnown RBP10.51□□□□□ -0.73
LINC01220-201ENST00000558575 FLG2Q5D862 2391 aaPredicted RBP10.51□□□□□ -0.73
LINC01220-201ENST00000558575 DNAH5Q8TE73 4624 aa10.51□□□□□ -0.73
LINC01220-201ENST00000558575 C7orf77A4D0Y5 90 aa10.5□□□□□ -0.73
LINC01220-201ENST00000558575 OR10J3Q5JRS4 329 aa10.5□□□□□ -0.73
LINC01220-201ENST00000558575 FAM104BQ5XKR9 115 aa10.5□□□□□ -0.73
LINC01220-201ENST00000558575 SLC7A5P1Q8MH63 180 aa10.5□□□□□ -0.73
LINC01220-201ENST00000558575 Q8N3U1 123 aa10.5□□□□□ -0.73
LINC01220-201ENST00000558575 CLRN3Q8NCR9 226 aa10.5□□□□□ -0.73
LINC01220-201ENST00000558575 CTDSP1Q9GZU7 261 aa10.5□□□□□ -0.73
LINC01220-201ENST00000558575 TNFRSF18Q9Y5U5 241 aa10.5□□□□□ -0.73
LINC01220-201ENST00000558575 TRAV8-6A0A0B4J262 113 aa10.49□□□□□ -0.73
LINC01220-201ENST00000558575 A0A1B0GW15 77 aa10.49□□□□□ -0.73
LINC01220-201ENST00000558575 FRZBQ92765 325 aa10.49□□□□□ -0.73
LINC01220-201ENST00000558575 MYCBP2O75592 4640 aa10.49□□□□□ -0.73
LINC01220-201ENST00000558575 A0A087WWC5 75 aa10.48□□□□□ -0.73
LINC01220-201ENST00000558575 TRBV6-8A0A0A6YYG3 113 aa10.48□□□□□ -0.73
LINC01220-201ENST00000558575 SMKR1H3BMG3 65 aa10.48□□□□□ -0.73
LINC01220-201ENST00000558575 RPS10P46783 165 aaKnown RBP10.48□□□□□ -0.73
LINC01220-201ENST00000558575 HBBP68871 147 aa10.48□□□□□ -0.73
LINC01220-201ENST00000558575 MRPL51Q4U2R6 128 aaKnown RBP10.48□□□□□ -0.73
LINC01220-201ENST00000558575 DAZ4Q86SG3 579 aaKnown RBP10.48□□□□□ -0.73
LINC01220-201ENST00000558575 DEFB104AQ8WTQ1 72 aa10.48□□□□□ -0.73
LINC01220-201ENST00000558575 IMMP2LQ96T52 175 aa10.48□□□□□ -0.73
LINC01220-201ENST00000558575 DAZ3Q9NR90 486 aaKnown RBP10.48□□□□□ -0.73
LINC01220-201ENST00000558575 TNP2Q05952 138 aa10.47□□□□□ -0.73
LINC01220-201ENST00000558575 LINC01556Q5JQF7 62 aa10.47□□□□□ -0.73
LINC01220-201ENST00000558575 ATP5L2Q7Z4Y8 100 aa10.47□□□□□ -0.73
LINC01220-201ENST00000558575 TMEM242Q9NWH2 141 aa10.47□□□□□ -0.73
LINC01220-201ENST00000558575 TRBV6-5A0A0K0K1A5 114 aa10.46□□□□□ -0.73
LINC01220-201ENST00000558575 APOC3P02656 99 aa10.46□□□□□ -0.73
LINC01220-201ENST00000558575 NRACQ8N912 160 aa10.46□□□□□ -0.73
LINC01220-201ENST00000558575 MRAP2Q96G30 205 aa10.46□□□□□ -0.73
LINC01220-201ENST00000558575 NCR2O95944 276 aa10.45□□□□□ -0.74
LINC01220-201ENST00000558575 IGHV3-30P01768 117 aa10.45□□□□□ -0.74
LINC01220-201ENST00000558575 IGHV3-33P01772 117 aa10.45□□□□□ -0.74
LINC01220-201ENST00000558575 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
LINC01220-201ENST00000558575 IGHV3-30-5P0DP03 117 aa10.45□□□□□ -0.74
LINC01220-201ENST00000558575 TTC32Q5I0X7 151 aa10.45□□□□□ -0.74
LINC01220-201ENST00000558575 C1orf134Q5TEV5 83 aa10.45□□□□□ -0.74
LINC01220-201ENST00000558575 NIT1Q86X76 327 aa10.45□□□□□ -0.74
LINC01220-201ENST00000558575 BTF3L4Q96K17 158 aa10.45□□□□□ -0.74
LINC01220-201ENST00000558575 SDHAF1A6NFY7 115 aa10.44□□□□□ -0.74
LINC01220-201ENST00000558575 S100A8P05109 93 aa10.44□□□□□ -0.74
LINC01220-201ENST00000558575 POLR2KP53803 58 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms