RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 MAP1LC3AQ9H492 121 aa10.49□□□□□ -0.73
VPS18-202ENST00000558474 H3BNG1 76 aa10.48□□□□□ -0.73
VPS18-202ENST00000558474 NPYP01303 97 aa10.48□□□□□ -0.73
VPS18-202ENST00000558474 HOXA5P20719 270 aa10.48□□□□□ -0.73
VPS18-202ENST00000558474 CRYBA4P53673 196 aa10.48□□□□□ -0.73
VPS18-202ENST00000558474 SUMO2P61956 95 aaKnown RBP10.48□□□□□ -0.73
VPS18-202ENST00000558474 Q6ZSN1 163 aa10.48□□□□□ -0.73
VPS18-202ENST00000558474 C18orf32Q8TCD1 76 aa10.48□□□□□ -0.73
VPS18-202ENST00000558474 ST20Q9HBF5 79 aa10.48□□□□□ -0.73
VPS18-202ENST00000558474 HUWE1Q7Z6Z7 4374 aaKnown RBP10.47□□□□□ -0.73
VPS18-202ENST00000558474 DNAH9Q9NYC9 4486 aa10.47□□□□□ -0.73
VPS18-202ENST00000558474 GAS8-AS1O95177 125 aa10.47□□□□□ -0.73
VPS18-202ENST00000558474 RPL36AP83881 106 aaKnown RBP10.47□□□□□ -0.73
VPS18-202ENST00000558474 Q6ZTC4 211 aa10.47□□□□□ -0.73
VPS18-202ENST00000558474 RPL36ALQ969Q0 106 aaKnown RBP10.47□□□□□ -0.73
VPS18-202ENST00000558474 TNFRSF18Q9Y5U5 241 aa10.47□□□□□ -0.73
VPS18-202ENST00000558474 TRBV7-3A0A075B6L6 115 aa10.46□□□□□ -0.73
VPS18-202ENST00000558474 TRAV10A0A0B4J240 114 aa10.46□□□□□ -0.73
VPS18-202ENST00000558474 F5H768 121 aa10.46□□□□□ -0.73
VPS18-202ENST00000558474 K7EMI3 77 aa10.46□□□□□ -0.73
VPS18-202ENST00000558474 TCAPO15273 167 aa10.46□□□□□ -0.73
VPS18-202ENST00000558474 POLR2KP53803 58 aaKnown RBP10.46□□□□□ -0.73
VPS18-202ENST00000558474 NANOS2P60321 138 aaKnown RBP10.46□□□□□ -0.73
VPS18-202ENST00000558474 NEXN-AS1Q8NBZ9 246 aa10.46□□□□□ -0.73
VPS18-202ENST00000558474 RPL39LQ96EH5 51 aaKnown RBP10.46□□□□□ -0.73
VPS18-202ENST00000558474 NXT2Q9NPJ8 142 aaKnown RBP10.46□□□□□ -0.73
VPS18-202ENST00000558474 TRBV27A0A0K0K1C4 114 aa10.45□□□□□ -0.74
VPS18-202ENST00000558474 VCYO14598 125 aa10.45□□□□□ -0.74
VPS18-202ENST00000558474 PAX4O43316 350 aa10.45□□□□□ -0.74
VPS18-202ENST00000558474 PMCHP20382 165 aa10.45□□□□□ -0.74
VPS18-202ENST00000558474 COA6Q5JTJ3 125 aaKnown RBP10.45□□□□□ -0.74
VPS18-202ENST00000558474 TENM3Q9P273 2699 aa10.44□□□□□ -0.74
VPS18-202ENST00000558474 SDHAF1A6NFY7 115 aa10.44□□□□□ -0.74
VPS18-202ENST00000558474 SH2D6Q7Z4S9 175 aa10.44□□□□□ -0.74
VPS18-202ENST00000558474 DAZ4Q86SG3 579 aaKnown RBP10.44□□□□□ -0.74
VPS18-202ENST00000558474 Q8N8P6 123 aa10.44□□□□□ -0.74
VPS18-202ENST00000558474 PRSS3P2Q8NHM4 247 aa10.44□□□□□ -0.74
VPS18-202ENST00000558474 TMEM70Q9BUB7 260 aa10.44□□□□□ -0.74
VPS18-202ENST00000558474 SMIM2Q9BVW6 85 aa10.44□□□□□ -0.74
VPS18-202ENST00000558474 DAZ3Q9NR90 486 aaKnown RBP10.44□□□□□ -0.74
VPS18-202ENST00000558474 DEFB131BA0A096LNP1 70 aa10.43□□□□□ -0.74
VPS18-202ENST00000558474 LINC01546A6NGU7 62 aa10.43□□□□□ -0.74
VPS18-202ENST00000558474 P0DMU3 169 aa10.43□□□□□ -0.74
VPS18-202ENST00000558474 FAM231AP0DMU4 169 aa10.43□□□□□ -0.74
VPS18-202ENST00000558474 FAM231CP0DMU5 169 aa10.43□□□□□ -0.74
VPS18-202ENST00000558474 LINC00694P0DN24 101 aa10.43□□□□□ -0.74
VPS18-202ENST00000558474 HTN3P15516 51 aa10.43□□□□□ -0.74
VPS18-202ENST00000558474 BAGE3Q86Y29 109 aa10.43□□□□□ -0.74
VPS18-202ENST00000558474 CHCHD1Q96BP2 118 aaKnown RBP10.43□□□□□ -0.74
VPS18-202ENST00000558474 IGLV2-18A0A075B6J9 118 aa10.42□□□□□ -0.74
VPS18-202ENST00000558474 TRAV26-1A0A087WT03 109 aa10.42□□□□□ -0.74
VPS18-202ENST00000558474 I3L3M4 83 aa10.42□□□□□ -0.74
VPS18-202ENST00000558474 LINC00614P0C842 121 aa10.42□□□□□ -0.74
VPS18-202ENST00000558474 UBE2D3P61077 147 aa10.42□□□□□ -0.74
VPS18-202ENST00000558474 UBE2D2P62837 147 aa10.42□□□□□ -0.74
VPS18-202ENST00000558474 TMEM97Q5BJF2 176 aa10.42□□□□□ -0.74
VPS18-202ENST00000558474 ZNRF2Q8NHG8 242 aa10.42□□□□□ -0.74
VPS18-202ENST00000558474 VSIG2Q96IQ7 327 aa10.42□□□□□ -0.74
VPS18-202ENST00000558474 KIR2DL4Q99706 377 aa10.42□□□□□ -0.74
VPS18-202ENST00000558474 COL7A1Q02388 2944 aa10.41□□□□□ -0.74
VPS18-202ENST00000558474 LOC389332A0A1B0GUA5 103 aa10.41□□□□□ -0.74
VPS18-202ENST00000558474 S100A6P06703 90 aa10.41□□□□□ -0.74
VPS18-202ENST00000558474 ESDP10768 282 aa10.41□□□□□ -0.74
VPS18-202ENST00000558474 GYPEP15421 78 aa10.41□□□□□ -0.74
VPS18-202ENST00000558474 IFI27P40305 119 aaPredicted RBP10.41□□□□□ -0.74
VPS18-202ENST00000558474 MRPL23Q16540 153 aaKnown RBP10.41□□□□□ -0.74
VPS18-202ENST00000558474 IQCJQ1A5X6 159 aa10.41□□□□□ -0.74
VPS18-202ENST00000558474 FA2HQ7L5A8 372 aa10.41□□□□□ -0.74
VPS18-202ENST00000558474 NIT1Q86X76 327 aa10.41□□□□□ -0.74
VPS18-202ENST00000558474 G0S2P27469 103 aa10.4□□□□□ -0.74
VPS18-202ENST00000558474 NDUFA6P56556 154 aa10.4□□□□□ -0.74
VPS18-202ENST00000558474 ORMDL2Q53FV1 153 aa10.4□□□□□ -0.74
VPS18-202ENST00000558474 AP5S1Q9NUS5 200 aa10.4□□□□□ -0.74
VPS18-202ENST00000558474 ICOSQ9Y6W8 199 aa10.4□□□□□ -0.74
VPS18-202ENST00000558474 GAGE12JA6NER3 117 aa10.39□□□□□ -0.75
VPS18-202ENST00000558474 GAGE1Q13065 139 aa10.39□□□□□ -0.75
VPS18-202ENST00000558474 GAGE4Q13068 117 aa10.39□□□□□ -0.75
VPS18-202ENST00000558474 GAGE5Q13069 117 aa10.39□□□□□ -0.75
VPS18-202ENST00000558474 GAGE13Q4V321 117 aa10.39□□□□□ -0.75
VPS18-202ENST00000558474 C15orf53Q8NAA6 179 aa10.39□□□□□ -0.75
VPS18-202ENST00000558474 PHLDA1Q8WV24 401 aaPredicted RBP10.39□□□□□ -0.75
VPS18-202ENST00000558474 GTSF1LQ9H1H1 148 aa10.39□□□□□ -0.75
VPS18-202ENST00000558474 Q9UF83 564 aa10.39□□□□□ -0.75
VPS18-202ENST00000558474 PRKDCP78527 4128 aaKnown RBP10.39□□□□□ -0.75
VPS18-202ENST00000558474 A0A0J9YY99 117 aa10.38□□□□□ -0.75
VPS18-202ENST00000558474 LINC01549A6NIU2 74 aa10.38□□□□□ -0.75
VPS18-202ENST00000558474 LAGE3Q14657 143 aa10.38□□□□□ -0.75
VPS18-202ENST00000558474 ATP6V0E2Q8NHE4 81 aa10.38□□□□□ -0.75
VPS18-202ENST00000558474 URB1-AS1Q96HZ7 61 aa10.38□□□□□ -0.75
VPS18-202ENST00000558474 LOC100131303A0A0U1RQF7 123 aa10.37□□□□□ -0.75
VPS18-202ENST00000558474 SERF1AO75920 110 aa10.37□□□□□ -0.75
VPS18-202ENST00000558474 COTL1Q14019 142 aa10.37□□□□□ -0.75
VPS18-202ENST00000558474 RNASEKQ6P5S7 137 aaKnown RBP10.37□□□□□ -0.75
VPS18-202ENST00000558474 A0A096LPF7 62 aa10.36□□□□□ -0.75
VPS18-202ENST00000558474 HSBP1O75506 76 aa10.36□□□□□ -0.75
VPS18-202ENST00000558474 TSHBP01222 138 aa10.36□□□□□ -0.75
VPS18-202ENST00000558474 FCER1GP30273 86 aa10.36□□□□□ -0.75
VPS18-202ENST00000558474 TIRAPP58753 221 aa10.36□□□□□ -0.75
VPS18-202ENST00000558474 LINC00310P59036 64 aa10.36□□□□□ -0.75
VPS18-202ENST00000558474 NEGR1Q7Z3B1 354 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms