RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 P01737 135 aa11.21□□□□□ -0.61
TSPAN3-204ENST00000558394 MBP02144 154 aa11.21□□□□□ -0.61
TSPAN3-204ENST00000558394 F5H697 171 aa11.2□□□□□ -0.62
TSPAN3-204ENST00000558394 CRIP1P50238 77 aa11.2□□□□□ -0.62
TSPAN3-204ENST00000558394 KRTAP10-8P60410 259 aa11.2□□□□□ -0.62
TSPAN3-204ENST00000558394 MAJINQ3KP22 176 aa11.2□□□□□ -0.62
TSPAN3-204ENST00000558394 TRBV6-1A0A0K0K1D8 114 aa11.19□□□□□ -0.62
TSPAN3-204ENST00000558394 A6NHS1 94 aa11.19□□□□□ -0.62
TSPAN3-204ENST00000558394 PEX7O00628 323 aa11.19□□□□□ -0.62
TSPAN3-204ENST00000558394 GZMBP10144 247 aa11.19□□□□□ -0.62
TSPAN3-204ENST00000558394 SPINK6Q6UWN8 80 aa11.19□□□□□ -0.62
TSPAN3-204ENST00000558394 NTM-AS1Q6ZSK4 140 aa11.19□□□□□ -0.62
TSPAN3-204ENST00000558394 ACTR3CQ9C0K3 210 aaPredicted RBP11.19□□□□□ -0.62
TSPAN3-204ENST00000558394 ZFP30Q9Y2G7 519 aa11.19□□□□□ -0.62
TSPAN3-204ENST00000558394 IGKV2-24A0A0C4DH68 120 aa11.18□□□□□ -0.62
TSPAN3-204ENST00000558394 SLPIP03973 132 aa11.18□□□□□ -0.62
TSPAN3-204ENST00000558394 RAB5CP51148 216 aa11.18□□□□□ -0.62
TSPAN3-204ENST00000558394 COX6A2Q02221 97 aa11.18□□□□□ -0.62
TSPAN3-204ENST00000558394 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
TSPAN3-204ENST00000558394 PRR27Q6MZM9 219 aa11.18□□□□□ -0.62
TSPAN3-204ENST00000558394 LYPD6BQ8NI32 183 aa11.18□□□□□ -0.62
TSPAN3-204ENST00000558394 NDUFS6O75380 124 aaKnown RBP11.17□□□□□ -0.62
TSPAN3-204ENST00000558394 UBE2G1P62253 170 aa11.17□□□□□ -0.62
TSPAN3-204ENST00000558394 STPG4Q8N801 248 aa11.17□□□□□ -0.62
TSPAN3-204ENST00000558394 HIST1H2BAQ96A08 127 aa11.17□□□□□ -0.62
TSPAN3-204ENST00000558394 PSMG3Q9BT73 122 aaPredicted RBP11.17□□□□□ -0.62
TSPAN3-204ENST00000558394 ZNF471Q9BX82 626 aaPredicted RBP11.17□□□□□ -0.62
TSPAN3-204ENST00000558394 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
TSPAN3-204ENST00000558394 UBE2G2P60604 165 aa11.16□□□□□ -0.62
TSPAN3-204ENST00000558394 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
TSPAN3-204ENST00000558394 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
TSPAN3-204ENST00000558394 RPS10P46783 165 aaKnown RBP11.15□□□□□ -0.62
TSPAN3-204ENST00000558394 SERF2P84101 59 aa11.15□□□□□ -0.62
TSPAN3-204ENST00000558394 IQCJQ1A5X6 159 aa11.15□□□□□ -0.62
TSPAN3-204ENST00000558394 ZNF674Q2M3X9 581 aa11.15□□□□□ -0.62
TSPAN3-204ENST00000558394 NKX6-2Q9C056 277 aaPredicted RBP11.15□□□□□ -0.62
TSPAN3-204ENST00000558394 ALG5Q9Y673 324 aa11.15□□□□□ -0.62
TSPAN3-204ENST00000558394 SMIM17P0DL12 118 aa11.14□□□□□ -0.63
TSPAN3-204ENST00000558394 ATP6V0CP27449 155 aa11.14□□□□□ -0.63
TSPAN3-204ENST00000558394 COX8CQ7Z4L0 72 aa11.14□□□□□ -0.63
TSPAN3-204ENST00000558394 OR10AG1Q8NH19 301 aa11.14□□□□□ -0.63
TSPAN3-204ENST00000558394 FMC1Q96HJ9 113 aa11.14□□□□□ -0.63
TSPAN3-204ENST00000558394 SPANXN1Q5VSR9 72 aa11.13□□□□□ -0.63
TSPAN3-204ENST00000558394 TNFSF18Q9UNG2 199 aa11.13□□□□□ -0.63
TSPAN3-204ENST00000558394 SULT1A2P50226 295 aa11.12□□□□□ -0.63
TSPAN3-204ENST00000558394 C20orf203Q8NBC4 194 aa11.12□□□□□ -0.63
TSPAN3-204ENST00000558394 PRSS3P2Q8NHM4 247 aa11.12□□□□□ -0.63
TSPAN3-204ENST00000558394 AQP10Q96PS8 301 aa11.12□□□□□ -0.63
TSPAN3-204ENST00000558394 MUC21A0A0G2JKD1 596 aa11.1□□□□□ -0.63
TSPAN3-204ENST00000558394 A0A1B0GUV1 79 aa11.1□□□□□ -0.63
TSPAN3-204ENST00000558394 FAM74A7A6NL05 159 aa11.1□□□□□ -0.63
TSPAN3-204ENST00000558394 UBE2L6O14933 153 aa11.1□□□□□ -0.63
TSPAN3-204ENST00000558394 SSTP61278 116 aa11.1□□□□□ -0.63
TSPAN3-204ENST00000558394 TMEM243Q9BU79 118 aa11.1□□□□□ -0.63
TSPAN3-204ENST00000558394 LINC00474Q9P2X8 69 aa11.1□□□□□ -0.63
TSPAN3-204ENST00000558394 LPAP08519 4548 aa11.09□□□□□ -0.63
TSPAN3-204ENST00000558394 IGLV4-60A0A075B6I1 120 aa11.09□□□□□ -0.63
TSPAN3-204ENST00000558394 MUC21A0A140T8X8 626 aa11.09□□□□□ -0.63
TSPAN3-204ENST00000558394 HIGD2BQ4VC39 106 aa11.09□□□□□ -0.63
TSPAN3-204ENST00000558394 Q6ZRP5 223 aa11.09□□□□□ -0.63
TSPAN3-204ENST00000558394 CTXND1A0A1B0GTU2 59 aa11.08□□□□□ -0.64
TSPAN3-204ENST00000558394 FAM231BA6NCW3 169 aa11.08□□□□□ -0.64
TSPAN3-204ENST00000558394 GAGE12HA6NDE8 117 aa11.08□□□□□ -0.64
TSPAN3-204ENST00000558394 LTAP01374 205 aa11.08□□□□□ -0.64
TSPAN3-204ENST00000558394 C15orf56Q8N910 161 aa11.08□□□□□ -0.64
TSPAN3-204ENST00000558394 AP1S3Q96PC3 154 aa11.08□□□□□ -0.64
TSPAN3-204ENST00000558394 MED28Q9H204 178 aa11.08□□□□□ -0.64
TSPAN3-204ENST00000558394 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
TSPAN3-204ENST00000558394 H7C1H1 209 aa11.07□□□□□ -0.64
TSPAN3-204ENST00000558394 CXCL1P09341 107 aa11.07□□□□□ -0.64
TSPAN3-204ENST00000558394 AKR1C3P42330 323 aa11.07□□□□□ -0.64
TSPAN3-204ENST00000558394 KRTAP9-2Q9BYQ4 174 aa11.07□□□□□ -0.64
TSPAN3-204ENST00000558394 GFRA4Q9GZZ7 299 aa11.07□□□□□ -0.64
TSPAN3-204ENST00000558394 MGPP08493 103 aa11.06□□□□□ -0.64
TSPAN3-204ENST00000558394 SRSF9Q13242 221 aaKnown RBP eCLIP11.06□□□□□ -0.64
TSPAN3-204ENST00000558394 STOML3Q8TAV4 291 aa11.06□□□□□ -0.64
TSPAN3-204ENST00000558394 A0A096LNI7 61 aa11.05□□□□□ -0.64
TSPAN3-204ENST00000558394 IGKV3OR2-268A0A0C4DH90 116 aa11.05□□□□□ -0.64
TSPAN3-204ENST00000558394 A0A0U1RQV1 116 aa11.05□□□□□ -0.64
TSPAN3-204ENST00000558394 SNAI2O43623 268 aa11.05□□□□□ -0.64
TSPAN3-204ENST00000558394 OR5AL1P0C617 328 aa11.05□□□□□ -0.64
TSPAN3-204ENST00000558394 TCEAL7Q9BRU2 100 aa11.05□□□□□ -0.64
TSPAN3-204ENST00000558394 GIPP09681 153 aaPredicted RBP11.04□□□□□ -0.64
TSPAN3-204ENST00000558394 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
TSPAN3-204ENST00000558394 CST9LP1Q5W188 147 aa11.04□□□□□ -0.64
TSPAN3-204ENST00000558394 INO80EQ8NBZ0 244 aaPredicted RBP11.04□□□□□ -0.64
TSPAN3-204ENST00000558394 SSBP4Q9BWG4 385 aaPredicted RBP11.04□□□□□ -0.64
TSPAN3-204ENST00000558394 BORCS7-ASMTA0A0B4J1R7 106 aa11.03□□□□□ -0.64
TSPAN3-204ENST00000558394 NKX2-5P52952 324 aaPredicted RBP11.03□□□□□ -0.64
TSPAN3-204ENST00000558394 Q5BKY6 102 aa11.03□□□□□ -0.64
TSPAN3-204ENST00000558394 RPL7L1Q6DKI1 246 aaKnown RBP11.03□□□□□ -0.64
TSPAN3-204ENST00000558394 FXYD6-FXYD2A0A087WZ82 144 aa11.02□□□□□ -0.65
TSPAN3-204ENST00000558394 M0QY20 66 aa11.02□□□□□ -0.65
TSPAN3-204ENST00000558394 BATF3Q9NR55 127 aa11.02□□□□□ -0.65
TSPAN3-204ENST00000558394 AKR1C8PQ5T2L2 129 aa11.01□□□□□ -0.65
TSPAN3-204ENST00000558394 ZNF664Q8N3J9 261 aa11.01□□□□□ -0.65
TSPAN3-204ENST00000558394 GVQW2A0A096LPI5 108 aaPredicted RBP11□□□□□ -0.65
TSPAN3-204ENST00000558394 AMTP48728 403 aa11□□□□□ -0.65
TSPAN3-204ENST00000558394 FHITP49789 147 aa11□□□□□ -0.65
TSPAN3-204ENST00000558394 COTL1Q14019 142 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms