RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 SMKR1H3BMG3 65 aa4.15□□□□□ -1.75
GABPB1-207ENST00000558335 HILS1P60008 231 aa4.15□□□□□ -1.75
GABPB1-207ENST00000558335 LMO4P61968 165 aa4.15□□□□□ -1.75
GABPB1-207ENST00000558335 RHOHQ15669 191 aa4.15□□□□□ -1.75
GABPB1-207ENST00000558335 C19orf54Q5BKX5 351 aa4.15□□□□□ -1.75
GABPB1-207ENST00000558335 PRR15Q8IV56 129 aa4.15□□□□□ -1.75
GABPB1-207ENST00000558335 NEXN-AS1Q8NBZ9 246 aa4.15□□□□□ -1.75
GABPB1-207ENST00000558335 MRPL35Q9NZE8 188 aaKnown RBP4.15□□□□□ -1.75
GABPB1-207ENST00000558335 TRBV30A0A0K0K1B3 111 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 hADV29S1A0JD25 119 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 PRAC2D3DTV9 90 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 IGHV3-23P01764 117 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 ZFP36P26651 326 aaKnown RBP4.14□□□□□ -1.75
GABPB1-207ENST00000558335 PIK3CD-AS1Q5SR53 167 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 C2orf82Q6UX34 121 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 C2orf66Q6UXQ4 117 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 SCGB1D4Q6XE38 83 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 GPHB5Q86YW7 130 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 LINC00528Q8N1L1 170 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 DAND5Q8N907 189 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 MSRB1Q9NZV6 116 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 S4R3C0 116 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 USP34Q70CQ2 3546 aa4.14□□□□□ -1.75
GABPB1-207ENST00000558335 PLXNB1O43157 2135 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 WDFY3Q8IZQ1 3526 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 C11orf86A6NJI1 115 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 LYRM9A8MSI8 78 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 INAFM2P0DMQ5 153 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 SYNJ2BPP57105 145 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 RPL11P62913 178 aaKnown RBP4.13□□□□□ -1.75
GABPB1-207ENST00000558335 KHDC1LQ5JSQ8 128 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 ZFP2Q6ZN57 461 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 ZFAND2AQ8N6M9 145 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 VSIG2Q96IQ7 327 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 UPK3BQ9BT76 320 aa4.13□□□□□ -1.75
GABPB1-207ENST00000558335 TRBV27A0A0K0K1C4 114 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 A6NDX4 124 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 ZNF815PA8K554 130 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 KLLNB2CW77 178 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 B4DSR2 109 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 SOCS3O14543 225 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 IGLV1-40P01703 118 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 MGPP08493 103 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 CFC1BP0CG36 223 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 CFC1P0CG37 223 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 LGALS3P17931 250 aaKnown RBP4.12□□□□□ -1.75
GABPB1-207ENST00000558335 GRNP28799 593 aaKnown RBP4.12□□□□□ -1.75
GABPB1-207ENST00000558335 RNASE4P34096 147 aaKnown RBP4.12□□□□□ -1.75
GABPB1-207ENST00000558335 CFHR3Q02985 330 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 PRB3Q04118 309 aaPredicted RBP4.12□□□□□ -1.75
GABPB1-207ENST00000558335 NSUN5P1Q3KNT7 163 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 OXLD1Q5BKU9 147 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 C3orf56Q8N813 242 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 IL17DQ8TAD2 202 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 BRK1Q8WUW1 75 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 RHPN1-AS1Q9BWJ2 59 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 BPESC1Q9GZL8 116 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 KLK5Q9Y337 293 aaPredicted RBP4.12□□□□□ -1.75
GABPB1-207ENST00000558335 EYSQ5T1H1 3165 aa4.12□□□□□ -1.75
GABPB1-207ENST00000558335 PRUNE2Q8WUY3 3088 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 IGHV3-35A0A0C4DH35 117 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 IGHV1-58A0A0C4DH39 117 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 A0A0J9YX75 114 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 PLAC8L1A1L4L8 177 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 SDHAF1A6NFY7 115 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 F5H697 171 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 G3V318 75 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 POLR2KP53803 58 aaKnown RBP4.11□□□□□ -1.75
GABPB1-207ENST00000558335 S100A7L2Q5SY68 101 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 IGFL4Q6B9Z1 124 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 ZNF575Q86XF7 245 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 C14orf178Q8N769 122 aaPredicted RBP4.11□□□□□ -1.75
GABPB1-207ENST00000558335 C11orf44Q8N8P7 122 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 DSCR8Q96T75 97 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 CCL19Q99731 98 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 C11orf21Q9P2W6 132 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 POLEQ07864 2286 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 CACNA1HO95180 2353 aa4.11□□□□□ -1.75
GABPB1-207ENST00000558335 ANKHD1Q8IWZ3 2542 aaKnown RBP4.1□□□□□ -1.75
GABPB1-207ENST00000558335 IGKV2D-26A0A0A0MRZ7 120 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 IGHV3-66A0A0C4DH42 116 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 TEX49A0A1B0GTD5 131 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 USP17L23D6RBM5 183 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 I3L3M4 83 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 LEPROTO15243 131 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 LY6HO94772 140 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 MSMBP08118 114 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 WFDC3Q8IUB2 231 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 SLC25A29Q8N8R3 303 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 C10orf105Q8TEF2 133 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 TMEM243Q9BU79 118 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 C16orf95Q9H693 158 aa4.1□□□□□ -1.75
GABPB1-207ENST00000558335 RP1L1Q8IWN7 2480 aaPredicted RBP4.1□□□□□ -1.75
GABPB1-207ENST00000558335 IGHV1OR15-1A0A075B7D0 117 aa4.09□□□□□ -1.75
GABPB1-207ENST00000558335 IGIPA6NJ69 53 aa4.09□□□□□ -1.75
GABPB1-207ENST00000558335 H3BUX3 64 aa4.09□□□□□ -1.75
GABPB1-207ENST00000558335 OXTP01178 125 aa4.09□□□□□ -1.75
GABPB1-207ENST00000558335 IGHV3-33P01772 117 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms