RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 EREGO14944 169 aa6.12□□□□□ -1.43
SPG11-207ENST00000558138 LINC00694P0DN24 101 aa6.12□□□□□ -1.43
SPG11-207ENST00000558138 UBE2D3P61077 147 aa6.12□□□□□ -1.43
SPG11-207ENST00000558138 UBE2D2P62837 147 aa6.12□□□□□ -1.43
SPG11-207ENST00000558138 RASL11AQ6T310 242 aa6.12□□□□□ -1.43
SPG11-207ENST00000558138 Q9HAA7 133 aa6.12□□□□□ -1.43
SPG11-207ENST00000558138 DNAH6Q9C0G6 4158 aa6.12□□□□□ -1.43
SPG11-207ENST00000558138 A0A1B0GUT8 65 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 BTF3P20290 206 aaKnown RBP6.11□□□□□ -1.43
SPG11-207ENST00000558138 TNP2Q05952 138 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 RIGQ13278 110 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 TMEM97Q5BJF2 176 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 LINC01556Q5JQF7 62 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 CLLU1Q5K131 121 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 DAZ4Q86SG3 579 aaKnown RBP6.11□□□□□ -1.43
SPG11-207ENST00000558138 DNAJC30Q96LL9 226 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 CHCHD5Q9BSY4 110 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 GFRA4Q9GZZ7 299 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 DAZ3Q9NR90 486 aaKnown RBP6.11□□□□□ -1.43
SPG11-207ENST00000558138 NAT8BQ9UHF3 227 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 KIF25-AS1Q9Y6Z4 181 aa6.11□□□□□ -1.43
SPG11-207ENST00000558138 TRAV26-2A0A0B4J265 109 aa6.1□□□□□ -1.43
SPG11-207ENST00000558138 CNFNQ9BYD5 112 aa6.1□□□□□ -1.43
SPG11-207ENST00000558138 V9GYV3 84 aa6.1□□□□□ -1.43
SPG11-207ENST00000558138 VPS13DQ5THJ4 4388 aa6.1□□□□□ -1.43
SPG11-207ENST00000558138 TRBV25-1A0A075B6N4 114 aa6.09□□□□□ -1.43
SPG11-207ENST00000558138 TRBV6-8A0A0A6YYG3 113 aa6.09□□□□□ -1.43
SPG11-207ENST00000558138 FAM231BA6NCW3 169 aa6.09□□□□□ -1.43
SPG11-207ENST00000558138 M0QY20 66 aa6.09□□□□□ -1.43
SPG11-207ENST00000558138 UBE2L6O14933 153 aa6.09□□□□□ -1.43
SPG11-207ENST00000558138 CRPP02741 224 aa6.09□□□□□ -1.43
SPG11-207ENST00000558138 PKIAP61925 76 aa6.09□□□□□ -1.43
SPG11-207ENST00000558138 ELOBQ15370 118 aa6.09□□□□□ -1.43
SPG11-207ENST00000558138 NIT2Q9NQR4 276 aa6.09□□□□□ -1.43
SPG11-207ENST00000558138 IGHV1-24A0A0C4DH33 117 aa6.08□□□□□ -1.44
SPG11-207ENST00000558138 PPP1R2P9O14990 202 aa6.08□□□□□ -1.44
SPG11-207ENST00000558138 CAMPP49913 170 aa6.08□□□□□ -1.44
SPG11-207ENST00000558138 FOXA3P55318 350 aaPredicted RBP6.08□□□□□ -1.44
SPG11-207ENST00000558138 PNRC1Q12796 327 aaPredicted RBP6.08□□□□□ -1.44
SPG11-207ENST00000558138 COTL1Q14019 142 aa6.08□□□□□ -1.44
SPG11-207ENST00000558138 NIT1Q86X76 327 aa6.08□□□□□ -1.44
SPG11-207ENST00000558138 NUP35Q8NFH5 326 aa6.08□□□□□ -1.44
SPG11-207ENST00000558138 DEFB104AQ8WTQ1 72 aa6.08□□□□□ -1.44
SPG11-207ENST00000558138 RMI2Q96E14 147 aa6.08□□□□□ -1.44
SPG11-207ENST00000558138 KLK12Q9UKR0 248 aa6.08□□□□□ -1.44
SPG11-207ENST00000558138 TRAV8-3A0A0A6YYJ7 113 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 C16orf90A8MZG2 172 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 IBA57-AS1B1ANH7 110 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 F8W036 122 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 MT-ND4LP03901 98 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 ANGP03950 147 aaKnown RBP6.07□□□□□ -1.44
SPG11-207ENST00000558138 S100A8P05109 93 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 AMTP48728 403 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 IFITM2Q01629 132 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 GAGE6Q13070 117 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 MRPL54Q6P161 138 aaKnown RBP6.07□□□□□ -1.44
SPG11-207ENST00000558138 UQCC3Q6UW78 93 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 SPATA12Q7Z6I5 190 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 COMMD7Q86VX2 200 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 Q8N3U1 123 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 GATD1Q8NB37 220 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 RPL39LQ96EH5 51 aaKnown RBP6.07□□□□□ -1.44
SPG11-207ENST00000558138 TM2D2Q9BX73 214 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 TMEM191AQ9H0A3 160 aa6.07□□□□□ -1.44
SPG11-207ENST00000558138 IGKV2D-24A0A075B6R9 120 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 SMIM27A0A1W2PRY6 76 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 APCSP02743 223 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 PMCHP20382 165 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 LAGE3Q14657 143 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 AMN1Q8IY45 258 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 FRZBQ92765 325 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 UBE2WQ96B02 151 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 TMEM243Q9BU79 118 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 CHCHD7Q9BUK0 85 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 ST20Q9HBF5 79 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 FRAS1Q86XX4 4008 aa6.06□□□□□ -1.44
SPG11-207ENST00000558138 A0A1B0GVY2 172 aa6.05□□□□□ -1.44
SPG11-207ENST00000558138 A0A1B0GW15 77 aa6.05□□□□□ -1.44
SPG11-207ENST00000558138 NCR2O95944 276 aa6.05□□□□□ -1.44
SPG11-207ENST00000558138 HBBP68871 147 aa6.05□□□□□ -1.44
SPG11-207ENST00000558138 MPV17L2Q567V2 206 aa6.05□□□□□ -1.44
SPG11-207ENST00000558138 AMMECR1LQ6DCA0 310 aa6.05□□□□□ -1.44
SPG11-207ENST00000558138 CLPSL2Q6UWE3 100 aa6.05□□□□□ -1.44
SPG11-207ENST00000558138 ANAPC16Q96DE5 110 aa6.05□□□□□ -1.44
SPG11-207ENST00000558138 MRAP2Q96G30 205 aa6.05□□□□□ -1.44
SPG11-207ENST00000558138 SDHAF1A6NFY7 115 aa6.04□□□□□ -1.44
SPG11-207ENST00000558138 SMKR1H3BMG3 65 aa6.04□□□□□ -1.44
SPG11-207ENST00000558138 PPP1R17O96001 155 aa6.04□□□□□ -1.44
SPG11-207ENST00000558138 RAB4AP20338 218 aa6.04□□□□□ -1.44
SPG11-207ENST00000558138 Q0VG73 95 aa6.04□□□□□ -1.44
SPG11-207ENST00000558138 IQCJQ1A5X6 159 aa6.04□□□□□ -1.44
SPG11-207ENST00000558138 ATRAIDQ6UW56 229 aa6.04□□□□□ -1.44
SPG11-207ENST00000558138 Q6ZRN7 208 aaPredicted RBP6.04□□□□□ -1.44
SPG11-207ENST00000558138 NTM-AS1Q6ZSK4 140 aa6.04□□□□□ -1.44
SPG11-207ENST00000558138 COX11Q9Y6N1 276 aa6.04□□□□□ -1.44
SPG11-207ENST00000558138 TMEM218A2RU14 115 aa6.03□□□□□ -1.44
SPG11-207ENST00000558138 I3L3M4 83 aa6.03□□□□□ -1.44
SPG11-207ENST00000558138 FCER1GP30273 86 aa6.03□□□□□ -1.44
SPG11-207ENST00000558138 CKS2P33552 79 aa6.03□□□□□ -1.44
SPG11-207ENST00000558138 RNASEKQ6P5S7 137 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms