RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 HTN3P15516 51 aa11.9□□□□□ -0.5
SNX1-203ENST00000558040 SLC25A29Q8N8R3 303 aa11.9□□□□□ -0.5
SNX1-203ENST00000558040 C18orf32Q8TCD1 76 aa11.9□□□□□ -0.5
SNX1-203ENST00000558040 ST20Q9HBF5 79 aa11.9□□□□□ -0.5
SNX1-203ENST00000558040 PRO0255Q9UI72 69 aa11.9□□□□□ -0.5
SNX1-203ENST00000558040 TRBV6-5A0A0K0K1A5 114 aa11.89□□□□□ -0.51
SNX1-203ENST00000558040 HOXA5P20719 270 aa11.89□□□□□ -0.51
SNX1-203ENST00000558040 NANOS2P60321 138 aaKnown RBP11.89□□□□□ -0.51
SNX1-203ENST00000558040 SUMO2P61956 95 aaKnown RBP11.89□□□□□ -0.51
SNX1-203ENST00000558040 Q0VG73 95 aa11.89□□□□□ -0.51
SNX1-203ENST00000558040 Q6ZTC4 211 aa11.89□□□□□ -0.51
SNX1-203ENST00000558040 TNFRSF18Q9Y5U5 241 aa11.89□□□□□ -0.51
SNX1-203ENST00000558040 CRYBA4P53673 196 aa11.88□□□□□ -0.51
SNX1-203ENST00000558040 RPL36AP83881 106 aaKnown RBP11.88□□□□□ -0.51
SNX1-203ENST00000558040 BAGE3Q86Y29 109 aa11.88□□□□□ -0.51
SNX1-203ENST00000558040 RPL36ALQ969Q0 106 aaKnown RBP11.88□□□□□ -0.51
SNX1-203ENST00000558040 PRSS47A8MTI9 375 aa11.87□□□□□ -0.51
SNX1-203ENST00000558040 PAX4O43316 350 aa11.87□□□□□ -0.51
SNX1-203ENST00000558040 P0DMU3 169 aa11.87□□□□□ -0.51
SNX1-203ENST00000558040 FAM231AP0DMU4 169 aa11.87□□□□□ -0.51
SNX1-203ENST00000558040 FAM231CP0DMU5 169 aa11.87□□□□□ -0.51
SNX1-203ENST00000558040 PMCHP20382 165 aa11.87□□□□□ -0.51
SNX1-203ENST00000558040 NEXN-AS1Q8NBZ9 246 aa11.87□□□□□ -0.51
SNX1-203ENST00000558040 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
SNX1-203ENST00000558040 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
SNX1-203ENST00000558040 TMA7Q9Y2S6 64 aaKnown RBP11.87□□□□□ -0.51
SNX1-203ENST00000558040 TRBV7-3A0A075B6L6 115 aa11.86□□□□□ -0.51
SNX1-203ENST00000558040 LOC389332A0A1B0GUA5 103 aa11.86□□□□□ -0.51
SNX1-203ENST00000558040 S100A6P06703 90 aa11.86□□□□□ -0.51
SNX1-203ENST00000558040 RPL32P62910 135 aaKnown RBP11.86□□□□□ -0.51
SNX1-203ENST00000558040 IQCJQ1A5X6 159 aa11.86□□□□□ -0.51
SNX1-203ENST00000558040 SMIM2Q9BVW6 85 aa11.86□□□□□ -0.51
SNX1-203ENST00000558040 DEFB131BA0A096LNP1 70 aa11.85□□□□□ -0.51
SNX1-203ENST00000558040 TRAV10A0A0B4J240 114 aa11.85□□□□□ -0.51
SNX1-203ENST00000558040 SDHAF1A6NFY7 115 aa11.85□□□□□ -0.51
SNX1-203ENST00000558040 NDUFA6P56556 154 aa11.85□□□□□ -0.51
SNX1-203ENST00000558040 TMEM70Q9BUB7 260 aa11.85□□□□□ -0.51
SNX1-203ENST00000558040 GAGE12JA6NER3 117 aa11.84□□□□□ -0.51
SNX1-203ENST00000558040 VCYO14598 125 aa11.84□□□□□ -0.51
SNX1-203ENST00000558040 GAGE1Q13065 139 aa11.84□□□□□ -0.51
SNX1-203ENST00000558040 GAGE4Q13068 117 aa11.84□□□□□ -0.51
SNX1-203ENST00000558040 GAGE5Q13069 117 aa11.84□□□□□ -0.51
SNX1-203ENST00000558040 GAGE13Q4V321 117 aa11.84□□□□□ -0.51
SNX1-203ENST00000558040 FA2HQ7L5A8 372 aa11.84□□□□□ -0.51
SNX1-203ENST00000558040 Q8N8P6 123 aa11.84□□□□□ -0.51
SNX1-203ENST00000558040 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
SNX1-203ENST00000558040 TRAV26-1A0A087WT03 109 aa11.83□□□□□ -0.52
SNX1-203ENST00000558040 GYPEP15421 78 aa11.83□□□□□ -0.52
SNX1-203ENST00000558040 IFI27P40305 119 aaPredicted RBP11.83□□□□□ -0.52
SNX1-203ENST00000558040 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
SNX1-203ENST00000558040 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
SNX1-203ENST00000558040 A0A0J9YY99 117 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 TRBV27A0A0K0K1C4 114 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 LOC100131303A0A0U1RQF7 123 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 H3BNG1 76 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 I3L3M4 83 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 K7EMI3 77 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 TCAPO15273 167 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 LINC00614P0C842 121 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 COA6Q5JTJ3 125 aaKnown RBP11.82□□□□□ -0.52
SNX1-203ENST00000558040 RNASEKQ6P5S7 137 aaKnown RBP11.82□□□□□ -0.52
SNX1-203ENST00000558040 DAZ4Q86SG3 579 aaKnown RBP11.82□□□□□ -0.52
SNX1-203ENST00000558040 NIT1Q86X76 327 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 CHCHD1Q96BP2 118 aaKnown RBP11.82□□□□□ -0.52
SNX1-203ENST00000558040 VSIG2Q96IQ7 327 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 DAZ3Q9NR90 486 aaKnown RBP11.82□□□□□ -0.52
SNX1-203ENST00000558040 Q9UF83 564 aa11.82□□□□□ -0.52
SNX1-203ENST00000558040 SERF1AO75920 110 aa11.81□□□□□ -0.52
SNX1-203ENST00000558040 UBE2D3P61077 147 aa11.81□□□□□ -0.52
SNX1-203ENST00000558040 UBE2D2P62837 147 aa11.81□□□□□ -0.52
SNX1-203ENST00000558040 AP5S1Q9NUS5 200 aa11.81□□□□□ -0.52
SNX1-203ENST00000558040 ICOSQ9Y6W8 199 aa11.81□□□□□ -0.52
SNX1-203ENST00000558040 TENM3Q9P273 2699 aa11.8□□□□□ -0.52
SNX1-203ENST00000558040 IGLV2-18A0A075B6J9 118 aa11.8□□□□□ -0.52
SNX1-203ENST00000558040 LINC00694P0DN24 101 aa11.8□□□□□ -0.52
SNX1-203ENST00000558040 MRPL23Q16540 153 aaKnown RBP11.8□□□□□ -0.52
SNX1-203ENST00000558040 SH2D6Q7Z4S9 175 aa11.8□□□□□ -0.52
SNX1-203ENST00000558040 LINC01546A6NGU7 62 aa11.79□□□□□ -0.52
SNX1-203ENST00000558040 HSBP1O75506 76 aa11.79□□□□□ -0.52
SNX1-203ENST00000558040 FCER1GP30273 86 aa11.79□□□□□ -0.52
SNX1-203ENST00000558040 NEGR1Q7Z3B1 354 aa11.79□□□□□ -0.52
SNX1-203ENST00000558040 MEGF8Q7Z7M0 2845 aa11.79□□□□□ -0.52
SNX1-203ENST00000558040 HUWE1Q7Z6Z7 4374 aaKnown RBP11.79□□□□□ -0.52
SNX1-203ENST00000558040 COTL1Q14019 142 aa11.78□□□□□ -0.52
SNX1-203ENST00000558040 LAGE3Q14657 143 aa11.78□□□□□ -0.52
SNX1-203ENST00000558040 ORMDL2Q53FV1 153 aa11.78□□□□□ -0.52
SNX1-203ENST00000558040 ATP6V0E2Q8NHE4 81 aa11.78□□□□□ -0.52
SNX1-203ENST00000558040 PHLDA1Q8WV24 401 aaPredicted RBP11.78□□□□□ -0.52
SNX1-203ENST00000558040 URB1-AS1Q96HZ7 61 aa11.78□□□□□ -0.52
SNX1-203ENST00000558040 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.53
SNX1-203ENST00000558040 TMEM97Q5BJF2 176 aa11.77□□□□□ -0.53
SNX1-203ENST00000558040 TSHBP01222 138 aa11.76□□□□□ -0.53
SNX1-203ENST00000558040 ESDP10768 282 aa11.76□□□□□ -0.53
SNX1-203ENST00000558040 G0S2P27469 103 aa11.76□□□□□ -0.53
SNX1-203ENST00000558040 LINC00310P59036 64 aa11.76□□□□□ -0.53
SNX1-203ENST00000558040 C15orf53Q8NAA6 179 aa11.76□□□□□ -0.53
SNX1-203ENST00000558040 DNAH9Q9NYC9 4486 aa11.76□□□□□ -0.53
SNX1-203ENST00000558040 SNRPEP62304 92 aaKnown RBP11.75□□□□□ -0.53
SNX1-203ENST00000558040 GTSF1LQ9H1H1 148 aa11.75□□□□□ -0.53
SNX1-203ENST00000558040 A0A096LPF7 62 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms