RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 COL4A2P08572 1712 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 IGLV3-16A0A075B6K0 115 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 FAM223BA6NKX1 122 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 CGB3P0DN86 165 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 CGB7P0DN87 165 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF22P17026 224 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-212ENST00000557538 GCHFRP30047 84 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 DEFB116Q30KQ4 102 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF826PQ6ZT77 177 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 LINC00173Q6ZV60 143 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 LINC01560Q8TB33 94 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 CHCHD1Q96BP2 118 aaKnown RBP0.99□□□□□ -2.25
HIF1A-212ENST00000557538 UBE2D4Q9Y2X8 147 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF462Q96JM2 2506 aa0.99□□□□□ -2.25
HIF1A-212ENST00000557538 ABCA2Q9BZC7 2435 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 OBSCNQ5VST9 7968 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 MYMXA0A1B0GTQ4 84 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 SMIM27A0A1W2PRY6 76 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 A6NDX4 124 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 NPYP01303 97 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 HLA-DPB1P04440 258 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 IL9P15248 144 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 XCL1P47992 114 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 PSMG4Q5JS54 123 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 HMGN2P46Q86SG4 172 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 LYPD6Q86Y78 171 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 PDPNQ86YL7 162 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 Q8N9W7 124 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 IFI27L1Q96BM0 104 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 OBSCN-AS1Q96MR7 158 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 V9GYV3 84 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 DMDP11532 3685 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 IGKV1-6A0A0C4DH72 117 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 TRBV7-4A0A0J9YYF1 115 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 TEX49A0A1B0GTD5 131 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 hDV103S1A0JD37 113 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 UBE2L6O14933 153 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 IFI6P09912 130 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 FAUP35544 74 aaKnown RBP0.98□□□□□ -2.25
HIF1A-212ENST00000557538 KRTAP10-10P60014 251 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 UBE2BP63146 152 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF816Q0VGE8 651 aaPredicted RBP0.98□□□□□ -2.25
HIF1A-212ENST00000557538 ADM2Q7Z4H4 148 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 FAM19A2Q8N3H0 131 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 ZFAND2AQ8N6M9 145 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 NABP2Q9BQ15 211 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 PLA2G12AQ9BZM1 189 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 NXT2Q9NPJ8 142 aaKnown RBP0.98□□□□□ -2.25
HIF1A-212ENST00000557538 IL36BQ9NZH7 164 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 NINQ8N4C6 2090 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 NBPF19A0A087WUL8 3843 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 USP34Q70CQ2 3546 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 IGHV1-45A0A0A0MS14 117 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 IGHV1-69DA0A0B4J2H0 117 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 LCE6AA0A183 80 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 A0A1B0GW54 56 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 IGKV1-39P01597 117 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 IGKV1D-39P04432 117 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 PRM2P04554 102 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 RPL30P62888 115 aaKnown RBP0.98□□□□□ -2.25
HIF1A-212ENST00000557538 SLC48A1Q6P1K1 146 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 CAMK2N2Q96S95 79 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 SLC25A2Q9BXI2 301 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 CKLFQ9UBR5 152 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 THADAQ6YHU6 1953 aa0.98□□□□□ -2.25
HIF1A-212ENST00000557538 TRBV25-1A0A075B6N4 114 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 IGKV2D-26A0A0A0MRZ7 120 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 TRBV10-2A0A0K0K1G8 114 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 A6NIN4 97 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 SLC25A20O43772 301 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 IGHV3-30-3P0DP02 117 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 ESRGQ1W209 222 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 LINC00269Q8N2A0 174 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 COPS9Q8WXC6 57 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 FAM167A-AS1Q96KT0 104 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 MGST2Q99735 147 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 FAM103A1Q9BTL3 118 aaKnown RBP0.97□□□□□ -2.25
HIF1A-212ENST00000557538 EPDR1Q9UM22 224 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF706Q9Y5V0 76 aaPredicted RBP0.97□□□□□ -2.25
HIF1A-212ENST00000557538 ATG2BQ96BY7 2078 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 AKAP9Q99996 3911 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 SHROOM3Q8TF72 1996 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 DSCAMO60469 2012 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 TRPM6Q9BX84 2022 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 BAZ2BQ9UIF8 2168 aaKnown RBP0.97□□□□□ -2.25
HIF1A-212ENST00000557538 NCOA6Q14686 2063 aaPredicted RBP0.97□□□□□ -2.25
HIF1A-212ENST00000557538 IGHV3-72A0A0B4J1Y9 119 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 TRAV3A0A0B4J244 114 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 TRAV22A0A0B4J277 110 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 C11orf94C9JXX5 98 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 NDUFC1O43677 76 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 ERC2-IT1O76042 136 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 LHBP01229 141 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 CLPSP04118 112 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 SCGB1C2P0DMR2 95 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 CCL3P10147 92 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 MIFP14174 115 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 ROMO1P60602 79 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 BLCAPP62952 87 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF117Q03924 483 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms