RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TRAV4A0A0B4J268 109 aa8.97□□□□□ -0.97
SHMT2-233ENST00000557529 TRBV27A0A0K0K1C4 114 aa8.97□□□□□ -0.97
SHMT2-233ENST00000557529 CIDEAO60543 219 aa8.97□□□□□ -0.97
SHMT2-233ENST00000557529 NUDT3O95989 172 aa8.97□□□□□ -0.97
SHMT2-233ENST00000557529 IGHV3-53P01767 116 aa8.97□□□□□ -0.97
SHMT2-233ENST00000557529 TEX43Q6ZNM6 134 aa8.97□□□□□ -0.97
SHMT2-233ENST00000557529 Q6ZTI0 123 aa8.97□□□□□ -0.97
SHMT2-233ENST00000557529 FBN1P35555 2871 aaKnown RBP8.96□□□□□ -0.97
SHMT2-233ENST00000557529 LINC01549A6NIU2 74 aa8.96□□□□□ -0.98
SHMT2-233ENST00000557529 ATP5LO75964 103 aa8.96□□□□□ -0.98
SHMT2-233ENST00000557529 IGHV4-30-4P0DP06 118 aa8.96□□□□□ -0.98
SHMT2-233ENST00000557529 SPATA12Q7Z6I5 190 aa8.96□□□□□ -0.98
SHMT2-233ENST00000557529 IFI27L1Q96BM0 104 aa8.96□□□□□ -0.98
SHMT2-233ENST00000557529 DNAJC30Q96LL9 226 aa8.96□□□□□ -0.98
SHMT2-233ENST00000557529 TNFRSF18Q9Y5U5 241 aa8.95□□□□□ -0.98
SHMT2-233ENST00000557529 X6R8D5 127 aa8.95□□□□□ -0.98
SHMT2-233ENST00000557529 STAB1Q9NY15 2570 aa8.94□□□□□ -0.98
SHMT2-233ENST00000557529 TRGV2A0A075B6R0 118 aa8.94□□□□□ -0.98
SHMT2-233ENST00000557529 A8MZ25 164 aa8.94□□□□□ -0.98
SHMT2-233ENST00000557529 KRTAP10-11P60412 298 aa8.94□□□□□ -0.98
SHMT2-233ENST00000557529 GAGE12BA1L429 117 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 I3L3M4 83 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 GAGE7O76087 117 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 GAGE12FP0CL80 117 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 GAGE12GP0CL81 117 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 GAGE12IP0CL82 117 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 PKIAP61925 76 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 RHOHQ15669 191 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 DEFB135Q30KP9 77 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 LINC01545Q5VT33 79 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 Q6ZSN1 163 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 NEGR1Q7Z3B1 354 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 TOMM6Q96B49 74 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 ZNF479Q96JC4 524 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 VAMP8Q9BV40 100 aa8.93□□□□□ -0.98
SHMT2-233ENST00000557529 TRBV10-1A0A0K0K1A3 114 aa8.92□□□□□ -0.98
SHMT2-233ENST00000557529 PCP4L1A6NKN8 68 aa8.92□□□□□ -0.98
SHMT2-233ENST00000557529 TSTD3H0UI37 97 aa8.92□□□□□ -0.98
SHMT2-233ENST00000557529 C2orf66Q6UXQ4 117 aa8.92□□□□□ -0.98
SHMT2-233ENST00000557529 CYSLTR1Q9Y271 337 aa8.92□□□□□ -0.98
SHMT2-233ENST00000557529 LYRM9A8MSI8 78 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 H0Y8G0 127 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-233ENST00000557529 P0DMU3 169 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 FAM231AP0DMU4 169 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 FAM231CP0DMU5 169 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 MIFP14174 115 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 EMP1P54849 157 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 RIPPLY3P57055 190 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 LGALS9CQ6DKI2 356 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 ZNF664Q8N3J9 261 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 LINC00612Q8N6U2 182 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 NEXN-AS1Q8NBZ9 246 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 OR11H2Q8NH07 326 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 RNF183Q96D59 192 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 C18orf15Q96N68 181 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 SCGB3A1Q96QR1 104 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 COL6A5A8TX70 2615 aa8.91□□□□□ -0.98
SHMT2-233ENST00000557529 K7EQD1 137 aa8.9□□□□□ -0.98
SHMT2-233ENST00000557529 TSHBP01222 138 aa8.9□□□□□ -0.98
SHMT2-233ENST00000557529 SAMD5Q5TGI4 173 aa8.9□□□□□ -0.98
SHMT2-233ENST00000557529 NACAE9PAV3 2078 aa8.9□□□□□ -0.98
SHMT2-233ENST00000557529 TRAV9-2A0A087WT02 112 aa8.89□□□□□ -0.99
SHMT2-233ENST00000557529 PRSS1P07477 247 aa8.89□□□□□ -0.99
SHMT2-233ENST00000557529 Q6ZN92 141 aa8.89□□□□□ -0.99
SHMT2-233ENST00000557529 ERASQ7Z444 233 aa8.89□□□□□ -0.99
SHMT2-233ENST00000557529 TRGV4A0A0C4DH28 118 aa8.88□□□□□ -0.99
SHMT2-233ENST00000557529 IGHV4-28A0A0C4DH34 117 aa8.88□□□□□ -0.99
SHMT2-233ENST00000557529 TRBV6-4A0A1B0GX49 114 aa8.88□□□□□ -0.99
SHMT2-233ENST00000557529 G3V4G9 280 aa8.88□□□□□ -0.99
SHMT2-233ENST00000557529 RPL36AP83881 106 aaKnown RBP8.88□□□□□ -0.99
SHMT2-233ENST00000557529 ATOH7Q8N100 152 aa8.88□□□□□ -0.99
SHMT2-233ENST00000557529 RPL36ALQ969Q0 106 aaKnown RBP8.88□□□□□ -0.99
SHMT2-233ENST00000557529 PRO1933Q9H354 126 aa8.88□□□□□ -0.99
SHMT2-233ENST00000557529 TP53TG1Q9Y2A0 90 aa8.88□□□□□ -0.99
SHMT2-233ENST00000557529 PAM16Q9Y3D7 125 aa8.88□□□□□ -0.99
SHMT2-233ENST00000557529 TRBV7-3A0A075B6L6 115 aa8.87□□□□□ -0.99
SHMT2-233ENST00000557529 HSBP1L1C9JCN9 74 aa8.87□□□□□ -0.99
SHMT2-233ENST00000557529 DEFB130BP0DP73 79 aa8.87□□□□□ -0.99
SHMT2-233ENST00000557529 DEFB130AP0DP74 79 aa8.87□□□□□ -0.99
SHMT2-233ENST00000557529 SLC25A29Q8N8R3 303 aa8.87□□□□□ -0.99
SHMT2-233ENST00000557529 TMEM141Q96I45 108 aa8.87□□□□□ -0.99
SHMT2-233ENST00000557529 TIMM17AQ99595 171 aa8.87□□□□□ -0.99
SHMT2-233ENST00000557529 ZMAT4Q9H898 229 aa8.87□□□□□ -0.99
SHMT2-233ENST00000557529 TRAV12-1A0A0B4J245 112 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 COTL1Q14019 142 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 FHL2Q14192 279 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 ODF1Q14990 250 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 SPATA45Q537H7 98 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 FAM222AQ5U5X8 452 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 DAZ4Q86SG3 579 aaKnown RBP8.86□□□□□ -0.99
SHMT2-233ENST00000557529 Q8NAQ8 132 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 C20orf203Q8NBC4 194 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 ZNRF2Q8NHG8 242 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 PRADC1Q9BSG0 188 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 DAZ3Q9NR90 486 aaKnown RBP8.86□□□□□ -0.99
SHMT2-233ENST00000557529 IGIPA6NJ69 53 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 PMCHL2Q9BQD1 86 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 DKK2Q9UBU2 259 aa8.86□□□□□ -0.99
SHMT2-233ENST00000557529 Q9UF83 564 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms