RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
SLIRP-210ENST00000557431 NEXN-AS1Q8NBZ9 246 aa9.07□□□□□ -0.96
SLIRP-210ENST00000557431 FMC1Q96HJ9 113 aa9.07□□□□□ -0.96
SLIRP-210ENST00000557431 ZFP30Q9Y2G7 519 aa9.07□□□□□ -0.96
SLIRP-210ENST00000557431 TRBV7-3A0A075B6L6 115 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 TRBV6-8A0A0A6YYG3 113 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 TRAV1-1A0A0B4J248 108 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 MUC21A0A0G2JKD1 596 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 MUC21A0A140T8X8 626 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 UBE2G1P62253 170 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 CCL20P78556 96 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 Q0VG73 95 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 ZNF56Q15929 161 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 COX8CQ7Z4L0 72 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 C9orf62Q8N4C0 152 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 CHCHD7Q9BUK0 85 aa9.06□□□□□ -0.96
SLIRP-210ENST00000557431 A0A1B0GVG6 124 aa9.05□□□□□ -0.96
SLIRP-210ENST00000557431 AKR1C3P42330 323 aa9.05□□□□□ -0.96
SLIRP-210ENST00000557431 SSTP61278 116 aa9.05□□□□□ -0.96
SLIRP-210ENST00000557431 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
SLIRP-210ENST00000557431 FAM162BQ5T6X4 162 aa9.05□□□□□ -0.96
SLIRP-210ENST00000557431 ZFP82Q8N141 532 aa9.05□□□□□ -0.96
SLIRP-210ENST00000557431 LTAP01374 205 aa9.04□□□□□ -0.96
SLIRP-210ENST00000557431 S100A9P06702 114 aaKnown RBP9.04□□□□□ -0.96
SLIRP-210ENST00000557431 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
SLIRP-210ENST00000557431 LCE2DQ5TA82 110 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-210ENST00000557431 OR10AG1Q8NH19 301 aa9.04□□□□□ -0.96
SLIRP-210ENST00000557431 CHCHD5Q9BSY4 110 aa9.04□□□□□ -0.96
SLIRP-210ENST00000557431 TRBV10-1A0A0K0K1A3 114 aa9.03□□□□□ -0.96
SLIRP-210ENST00000557431 SCO2A0A1W2PP80 73 aa9.03□□□□□ -0.96
SLIRP-210ENST00000557431 TEX46H3BTG2 121 aa9.03□□□□□ -0.96
SLIRP-210ENST00000557431 GAGE6Q13070 117 aa9.03□□□□□ -0.96
SLIRP-210ENST00000557431 ZNF674Q2M3X9 581 aa9.03□□□□□ -0.96
SLIRP-210ENST00000557431 NTM-AS1Q6ZSK4 140 aa9.03□□□□□ -0.96
SLIRP-210ENST00000557431 OR10G8Q8NGN5 311 aa9.03□□□□□ -0.96
SLIRP-210ENST00000557431 MANBALQ9NQG1 85 aa9.03□□□□□ -0.96
SLIRP-210ENST00000557431 GNG13Q9P2W3 67 aa9.03□□□□□ -0.96
SLIRP-210ENST00000557431 IGLV10-54A0A075B6I4 117 aa9.02□□□□□ -0.97
SLIRP-210ENST00000557431 KRTAP26-1Q6PEX3 210 aa9.02□□□□□ -0.97
SLIRP-210ENST00000557431 C9orf163Q8N9P6 203 aa9.02□□□□□ -0.97
SLIRP-210ENST00000557431 TNXBP22105 4242 aa9.01□□□□□ -0.97
SLIRP-210ENST00000557431 CHTF8P0CG12 524 aa9.01□□□□□ -0.97
SLIRP-210ENST00000557431 ODF1Q14990 250 aa9.01□□□□□ -0.97
SLIRP-210ENST00000557431 MLST8Q9BVC4 326 aa9.01□□□□□ -0.97
SLIRP-210ENST00000557431 RAB4BP61018 213 aa9□□□□□ -0.97
SLIRP-210ENST00000557431 RBX1P62877 108 aa9□□□□□ -0.97
SLIRP-210ENST00000557431 PRR27Q6MZM9 219 aa9□□□□□ -0.97
SLIRP-210ENST00000557431 BAGE2Q86Y30 109 aa9□□□□□ -0.97
SLIRP-210ENST00000557431 LINC00269Q8N2A0 174 aa9□□□□□ -0.97
SLIRP-210ENST00000557431 C11orf52Q96A22 123 aa9□□□□□ -0.97
SLIRP-210ENST00000557431 F5H697 171 aa8.99□□□□□ -0.97
SLIRP-210ENST00000557431 MIAQ16674 131 aa8.99□□□□□ -0.97
SLIRP-210ENST00000557431 SDIM1Q6ZPB5 146 aa8.99□□□□□ -0.97
SLIRP-210ENST00000557431 IFNA1P01562 189 aa8.98□□□□□ -0.97
SLIRP-210ENST00000557431 RPL35P42766 123 aaKnown RBP8.98□□□□□ -0.97
SLIRP-210ENST00000557431 NKX2-5P52952 324 aaPredicted RBP8.98□□□□□ -0.97
SLIRP-210ENST00000557431 MEF2BQ02080 365 aaPredicted RBP8.98□□□□□ -0.97
SLIRP-210ENST00000557431 DGAT2L7PQ6IED9 249 aa8.98□□□□□ -0.97
SLIRP-210ENST00000557431 ALKAL2Q6UX46 152 aa8.98□□□□□ -0.97
SLIRP-210ENST00000557431 DERL1Q9BUN8 251 aa8.98□□□□□ -0.97
SLIRP-210ENST00000557431 BCL2P10415 239 aa8.97□□□□□ -0.97
SLIRP-210ENST00000557431 GFRA4Q9GZZ7 299 aa8.97□□□□□ -0.97
SLIRP-210ENST00000557431 PRR34Q9NV39 138 aa8.97□□□□□ -0.97
SLIRP-210ENST00000557431 PDE6DO43924 150 aa8.96□□□□□ -0.98
SLIRP-210ENST00000557431 SLPIP03973 132 aa8.96□□□□□ -0.98
SLIRP-210ENST00000557431 BLOC1S1P78537 153 aa8.96□□□□□ -0.98
SLIRP-210ENST00000557431 SPANXN1Q5VSR9 72 aa8.96□□□□□ -0.98
SLIRP-210ENST00000557431 VAX2Q9UIW0 290 aa8.96□□□□□ -0.98
SLIRP-210ENST00000557431 A0A087WYN8 130 aa8.95□□□□□ -0.98
SLIRP-210ENST00000557431 hDV102S1A0JD36 115 aa8.95□□□□□ -0.98
SLIRP-210ENST00000557431 SNAI2O43623 268 aa8.95□□□□□ -0.98
SLIRP-210ENST00000557431 MGPP08493 103 aa8.95□□□□□ -0.98
SLIRP-210ENST00000557431 TAGLN2P37802 199 aaKnown RBP8.95□□□□□ -0.98
SLIRP-210ENST00000557431 REG3AQ06141 175 aa8.95□□□□□ -0.98
SLIRP-210ENST00000557431 KIF25-AS1Q9Y6Z4 181 aa8.95□□□□□ -0.98
SLIRP-210ENST00000557431 IGLV4-60A0A075B6I1 120 aa8.94□□□□□ -0.98
SLIRP-210ENST00000557431 TRBV25-1A0A075B6N4 114 aa8.94□□□□□ -0.98
SLIRP-210ENST00000557431 RAB19A4D1S5 217 aa8.94□□□□□ -0.98
SLIRP-210ENST00000557431 CXCL1P09341 107 aa8.94□□□□□ -0.98
SLIRP-210ENST00000557431 GZMBP10144 247 aa8.94□□□□□ -0.98
SLIRP-210ENST00000557431 CENPWQ5EE01 88 aa8.94□□□□□ -0.98
SLIRP-210ENST00000557431 C20orf203Q8NBC4 194 aa8.94□□□□□ -0.98
SLIRP-210ENST00000557431 LYPD6BQ8NI32 183 aa8.94□□□□□ -0.98
SLIRP-210ENST00000557431 DPH3Q96FX2 82 aa8.94□□□□□ -0.98
SLIRP-210ENST00000557431 MED9Q9NWA0 146 aa8.94□□□□□ -0.98
SLIRP-210ENST00000557431 CIRBPQ14011 172 aaKnown RBP8.93□□□□□ -0.98
SLIRP-210ENST00000557431 Q6ZRU5 148 aa8.93□□□□□ -0.98
SLIRP-210ENST00000557431 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.93□□□□□ -0.98
SLIRP-210ENST00000557431 SMIM12Q96EX1 92 aa8.93□□□□□ -0.98
SLIRP-210ENST00000557431 SSBP4Q9BWG4 385 aaPredicted RBP8.93□□□□□ -0.98
SLIRP-210ENST00000557431 LRP2P98164 4655 aa8.93□□□□□ -0.98
SLIRP-210ENST00000557431 TRBV20OR9-2A0A075B6H5 130 aa8.92□□□□□ -0.98
SLIRP-210ENST00000557431 PHOX2AO14813 284 aa8.92□□□□□ -0.98
SLIRP-210ENST00000557431 GNG4P50150 75 aa8.92□□□□□ -0.98
SLIRP-210ENST00000557431 PKIAP61925 76 aa8.92□□□□□ -0.98
SLIRP-210ENST00000557431 IGHV1-24A0A0C4DH33 117 aa8.91□□□□□ -0.98
SLIRP-210ENST00000557431 OR5AL1P0C617 328 aa8.91□□□□□ -0.98
SLIRP-210ENST00000557431 SMIM17P0DL12 118 aa8.91□□□□□ -0.98
SLIRP-210ENST00000557431 CNBPP62633 177 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms