RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PPDPFLQ8WWR9 84 aa8.45□□□□□ -1.06
SRP54-213ENST00000556994 A0A0J9YXV3 536 aa8.44□□□□□ -1.06
SRP54-213ENST00000556994 ADARB2-AS1A8MUL3 147 aa8.44□□□□□ -1.06
SRP54-213ENST00000556994 H3BUA1 57 aa8.44□□□□□ -1.06
SRP54-213ENST00000556994 IGLV1-40P01703 118 aa8.44□□□□□ -1.06
SRP54-213ENST00000556994 CRYBA4P53673 196 aa8.44□□□□□ -1.06
SRP54-213ENST00000556994 Q5PR19 223 aa8.44□□□□□ -1.06
SRP54-213ENST00000556994 MUSTN1Q8IVN3 82 aa8.44□□□□□ -1.06
SRP54-213ENST00000556994 ITPR1Q14643 2758 aa8.44□□□□□ -1.06
SRP54-213ENST00000556994 TRBV20-1A0A075B6N2 111 aa8.43□□□□□ -1.06
SRP54-213ENST00000556994 IGHV3-73A0A0B4J1V6 119 aa8.43□□□□□ -1.06
SRP54-213ENST00000556994 TMEM223A0PJW6 202 aa8.43□□□□□ -1.06
SRP54-213ENST00000556994 TCTEX1D4Q5JR98 221 aa8.43□□□□□ -1.06
SRP54-213ENST00000556994 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
SRP54-213ENST00000556994 CUBNO60494 3623 aa8.43□□□□□ -1.06
SRP54-213ENST00000556994 TRBV6-5A0A0K0K1A5 114 aa8.43□□□□□ -1.06
SRP54-213ENST00000556994 HTN1P15515 57 aa8.43□□□□□ -1.06
SRP54-213ENST00000556994 CLUHP3Q96NS8 147 aa8.43□□□□□ -1.06
SRP54-213ENST00000556994 GEMIN7Q9H840 131 aaKnown RBP8.43□□□□□ -1.06
SRP54-213ENST00000556994 C9JAW5 83 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 LEPROTO15243 131 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 ELANEP08246 267 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
SRP54-213ENST00000556994 UCNP55089 124 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 SPXQ9BT56 116 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 CREBBPQ92793 2442 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 TRAV26-1A0A087WT03 109 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 RHODO00212 210 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 BRI3O95415 125 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 IGHV3-33P01772 117 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 RNASE13Q5GAN3 156 aaKnown RBP8.42□□□□□ -1.06
SRP54-213ENST00000556994 TMEM263Q8WUH6 116 aaKnown RBP8.42□□□□□ -1.06
SRP54-213ENST00000556994 DUX5Q96PT3 197 aa8.42□□□□□ -1.06
SRP54-213ENST00000556994 BEX4Q9NWD9 120 aaPredicted RBP8.42□□□□□ -1.06
SRP54-213ENST00000556994 IGHV1OR15-1A0A075B7D0 117 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 A0A0J9YX75 114 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 SLC25A20O43772 301 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 AVPP01185 164 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 CEMP1Q6PRD7 247 aaPredicted RBP8.41□□□□□ -1.06
SRP54-213ENST00000556994 SBSPONQ8IVN8 264 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 C20orf203Q8NBC4 194 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 PIMREGQ9BSJ6 248 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 K7EMT4 169 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 PRM2P04554 102 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 PROK1P58294 105 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 NSUN5P1Q3KNT7 163 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 VCX2Q9H322 139 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 ERG28Q9UKR5 140 aa8.41□□□□□ -1.06
SRP54-213ENST00000556994 IGHV4-30-2A0A087WSY4 118 aa8.4□□□□□ -1.06
SRP54-213ENST00000556994 CFHR3Q02985 330 aa8.4□□□□□ -1.06
SRP54-213ENST00000556994 Q1RN00 199 aa8.4□□□□□ -1.06
SRP54-213ENST00000556994 UTP20O75691 2785 aaKnown RBP8.4□□□□□ -1.07
SRP54-213ENST00000556994 TRAV8-3A0A0A6YYJ7 113 aa8.4□□□□□ -1.07
SRP54-213ENST00000556994 I3L3M4 83 aa8.4□□□□□ -1.07
SRP54-213ENST00000556994 RHOHQ15669 191 aa8.4□□□□□ -1.07
SRP54-213ENST00000556994 PRRC2AP48634 2157 aaKnown RBP8.39□□□□□ -1.07
SRP54-213ENST00000556994 GNLYP22749 145 aa8.39□□□□□ -1.07
SRP54-213ENST00000556994 SNRPD3P62318 126 aaKnown RBP8.39□□□□□ -1.07
SRP54-213ENST00000556994 Q9UF83 564 aa8.39□□□□□ -1.07
SRP54-213ENST00000556994 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
SRP54-213ENST00000556994 A8MZ25 164 aa8.38□□□□□ -1.07
SRP54-213ENST00000556994 PRSS2P07478 247 aa8.38□□□□□ -1.07
SRP54-213ENST00000556994 SYNJ2BPP57105 145 aa8.38□□□□□ -1.07
SRP54-213ENST00000556994 NPC2P61916 151 aa8.38□□□□□ -1.07
SRP54-213ENST00000556994 C10orf105Q8TEF2 133 aa8.38□□□□□ -1.07
SRP54-213ENST00000556994 ZANQ9Y493 2812 aa8.38□□□□□ -1.07
SRP54-213ENST00000556994 IGHV3-30-3P0DP02 117 aa8.38□□□□□ -1.07
SRP54-213ENST00000556994 PSMB8P28062 276 aa8.38□□□□□ -1.07
SRP54-213ENST00000556994 KNCNA6PVL3 124 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 K7EQG2 157 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 IGHV4-59P01825 116 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 CD28P10747 220 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 FAM104AQ969W3 186 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 CCL19Q99731 98 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 M0R2P5 195 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 MSMBP08118 114 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 RBMY1A1P0DJD3 496 aaKnown RBP8.37□□□□□ -1.07
SRP54-213ENST00000556994 RBMY1CP0DJD4 496 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 ATP5J2P56134 94 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 RBMY1FQ15415 496 aaKnown RBP8.37□□□□□ -1.07
SRP54-213ENST00000556994 Q6ZSV7 163 aa8.37□□□□□ -1.07
SRP54-213ENST00000556994 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
SRP54-213ENST00000556994 A0A0B4J2C4 111 aa8.36□□□□□ -1.07
SRP54-213ENST00000556994 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
SRP54-213ENST00000556994 RNF183Q96D59 192 aa8.36□□□□□ -1.07
SRP54-213ENST00000556994 TIMM21Q9BVV7 248 aa8.36□□□□□ -1.07
SRP54-213ENST00000556994 CACNA1AO00555 2505 aa8.35□□□□□ -1.07
SRP54-213ENST00000556994 TRIAP1O43715 76 aa8.35□□□□□ -1.07
SRP54-213ENST00000556994 GATA3P23771 443 aa8.35□□□□□ -1.07
SRP54-213ENST00000556994 ODF3Q96PU9 254 aa8.35□□□□□ -1.07
SRP54-213ENST00000556994 FLNCQ14315 2725 aa8.35□□□□□ -1.07
SRP54-213ENST00000556994 TEX49A0A1B0GTD5 131 aa8.35□□□□□ -1.07
SRP54-213ENST00000556994 DEFB112Q30KQ8 113 aa8.35□□□□□ -1.07
SRP54-213ENST00000556994 LINC01620Q4KN68 170 aa8.35□□□□□ -1.07
SRP54-213ENST00000556994 LITAFQ99732 161 aa8.35□□□□□ -1.07
SRP54-213ENST00000556994 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.34□□□□□ -1.07
SRP54-213ENST00000556994 ATXN8Q156A1 80 aa8.34□□□□□ -1.07
SRP54-213ENST00000556994 NACAE9PAV3 2078 aa8.34□□□□□ -1.07
SRP54-213ENST00000556994 TMEM262E9PQX1 116 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms