RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 KRTAP26-1Q6PEX3 210 aa11.76□□□□□ -0.53
VIPAS39-209ENST00000556909 NTM-AS1Q6ZSK4 140 aa11.76□□□□□ -0.53
VIPAS39-209ENST00000556909 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-209ENST00000556909 PRR34Q9NV39 138 aa11.76□□□□□ -0.53
VIPAS39-209ENST00000556909 VAX2Q9UIW0 290 aa11.76□□□□□ -0.53
VIPAS39-209ENST00000556909 G3V3Q6 166 aa11.75□□□□□ -0.53
VIPAS39-209ENST00000556909 SNAI2O43623 268 aa11.75□□□□□ -0.53
VIPAS39-209ENST00000556909 CYTL1Q9NRR1 136 aa11.75□□□□□ -0.53
VIPAS39-209ENST00000556909 MUC21A0A0G2JKD1 596 aa11.74□□□□□ -0.53
VIPAS39-209ENST00000556909 MUC21A0A140T8X8 626 aa11.74□□□□□ -0.53
VIPAS39-209ENST00000556909 PAGE4O60829 102 aa11.74□□□□□ -0.53
VIPAS39-209ENST00000556909 RBX1P62877 108 aa11.74□□□□□ -0.53
VIPAS39-209ENST00000556909 TMEM97Q5BJF2 176 aa11.74□□□□□ -0.53
VIPAS39-209ENST00000556909 SSBP4Q9BWG4 385 aaPredicted RBP11.74□□□□□ -0.53
VIPAS39-209ENST00000556909 F5H697 171 aa11.73□□□□□ -0.53
VIPAS39-209ENST00000556909 OR5AL1P0C617 328 aa11.73□□□□□ -0.53
VIPAS39-209ENST00000556909 GAGE6Q13070 117 aa11.73□□□□□ -0.53
VIPAS39-209ENST00000556909 SPANXN1Q5VSR9 72 aa11.73□□□□□ -0.53
VIPAS39-209ENST00000556909 LINC00269Q8N2A0 174 aa11.73□□□□□ -0.53
VIPAS39-209ENST00000556909 DERL1Q9BUN8 251 aa11.73□□□□□ -0.53
VIPAS39-209ENST00000556909 MLST8Q9BVC4 326 aa11.73□□□□□ -0.53
VIPAS39-209ENST00000556909 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
VIPAS39-209ENST00000556909 SCO2A0A1W2PP80 73 aa11.72□□□□□ -0.53
VIPAS39-209ENST00000556909 S100A9P06702 114 aaKnown RBP11.72□□□□□ -0.53
VIPAS39-209ENST00000556909 KIF25-AS1Q9Y6Z4 181 aa11.72□□□□□ -0.53
VIPAS39-209ENST00000556909 ARPC5O15511 151 aa11.71□□□□□ -0.53
VIPAS39-209ENST00000556909 MT1HL1P0DM35 61 aa11.71□□□□□ -0.53
VIPAS39-209ENST00000556909 SDIM1Q6ZPB5 146 aa11.71□□□□□ -0.53
VIPAS39-209ENST00000556909 SSTP61278 116 aa11.7□□□□□ -0.54
VIPAS39-209ENST00000556909 BAGE2Q86Y30 109 aa11.7□□□□□ -0.54
VIPAS39-209ENST00000556909 AP1S3Q96PC3 154 aa11.7□□□□□ -0.54
VIPAS39-209ENST00000556909 SMIM17P0DL12 118 aa11.69□□□□□ -0.54
VIPAS39-209ENST00000556909 CNBPP62633 177 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-209ENST00000556909 CIRBPQ14011 172 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-209ENST00000556909 IQCJQ1A5X6 159 aa11.69□□□□□ -0.54
VIPAS39-209ENST00000556909 CLRN3Q8NCR9 226 aa11.69□□□□□ -0.54
VIPAS39-209ENST00000556909 IGLV10-54A0A075B6I4 117 aa11.68□□□□□ -0.54
VIPAS39-209ENST00000556909 IGHV1-24A0A0C4DH33 117 aa11.68□□□□□ -0.54
VIPAS39-209ENST00000556909 A0A1B0GV50 99 aa11.68□□□□□ -0.54
VIPAS39-209ENST00000556909 REG3AQ06141 175 aa11.68□□□□□ -0.54
VIPAS39-209ENST00000556909 A0A0D9SG52 128 aa11.67□□□□□ -0.54
VIPAS39-209ENST00000556909 PFDN1O60925 122 aa11.67□□□□□ -0.54
VIPAS39-209ENST00000556909 C20orf203Q8NBC4 194 aa11.67□□□□□ -0.54
VIPAS39-209ENST00000556909 SFT2D1Q8WV19 159 aa11.67□□□□□ -0.54
VIPAS39-209ENST00000556909 MBD3L1Q8WWY6 194 aa11.67□□□□□ -0.54
VIPAS39-209ENST00000556909 hDV102S1A0JD36 115 aa11.66□□□□□ -0.54
VIPAS39-209ENST00000556909 Q6ZRU5 148 aa11.66□□□□□ -0.54
VIPAS39-209ENST00000556909 FAM213BQ8TBF2 198 aa11.66□□□□□ -0.54
VIPAS39-209ENST00000556909 TNXBP22105 4242 aa11.65□□□□□ -0.54
VIPAS39-209ENST00000556909 M0QY20 66 aa11.65□□□□□ -0.54
VIPAS39-209ENST00000556909 MGPP08493 103 aa11.65□□□□□ -0.54
VIPAS39-209ENST00000556909 SUMO4Q6EEV6 95 aa11.64□□□□□ -0.55
VIPAS39-209ENST00000556909 IGLV4-60A0A075B6I1 120 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 IGHV3-64A0A075B6Q5 118 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 TRAV8-4A0A0B4J246 113 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 UMAD1C9J7I0 102 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 SMLR1H3BR10 107 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 H7C1H1 209 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 P01737 135 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 SLPIP03973 132 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 CHTF8P0CG12 524 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 GZMBP10144 247 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 RPL35P42766 123 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 TMUB2Q71RG4 321 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 TPPP3Q9BW30 176 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 GFRA4Q9GZZ7 299 aa11.63□□□□□ -0.55
VIPAS39-209ENST00000556909 IGLC6P0CF74 106 aa11.62□□□□□ -0.55
VIPAS39-209ENST00000556909 KCNRGQ8N5I3 272 aa11.62□□□□□ -0.55
VIPAS39-209ENST00000556909 SPACA4Q8TDM5 124 aa11.62□□□□□ -0.55
VIPAS39-209ENST00000556909 RNF185Q96GF1 192 aa11.62□□□□□ -0.55
VIPAS39-209ENST00000556909 TMEM243Q9BU79 118 aa11.62□□□□□ -0.55
VIPAS39-209ENST00000556909 A0A087WYN8 130 aa11.61□□□□□ -0.55
VIPAS39-209ENST00000556909 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-209ENST00000556909 A0A1B0GUV1 79 aa11.61□□□□□ -0.55
VIPAS39-209ENST00000556909 NKX2-5P52952 324 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-209ENST00000556909 ZNF345Q14585 488 aa11.61□□□□□ -0.55
VIPAS39-209ENST00000556909 FER1L6-AS1Q8NA97 138 aa11.61□□□□□ -0.55
VIPAS39-209ENST00000556909 AP5S1Q9NUS5 200 aa11.61□□□□□ -0.55
VIPAS39-209ENST00000556909 RAB5CP51148 216 aa11.6□□□□□ -0.55
VIPAS39-209ENST00000556909 BATF3Q9NR55 127 aa11.6□□□□□ -0.55
VIPAS39-209ENST00000556909 LRP2P98164 4655 aa11.59□□□□□ -0.55
VIPAS39-209ENST00000556909 H2AFB1P0C5Y9 115 aa11.59□□□□□ -0.55
VIPAS39-209ENST00000556909 CACNG7P62955 275 aa11.59□□□□□ -0.55
VIPAS39-209ENST00000556909 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
VIPAS39-209ENST00000556909 RASL11AQ6T310 242 aa11.59□□□□□ -0.55
VIPAS39-209ENST00000556909 C11orf52Q96A22 123 aa11.59□□□□□ -0.55
VIPAS39-209ENST00000556909 PGLYRP4Q96LB8 373 aa11.59□□□□□ -0.55
VIPAS39-209ENST00000556909 RPS20P60866 119 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-209ENST00000556909 OR2D3Q8NGH3 330 aa11.58□□□□□ -0.56
VIPAS39-209ENST00000556909 DPH3Q96FX2 82 aa11.58□□□□□ -0.56
VIPAS39-209ENST00000556909 PLAC8Q9NZF1 115 aa11.58□□□□□ -0.56
VIPAS39-209ENST00000556909 C19orf71A6NCJ1 209 aa11.57□□□□□ -0.56
VIPAS39-209ENST00000556909 WDR73Q6P4I2 378 aa11.57□□□□□ -0.56
VIPAS39-209ENST00000556909 C15orf56Q8N910 161 aa11.57□□□□□ -0.56
VIPAS39-209ENST00000556909 PHOX2AO14813 284 aa11.56□□□□□ -0.56
VIPAS39-209ENST00000556909 UBE2L6O14933 153 aa11.56□□□□□ -0.56
VIPAS39-209ENST00000556909 BCL2L11O43521 198 aa11.56□□□□□ -0.56
VIPAS39-209ENST00000556909 MANBALQ9NQG1 85 aa11.56□□□□□ -0.56
VIPAS39-209ENST00000556909 GNG13Q9P2W3 67 aa11.56□□□□□ -0.56
VIPAS39-209ENST00000556909 AMTP48728 403 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms