RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 FAM162BQ5T6X4 162 aa3.25□□□□□ -1.89
ATXN3-243ENST00000556671 LGALS9CQ6DKI2 356 aa3.25□□□□□ -1.89
ATXN3-243ENST00000556671 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
ATXN3-243ENST00000556671 C15orf54Q8N8G6 183 aa3.25□□□□□ -1.89
ATXN3-243ENST00000556671 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-243ENST00000556671 C11orf72Q8NBR9 251 aa3.25□□□□□ -1.89
ATXN3-243ENST00000556671 PCNPQ8WW12 178 aaKnown RBP3.25□□□□□ -1.89
ATXN3-243ENST00000556671 ZC2HC1AQ96GY0 325 aa3.25□□□□□ -1.89
ATXN3-243ENST00000556671 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
ATXN3-243ENST00000556671 MANBALQ9NQG1 85 aa3.25□□□□□ -1.89
ATXN3-243ENST00000556671 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
ATXN3-243ENST00000556671 HHLA3Q9XRX5 114 aa3.25□□□□□ -1.89
ATXN3-243ENST00000556671 HUWE1Q7Z6Z7 4374 aaKnown RBP3.24□□□□□ -1.89
ATXN3-243ENST00000556671 RBFOX3A6NFN3 312 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 H3BVH4 76 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 NDUFS6O75380 124 aaKnown RBP3.24□□□□□ -1.89
ATXN3-243ENST00000556671 MT-ND4LP03901 98 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 ARMS2P0C7Q2 107 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 RPL35P42766 123 aaKnown RBP3.24□□□□□ -1.89
ATXN3-243ENST00000556671 GNG4P50150 75 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 RAB5BP61020 215 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 CTAG1AP78358 180 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 LGALS9BQ3B8N2 356 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 IBA57Q5T440 356 aaKnown RBP3.24□□□□□ -1.89
ATXN3-243ENST00000556671 Q86TA4 180 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 POM121L12Q8N7R1 296 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 C15orf53Q8NAA6 179 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 FAM210BQ96KR6 192 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 LINC00467Q9BRT7 94 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 TPPP3Q9BW30 176 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 VAX2Q9UIW0 290 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 PHLDA3Q9Y5J5 127 aa3.24□□□□□ -1.89
ATXN3-243ENST00000556671 IGLV9-49A0A0B4J1Y8 123 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 TRAV1-1A0A0B4J248 108 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 M0R381 172 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 PDE6DO43924 150 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 LTAP01374 205 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 SMIM6P0DI80 62 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 CRIP1P50238 77 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 RPL19P84098 196 aaKnown RBP3.23□□□□□ -1.89
ATXN3-243ENST00000556671 MEF2BQ02080 365 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-243ENST00000556671 SLAQ13239 276 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 RHEBQ15382 184 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 KIAA1644Q3SXP7 199 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 CENPWQ5EE01 88 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 FAM74A4Q5TZK3 123 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 ATRAIDQ6UW56 229 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 DERL1Q9BUN8 251 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 PRO0255Q9UI72 69 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 ICOSQ9Y6W8 199 aa3.23□□□□□ -1.89
ATXN3-243ENST00000556671 A0A087X002 238 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 TRAV4A0A0B4J268 109 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 LOC100131303A0A0U1RQF7 123 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 C1orf196B1AJZ1 125 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 P01737 135 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 SMIM17P0DL12 118 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 GZMBP10144 247 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 BCL2P10415 239 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 SRIP30626 198 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 CRYBA4P53673 196 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 MRPL23Q16540 153 aaKnown RBP3.22□□□□□ -1.89
ATXN3-243ENST00000556671 ESRGQ1W209 222 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 TDRG1Q3Y452 100 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 FAM74A3Q4VXF1 159 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 ZNF506Q5JVG8 444 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 DNLZQ5SXM8 178 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 SPANXN1Q5VSR9 72 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 OR2D3Q8NGH3 330 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 RASL10AQ92737 203 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 VSIG2Q96IQ7 327 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 TXNDC17Q9BRA2 123 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 PRADC1Q9BSG0 188 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 JPT2Q9H910 190 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 LINC00588Q9Y4M8 146 aa3.22□□□□□ -1.89
ATXN3-243ENST00000556671 CSMD3Q7Z407 3707 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 A0A087WWC5 75 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 TRBV6-1A0A0K0K1D8 114 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 COLCA2A8K830 154 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 ZNF727A8MUV8 499 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 A8MWV9 139 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 RS1O15537 224 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 S100A6P06703 90 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 MGPP08493 103 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 RNASE3P12724 160 aaKnown RBP3.21□□□□□ -1.9
ATXN3-243ENST00000556671 ADCYAP1P18509 176 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 TAGLN2P37802 199 aaKnown RBP3.21□□□□□ -1.9
ATXN3-243ENST00000556671 CFAP126Q5VTH2 177 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 LYPD5Q6UWN5 251 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 NEGR1Q7Z3B1 354 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 LINC00612Q8N6U2 182 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 MAPKAPK5-AS1Q8N8E1 139 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 C9orf85Q96MD7 179 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 OPRPNQ99935 248 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-243ENST00000556671 IL36BQ9NZH7 164 aa3.21□□□□□ -1.9
ATXN3-243ENST00000556671 XKRY2A2RUG3 117 aa3.2□□□□□ -1.9
ATXN3-243ENST00000556671 F8WDY8 70 aa3.2□□□□□ -1.9
ATXN3-243ENST00000556671 K7EQD1 137 aa3.2□□□□□ -1.9
ATXN3-243ENST00000556671 GATCO43716 136 aaKnown RBP3.2□□□□□ -1.9
ATXN3-243ENST00000556671 S100PP25815 95 aa3.2□□□□□ -1.9
ATXN3-243ENST00000556671 RPS20P60866 119 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms