RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 SMIM15Q7Z3B0 74 aa11.6□□□□□ -0.55
PSEN1-217ENST00000556533 FRAS1Q86XX4 4008 aa11.6□□□□□ -0.55
PSEN1-217ENST00000556533 HIGD1CA8MV81 97 aa11.59□□□□□ -0.55
PSEN1-217ENST00000556533 H7C1H1 209 aa11.59□□□□□ -0.55
PSEN1-217ENST00000556533 M0QY20 66 aa11.59□□□□□ -0.55
PSEN1-217ENST00000556533 FOXA3P55318 350 aaPredicted RBP11.59□□□□□ -0.55
PSEN1-217ENST00000556533 TNP2Q05952 138 aa11.59□□□□□ -0.55
PSEN1-217ENST00000556533 CNFNQ9BYD5 112 aa11.59□□□□□ -0.55
PSEN1-217ENST00000556533 V9GYV3 84 aa11.59□□□□□ -0.55
PSEN1-217ENST00000556533 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-217ENST00000556533 LINC01556Q5JQF7 62 aa11.57□□□□□ -0.56
PSEN1-217ENST00000556533 Q8N3U1 123 aa11.57□□□□□ -0.56
PSEN1-217ENST00000556533 C10orf126Q8N4M7 172 aa11.57□□□□□ -0.56
PSEN1-217ENST00000556533 GFRA4Q9GZZ7 299 aa11.57□□□□□ -0.56
PSEN1-217ENST00000556533 A0A1B0GUT8 65 aa11.56□□□□□ -0.56
PSEN1-217ENST00000556533 K7EP13 123 aa11.56□□□□□ -0.56
PSEN1-217ENST00000556533 BTF3P20290 206 aaKnown RBP11.56□□□□□ -0.56
PSEN1-217ENST00000556533 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
PSEN1-217ENST00000556533 TRAV26-2A0A0B4J265 109 aa11.55□□□□□ -0.56
PSEN1-217ENST00000556533 A0A1B0GVY2 172 aa11.55□□□□□ -0.56
PSEN1-217ENST00000556533 FAM231BA6NCW3 169 aa11.55□□□□□ -0.56
PSEN1-217ENST00000556533 DNAJC30Q96LL9 226 aa11.55□□□□□ -0.56
PSEN1-217ENST00000556533 URGCP-MRPS24S4R325 110 aa11.55□□□□□ -0.56
PSEN1-217ENST00000556533 FAT2Q9NYQ8 4349 aa11.54□□□□□ -0.56
PSEN1-217ENST00000556533 TMEM262E9PQX1 116 aa11.54□□□□□ -0.56
PSEN1-217ENST00000556533 DAZ4Q86SG3 579 aaKnown RBP11.54□□□□□ -0.56
PSEN1-217ENST00000556533 NFE4Q86UQ8 179 aa11.54□□□□□ -0.56
PSEN1-217ENST00000556533 NUP35Q8NFH5 326 aa11.54□□□□□ -0.56
PSEN1-217ENST00000556533 Q9HAA7 133 aa11.54□□□□□ -0.56
PSEN1-217ENST00000556533 NIT2Q9NQR4 276 aa11.54□□□□□ -0.56
PSEN1-217ENST00000556533 DAZ3Q9NR90 486 aaKnown RBP11.54□□□□□ -0.56
PSEN1-217ENST00000556533 BIRC6Q9NR09 4857 aa11.54□□□□□ -0.56
PSEN1-217ENST00000556533 TRBV6-8A0A0A6YYG3 113 aa11.53□□□□□ -0.56
PSEN1-217ENST00000556533 RIGQ13278 110 aa11.53□□□□□ -0.56
PSEN1-217ENST00000556533 KCNIP4Q6PIL6 250 aa11.53□□□□□ -0.56
PSEN1-217ENST00000556533 GATD1Q8NB37 220 aa11.53□□□□□ -0.56
PSEN1-217ENST00000556533 DEFB104AQ8WTQ1 72 aa11.53□□□□□ -0.56
PSEN1-217ENST00000556533 NAT8BQ9UHF3 227 aa11.53□□□□□ -0.56
PSEN1-217ENST00000556533 A0A087WX48 190 aa11.52□□□□□ -0.57
PSEN1-217ENST00000556533 IBA57-AS1B1ANH7 110 aa11.52□□□□□ -0.57
PSEN1-217ENST00000556533 CHCHD5Q9BSY4 110 aa11.52□□□□□ -0.57
PSEN1-217ENST00000556533 SMIM27A0A1W2PRY6 76 aa11.51□□□□□ -0.57
PSEN1-217ENST00000556533 Q6ZRN7 208 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-217ENST00000556533 NIT1Q86X76 327 aa11.51□□□□□ -0.57
PSEN1-217ENST00000556533 HECTD4Q9Y4D8 3996 aa11.51□□□□□ -0.57
PSEN1-217ENST00000556533 TMEM97Q5BJF2 176 aa11.5□□□□□ -0.57
PSEN1-217ENST00000556533 NTM-AS1Q6ZSK4 140 aa11.5□□□□□ -0.57
PSEN1-217ENST00000556533 RPL39LQ96EH5 51 aaKnown RBP11.5□□□□□ -0.57
PSEN1-217ENST00000556533 PSCAO43653 123 aa11.49□□□□□ -0.57
PSEN1-217ENST00000556533 TMEM191AQ9H0A3 160 aa11.49□□□□□ -0.57
PSEN1-217ENST00000556533 CAMPP49913 170 aa11.48□□□□□ -0.57
PSEN1-217ENST00000556533 GAGE6Q13070 117 aa11.48□□□□□ -0.57
PSEN1-217ENST00000556533 AMN1Q8IY45 258 aa11.48□□□□□ -0.57
PSEN1-217ENST00000556533 KLK12Q9UKR0 248 aa11.48□□□□□ -0.57
PSEN1-217ENST00000556533 TRBV25-1A0A075B6N4 114 aa11.47□□□□□ -0.57
PSEN1-217ENST00000556533 IGHV1-24A0A0C4DH33 117 aa11.47□□□□□ -0.57
PSEN1-217ENST00000556533 RAB4AP20338 218 aa11.47□□□□□ -0.57
PSEN1-217ENST00000556533 PNRC1Q12796 327 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-217ENST00000556533 MRPL54Q6P161 138 aaKnown RBP11.47□□□□□ -0.57
PSEN1-217ENST00000556533 UQCC3Q6UW78 93 aa11.47□□□□□ -0.57
PSEN1-217ENST00000556533 COMMD7Q86VX2 200 aa11.47□□□□□ -0.57
PSEN1-217ENST00000556533 FRZBQ92765 325 aa11.47□□□□□ -0.57
PSEN1-217ENST00000556533 PKD1P98161 4303 aa11.47□□□□□ -0.57
PSEN1-217ENST00000556533 F8W036 122 aa11.46□□□□□ -0.57
PSEN1-217ENST00000556533 EREGO14944 169 aa11.46□□□□□ -0.57
PSEN1-217ENST00000556533 PPP1R2P9O14990 202 aa11.46□□□□□ -0.57
PSEN1-217ENST00000556533 GAS8-AS1O95177 125 aa11.46□□□□□ -0.57
PSEN1-217ENST00000556533 MT-ND4LP03901 98 aa11.46□□□□□ -0.57
PSEN1-217ENST00000556533 ELOBQ15370 118 aa11.46□□□□□ -0.57
PSEN1-217ENST00000556533 SPATA12Q7Z6I5 190 aa11.46□□□□□ -0.57
PSEN1-217ENST00000556533 RNF185Q96GF1 192 aa11.46□□□□□ -0.57
PSEN1-217ENST00000556533 TRAV8-3A0A0A6YYJ7 113 aa11.45□□□□□ -0.58
PSEN1-217ENST00000556533 TMEM218A2RU14 115 aa11.45□□□□□ -0.58
PSEN1-217ENST00000556533 COTL1Q14019 142 aa11.45□□□□□ -0.58
PSEN1-217ENST00000556533 LAGE3Q14657 143 aa11.45□□□□□ -0.58
PSEN1-217ENST00000556533 MPV17L2Q567V2 206 aa11.45□□□□□ -0.58
PSEN1-217ENST00000556533 ATRAIDQ6UW56 229 aa11.45□□□□□ -0.58
PSEN1-217ENST00000556533 CHCHD7Q9BUK0 85 aa11.45□□□□□ -0.58
PSEN1-217ENST00000556533 SMKR1H3BMG3 65 aa11.44□□□□□ -0.58
PSEN1-217ENST00000556533 PKIAP61925 76 aa11.44□□□□□ -0.58
PSEN1-217ENST00000556533 IQCJQ1A5X6 159 aa11.44□□□□□ -0.58
PSEN1-217ENST00000556533 Q8N976 141 aa11.44□□□□□ -0.58
PSEN1-217ENST00000556533 UBE2WQ96B02 151 aa11.44□□□□□ -0.58
PSEN1-217ENST00000556533 MRAP2Q96G30 205 aa11.44□□□□□ -0.58
PSEN1-217ENST00000556533 TMEM243Q9BU79 118 aa11.44□□□□□ -0.58
PSEN1-217ENST00000556533 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
PSEN1-217ENST00000556533 A0A1B0GW15 77 aa11.43□□□□□ -0.58
PSEN1-217ENST00000556533 C16orf90A8MZG2 172 aa11.43□□□□□ -0.58
PSEN1-217ENST00000556533 NCR2O95944 276 aa11.43□□□□□ -0.58
PSEN1-217ENST00000556533 ANGP03950 147 aaKnown RBP11.43□□□□□ -0.58
PSEN1-217ENST00000556533 PMCHP20382 165 aa11.43□□□□□ -0.58
PSEN1-217ENST00000556533 AMTP48728 403 aa11.43□□□□□ -0.58
PSEN1-217ENST00000556533 ANAPC16Q96DE5 110 aa11.43□□□□□ -0.58
PSEN1-217ENST00000556533 TM2D2Q9BX73 214 aa11.43□□□□□ -0.58
PSEN1-217ENST00000556533 A0A087WTM6 91 aa11.42□□□□□ -0.58
PSEN1-217ENST00000556533 SDHAF1A6NFY7 115 aa11.42□□□□□ -0.58
PSEN1-217ENST00000556533 UBE2L6O14933 153 aa11.42□□□□□ -0.58
PSEN1-217ENST00000556533 ADCYAP1P18509 176 aa11.42□□□□□ -0.58
PSEN1-217ENST00000556533 FUSP35637 526 aaKnown RBP eCLIP11.42□□□□□ -0.58
PSEN1-217ENST00000556533 RPS10P46783 165 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms