RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 OSTCQ9NRP0 149 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 HIGD1BQ9P298 99 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 MRPS12O15235 138 aaKnown RBP3.89□□□□□ -1.79
TMEM260-210ENST00000556422 ZNF491Q8N8L2 437 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 PTPN13Q12923 2485 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 SMIM27A0A1W2PRY6 76 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 NDUFC2-KCTD14E9PQ53 114 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 LYZP61626 148 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 LINC00322Q6ZN03 302 aaPredicted RBP3.89□□□□□ -1.79
TMEM260-210ENST00000556422 PCP2Q8IVA1 136 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 C17orf77Q96MU5 243 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 METTL26Q96S19 204 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 TIMM17AQ99595 171 aa3.89□□□□□ -1.79
TMEM260-210ENST00000556422 CSPG4Q6UVK1 2322 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 SYNJ2BPP57105 145 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 OR8A1Q8NGG7 326 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 HIST1H4GQ99525 98 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 TMEM243Q9BU79 118 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 PRO0461Q9UI25 63 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 AKAP9Q99996 3911 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 WI2-2373I1.2A0A1W2PRP0 233 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 H3BRN7 92 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 TIMM17BO60830 172 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 IGLV2-11P01706 119 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 Q9H3A6 140 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 TMEM14CQ9P0S9 112 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 SERP1Q9Y6X1 66 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 ABCA12Q86UK0 2595 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 PRB4P10163 310 aaPredicted RBP3.88□□□□□ -1.79
TMEM260-210ENST00000556422 LGALS9BQ3B8N2 356 aa3.88□□□□□ -1.79
TMEM260-210ENST00000556422 IGHV4-61A0A0C4DH41 118 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 LINC01548A6NM66 108 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 HOXA3O43365 443 aaPredicted RBP3.87□□□□□ -1.79
TMEM260-210ENST00000556422 LTAP01374 205 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 CXCL5P42830 114 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 APCP25054 2843 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 DOPEY2Q9Y3R5 2298 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 SETXQ7Z333 2677 aaKnown RBP3.87□□□□□ -1.79
TMEM260-210ENST00000556422 TENM4Q6N022 2769 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 C2orf70A6NJV1 201 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 NCR2O95944 276 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 IGHV3-23P01764 117 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 KLK9Q2XQG4 91 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 NTN5Q8WTR8 489 aaPredicted RBP3.87□□□□□ -1.79
TMEM260-210ENST00000556422 DPH3P1Q9H4G8 78 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 KLK9Q9UKQ9 250 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 TRBV19A0A075B6N1 114 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 CTSGP08311 255 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 SS18Q15532 418 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 PIFOQ8TCI5 191 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 TEX15Q9BXT5 2789 aa3.87□□□□□ -1.79
TMEM260-210ENST00000556422 C19orf71A6NCJ1 209 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 UBE2L6O14933 153 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 ATP6V0E1O15342 81 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 GDF5OSQ5U4N7 250 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 LGALS9CQ6DKI2 356 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 MDFIQ99750 246 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 CHAC1Q9BUX1 264 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 IMUPQ9GZP8 106 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 AAMDCQ9H7C9 122 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 RBMY1BA6NDE4 496 aaKnown RBP3.86□□□□□ -1.79
TMEM260-210ENST00000556422 RBMY1EA6NEQ0 496 aaKnown RBP3.86□□□□□ -1.79
TMEM260-210ENST00000556422 SLC25A20O43772 301 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 GHRHP01286 108 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 RBMY1DP0C7P1 496 aaKnown RBP3.86□□□□□ -1.79
TMEM260-210ENST00000556422 RBMY1A1P0DJD3 496 aaKnown RBP3.86□□□□□ -1.79
TMEM260-210ENST00000556422 RPL18AQ02543 176 aaKnown RBP3.86□□□□□ -1.79
TMEM260-210ENST00000556422 NSUN5P1Q3KNT7 163 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 FAM222AQ5U5X8 452 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 Q86TA4 180 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 MPLKIPQ8TAP9 179 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 UNC79Q9P2D8 2635 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 IGHV4-30-2A0A087WSY4 118 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 G3V318 75 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 PAPPA-AS1Q5QFB9 102 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 C5orf56Q8N8D9 126 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 CCL19Q99731 98 aa3.86□□□□□ -1.79
TMEM260-210ENST00000556422 IGHV3OR16-10A0A075B7F0 116 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 IZUMO1RA6ND01 250 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 HIGD1CA8MV81 97 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 M0R3E3 92 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 PSMB8P28062 276 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 C19orf54Q5BKX5 351 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 BRD3OSQ6XYD6 125 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 GCN1Q92616 2671 aaKnown RBP3.85□□□□□ -1.79
TMEM260-210ENST00000556422 CR1P17927 2039 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 TRAV40A0A0B4J280 105 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 A0A1B0GXF2 115 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 C15orf32Q32M92 178 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 BEAN1Q3B7T3 259 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 CEMP1Q6PRD7 247 aaPredicted RBP3.85□□□□□ -1.79
TMEM260-210ENST00000556422 C8orf87E5RJ46 101 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 K7EMI3 77 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 IGHV4-38-2P0DP08 117 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 ZFAND3Q9H8U3 227 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 SMAD5-AS1Q9Y6J3 95 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 MYO9AB2RTY4 2548 aa3.85□□□□□ -1.79
TMEM260-210ENST00000556422 IGHV3OR16-8A0A075B7F1 116 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 IGHV3-35A0A0C4DH35 117 aa3.84□□□□□ -1.79
TMEM260-210ENST00000556422 TRBV6-1A0A0K0K1D8 114 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms