RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 MLST8Q9BVC4 326 aa8.62□□□□□ -1.03
TGFB3-204ENST00000556285 ANGP03950 147 aaKnown RBP8.61□□□□□ -1.03
TGFB3-204ENST00000556285 Q0VG73 95 aa8.61□□□□□ -1.03
TGFB3-204ENST00000556285 KCNIP4Q6PIL6 250 aa8.61□□□□□ -1.03
TGFB3-204ENST00000556285 FAM213BQ8TBF2 198 aa8.61□□□□□ -1.03
TGFB3-204ENST00000556285 MBD3L1Q8WWY6 194 aa8.61□□□□□ -1.03
TGFB3-204ENST00000556285 C1orf43Q9BWL3 253 aa8.61□□□□□ -1.03
TGFB3-204ENST00000556285 USP17L23D6RBM5 183 aa8.6□□□□□ -1.03
TGFB3-204ENST00000556285 SNAI2O43623 268 aa8.6□□□□□ -1.03
TGFB3-204ENST00000556285 IGLV2-8P01709 118 aa8.6□□□□□ -1.03
TGFB3-204ENST00000556285 BAGE2Q86Y30 109 aa8.6□□□□□ -1.03
TGFB3-204ENST00000556285 KCNRGQ8N5I3 272 aa8.6□□□□□ -1.03
TGFB3-204ENST00000556285 CHCHD5Q9BSY4 110 aa8.6□□□□□ -1.03
TGFB3-204ENST00000556285 SSBP4Q9BWG4 385 aaPredicted RBP8.6□□□□□ -1.03
TGFB3-204ENST00000556285 ZNF471Q9BX82 626 aaPredicted RBP8.6□□□□□ -1.03
TGFB3-204ENST00000556285 F5H697 171 aa8.59□□□□□ -1.03
TGFB3-204ENST00000556285 HLA-DQA1P01909 254 aa8.59□□□□□ -1.03
TGFB3-204ENST00000556285 PRSS1P07477 247 aa8.59□□□□□ -1.03
TGFB3-204ENST00000556285 CXCL1P09341 107 aa8.59□□□□□ -1.03
TGFB3-204ENST00000556285 HNRNPA3P51991 378 aaKnown RBP8.59□□□□□ -1.03
TGFB3-204ENST00000556285 KRTAP26-1Q6PEX3 210 aa8.59□□□□□ -1.03
TGFB3-204ENST00000556285 CLPSL2Q6UWE3 100 aa8.59□□□□□ -1.03
TGFB3-204ENST00000556285 KIF25-AS1Q9Y6Z4 181 aa8.59□□□□□ -1.03
TGFB3-204ENST00000556285 CRPP02741 224 aa8.58□□□□□ -1.04
TGFB3-204ENST00000556285 S100A9P06702 114 aaKnown RBP8.58□□□□□ -1.04
TGFB3-204ENST00000556285 OR5AL1P0C617 328 aa8.58□□□□□ -1.04
TGFB3-204ENST00000556285 GAGE6Q13070 117 aa8.58□□□□□ -1.04
TGFB3-204ENST00000556285 SPANXN1Q5VSR9 72 aa8.58□□□□□ -1.04
TGFB3-204ENST00000556285 SVIPQ8NHG7 77 aa8.58□□□□□ -1.04
TGFB3-204ENST00000556285 PANO1I0J062 215 aa8.57□□□□□ -1.04
TGFB3-204ENST00000556285 GZMBP10144 247 aa8.57□□□□□ -1.04
TGFB3-204ENST00000556285 RBX1P62877 108 aa8.57□□□□□ -1.04
TGFB3-204ENST00000556285 CCL20P78556 96 aa8.57□□□□□ -1.04
TGFB3-204ENST00000556285 C14orf177Q52M58 125 aa8.57□□□□□ -1.04
TGFB3-204ENST00000556285 TMUB2Q71RG4 321 aa8.57□□□□□ -1.04
TGFB3-204ENST00000556285 DERL1Q9BUN8 251 aa8.57□□□□□ -1.04
TGFB3-204ENST00000556285 PFDN1O60925 122 aa8.56□□□□□ -1.04
TGFB3-204ENST00000556285 ZNF345Q14585 488 aa8.56□□□□□ -1.04
TGFB3-204ENST00000556285 RGS21Q2M5E4 152 aa8.56□□□□□ -1.04
TGFB3-204ENST00000556285 LINC00269Q8N2A0 174 aa8.56□□□□□ -1.04
TGFB3-204ENST00000556285 CLRN3Q8NCR9 226 aa8.56□□□□□ -1.04
TGFB3-204ENST00000556285 VAX2Q9UIW0 290 aa8.56□□□□□ -1.04
TGFB3-204ENST00000556285 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.56□□□□□ -1.04
TGFB3-204ENST00000556285 UMAD1C9J7I0 102 aa8.55□□□□□ -1.04
TGFB3-204ENST00000556285 H2AFB1P0C5Y9 115 aa8.55□□□□□ -1.04
TGFB3-204ENST00000556285 RPL35P42766 123 aaKnown RBP8.55□□□□□ -1.04
TGFB3-204ENST00000556285 MIAQ16674 131 aa8.55□□□□□ -1.04
TGFB3-204ENST00000556285 DAZAP1Q96EP5 407 aaKnown RBP8.55□□□□□ -1.04
TGFB3-204ENST00000556285 PRR34Q9NV39 138 aa8.55□□□□□ -1.04
TGFB3-204ENST00000556285 MGPP08493 103 aa8.54□□□□□ -1.04
TGFB3-204ENST00000556285 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
TGFB3-204ENST00000556285 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
TGFB3-204ENST00000556285 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 M0QY20 66 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 BCL2L11O43521 198 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 OXTP01178 125 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 IGLC6P0CF74 106 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 SMIM17P0DL12 118 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 C9orf163Q8N9P6 203 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 AP1S3Q96PC3 154 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 GFRA4Q9GZZ7 299 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 GNG13Q9P2W3 67 aa8.53□□□□□ -1.04
TGFB3-204ENST00000556285 TNXBP22105 4242 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 TRBV25-1A0A075B6N4 114 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 RAB19A4D1S5 217 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 HMSDA8MTL9 139 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 PKIAP61925 76 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 ODF1Q14990 250 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 IQCJQ1A5X6 159 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 TMEM97Q5BJF2 176 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 CENPWQ5EE01 88 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 SUMO4Q6EEV6 95 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 DGAT2L7PQ6IED9 249 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 SDIM1Q6ZPB5 146 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.52□□□□□ -1.05
TGFB3-204ENST00000556285 C20orf203Q8NBC4 194 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 OR2D3Q8NGH3 330 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 C11orf52Q96A22 123 aa8.52□□□□□ -1.05
TGFB3-204ENST00000556285 IGLV4-60A0A075B6I1 120 aa8.51□□□□□ -1.05
TGFB3-204ENST00000556285 IGHV1-24A0A0C4DH33 117 aa8.51□□□□□ -1.05
TGFB3-204ENST00000556285 A0A0D9SG52 128 aa8.51□□□□□ -1.05
TGFB3-204ENST00000556285 KANTRA0A1W2PQU2 76 aa8.51□□□□□ -1.05
TGFB3-204ENST00000556285 C19orf71A6NCJ1 209 aa8.51□□□□□ -1.05
TGFB3-204ENST00000556285 NKX2-5P52952 324 aaPredicted RBP8.51□□□□□ -1.05
TGFB3-204ENST00000556285 REG3AQ06141 175 aa8.51□□□□□ -1.05
TGFB3-204ENST00000556285 SERTAD4-AS1Q5TG53 156 aa8.51□□□□□ -1.05
TGFB3-204ENST00000556285 FER1L6-AS1Q8NA97 138 aa8.51□□□□□ -1.05
TGFB3-204ENST00000556285 RAB5CP51148 216 aa8.5□□□□□ -1.05
TGFB3-204ENST00000556285 SLPIP03973 132 aa8.49□□□□□ -1.05
TGFB3-204ENST00000556285 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
TGFB3-204ENST00000556285 MANBALQ9NQG1 85 aa8.49□□□□□ -1.05
TGFB3-204ENST00000556285 PLA2G2DQ9UNK4 145 aa8.49□□□□□ -1.05
TGFB3-204ENST00000556285 TRBV20OR9-2A0A075B6H5 130 aa8.48□□□□□ -1.05
TGFB3-204ENST00000556285 TRAV1-1A0A0B4J248 108 aa8.48□□□□□ -1.05
TGFB3-204ENST00000556285 LYZL1Q6UWQ5 148 aa8.48□□□□□ -1.05
TGFB3-204ENST00000556285 TMEM243Q9BU79 118 aa8.48□□□□□ -1.05
TGFB3-204ENST00000556285 hDV102S1A0JD36 115 aa8.47□□□□□ -1.05
TGFB3-204ENST00000556285 H7C1H1 209 aa8.47□□□□□ -1.05
TGFB3-204ENST00000556285 CHTF8P0CG12 524 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms