RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 C16orf74Q96GX8 76 aa4.55□□□□□ -1.68
HIF1A-208ENST00000556237 NOP10Q9NPE3 64 aaKnown RBP4.55□□□□□ -1.68
HIF1A-208ENST00000556237 ATRQ13535 2644 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 IGHV3-73A0A0B4J1V6 119 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 TRAV26-2A0A0B4J265 109 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 A8MZ25 164 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 RS1O15537 224 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 SERF1AO75920 110 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 TNFRSF6BO95407 300 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 NPYP01303 97 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 NPSP0C0P6 89 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 LINC00614P0C842 121 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 EMP1P54849 157 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 RIPPLY3P57055 190 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 DAZ2Q13117 558 aaKnown RBP4.54□□□□□ -1.68
HIF1A-208ENST00000556237 DEFB135Q30KP9 77 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 DEFB121Q5J5C9 76 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 PIK3CD-AS1Q5SR53 167 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 HIST3H2BBQ8N257 126 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 POM121L12Q8N7R1 296 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 OR4C5Q8NGB2 326 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 OR11H2Q8NH07 326 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 RASL10AQ92737 203 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 OVOL2Q9BRP0 275 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 MAP1LC3AQ9H492 121 aa4.54□□□□□ -1.68
HIF1A-208ENST00000556237 PLAC8L1A1L4L8 177 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 GAGE7O76087 117 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 PPP1R17O96001 155 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 PRB2P02812 416 aaPredicted RBP4.53□□□□□ -1.68
HIF1A-208ENST00000556237 GAGE12FP0CL80 117 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 GAGE12GP0CL81 117 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 GAGE12IP0CL82 117 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 IFI27P40305 119 aaPredicted RBP4.53□□□□□ -1.68
HIF1A-208ENST00000556237 AKR1D1P51857 326 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 ZNF56Q15929 161 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 LGALS9BQ3B8N2 356 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 CFAP126Q5VTH2 177 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 SUMO4Q6EEV6 95 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 RNASEKQ6P5S7 137 aaKnown RBP4.53□□□□□ -1.68
HIF1A-208ENST00000556237 Q6ZTI0 123 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 FA2HQ7L5A8 372 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 NRACQ8N912 160 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 RNF183Q96D59 192 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 LAMTOR2Q9Y2Q5 125 aa4.53□□□□□ -1.68
HIF1A-208ENST00000556237 NIPBLQ6KC79 2804 aaeCLIP4.52□□□□□ -1.69
HIF1A-208ENST00000556237 TRGV2A0A075B6R0 118 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 DEFB4AO15263 64 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 HSBP1O75506 76 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 IGHV3-53P01767 116 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 ESDP10768 282 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 FABP4P15090 132 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 FAM19A2Q8N3H0 131 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 SVIPQ8NHG7 77 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 TMEM18Q96B42 140 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 CHCHD1Q96BP2 118 aaKnown RBP4.52□□□□□ -1.69
HIF1A-208ENST00000556237 RPL39LQ96EH5 51 aaKnown RBP4.52□□□□□ -1.69
HIF1A-208ENST00000556237 URB1-AS1Q96HZ7 61 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 NDUFAF3Q9BU61 184 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 ST20Q9HBF5 79 aa4.52□□□□□ -1.69
HIF1A-208ENST00000556237 FBN1P35555 2871 aaKnown RBP4.51□□□□□ -1.69
HIF1A-208ENST00000556237 TRAV4A0A0B4J268 109 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 IGHV4-28A0A0C4DH34 117 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 IFITM10A6NMD0 228 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 PRSS47A8MTI9 375 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 H7C1H1 209 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 K7EIL1 84 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 M0QY20 66 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 RHODO00212 210 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 DEFB130BP0DP73 79 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 DEFB130AP0DP74 79 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 MIFP14174 115 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 PMCHP20382 165 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 AMTP48728 403 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 SUMO2P61956 95 aaKnown RBP4.51□□□□□ -1.69
HIF1A-208ENST00000556237 UFSP1Q6NVU6 142 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 ZFP2Q6ZN57 461 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 Q8N8P6 123 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 OR10D4PQ8NGN7 298 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 ZNF479Q96JC4 524 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 HIST1H2BLQ99880 126 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 C20orf78Q9BR46 151 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 NXT2Q9NPJ8 142 aaKnown RBP4.51□□□□□ -1.69
HIF1A-208ENST00000556237 NIT2Q9NQR4 276 aa4.51□□□□□ -1.69
HIF1A-208ENST00000556237 TRGV4A0A0C4DH28 118 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 LYRM9A8MSI8 78 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 VCYO14598 125 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 TCAPO15273 167 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 CIDEAO60543 219 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 P0DMU3 169 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 FAM231AP0DMU4 169 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 FAM231CP0DMU5 169 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 PMCHL1Q16048 86 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 KPRPQ5T749 579 aaPredicted RBP4.5□□□□□ -1.69
HIF1A-208ENST00000556237 FAM222AQ5U5X8 452 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 SBSPONQ8IVN8 264 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 MRAPQ8TCY5 172 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 RETNQ9HD89 108 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 TP53TG1Q9Y2A0 90 aa4.5□□□□□ -1.69
HIF1A-208ENST00000556237 IGLV2-18A0A075B6J9 118 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms