RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 IGHV3OR16-12A0A075B7B8 117 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 K7EIL1 84 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 M0R381 172 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 PRB2P02812 416 aaPredicted RBP4.48□□□□□ -1.69
LINC00643-203ENST00000555518 S100A8P05109 93 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 CRYGDP07320 174 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 HTN1P15515 57 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 RAB4AP20338 218 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 RAB4BP61018 213 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 SSTP61278 116 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 ZNF415Q09FC8 603 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 DEFB135Q30KP9 77 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 MRPL51Q4U2R6 128 aaKnown RBP4.48□□□□□ -1.69
LINC00643-203ENST00000555518 COA6Q5JTJ3 125 aaKnown RBP4.48□□□□□ -1.69
LINC00643-203ENST00000555518 SPANXN1Q5VSR9 72 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 CFAP161Q6P656 301 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 BORCS7Q96B45 105 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 ALKBH7Q9BT30 221 aaPredicted RBP4.48□□□□□ -1.69
LINC00643-203ENST00000555518 SAMD10Q9BYL1 202 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 ZMAT5Q9UDW3 170 aaKnown RBP4.48□□□□□ -1.69
LINC00643-203ENST00000555518 GOLT1BQ9Y3E0 138 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 PHLDA3Q9Y5J5 127 aa4.48□□□□□ -1.69
LINC00643-203ENST00000555518 SMKR1H3BMG3 65 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 M0R2P5 195 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 UBE2CO00762 179 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 SRIP30626 198 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 APOC4P55056 127 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 RAB5BP61020 215 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 DAZ2Q13117 558 aaKnown RBP4.47□□□□□ -1.69
LINC00643-203ENST00000555518 LINC00612Q8N6U2 182 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 C14orf178Q8N769 122 aaPredicted RBP4.47□□□□□ -1.69
LINC00643-203ENST00000555518 Q8NAQ8 132 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 RASL10AQ92737 203 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 RNF183Q96D59 192 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 C16orf74Q96GX8 76 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 URB1-AS1Q96HZ7 61 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 AP1S3Q96PC3 154 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 RCHY1Q96PM5 261 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 OVOL2Q9BRP0 275 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 SPXQ9BT56 116 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 TMEM208Q9BTX3 173 aa4.47□□□□□ -1.69
LINC00643-203ENST00000555518 MRPL16Q9NX20 251 aaKnown RBP4.47□□□□□ -1.69
LINC00643-203ENST00000555518 HUWE1Q7Z6Z7 4374 aaKnown RBP4.46□□□□□ -1.69
LINC00643-203ENST00000555518 C5orf52A6NGY3 159 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 SMIM9A6NGZ8 99 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 D6R8Y8 96 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 RS1O15537 224 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 NUPR1O60356 82 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 NCR2O95944 276 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 GATA1P15976 413 aaPredicted RBP4.46□□□□□ -1.7
LINC00643-203ENST00000555518 Q0VG73 95 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 IQCJQ1A5X6 159 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 RRN3P1Q2M238 152 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 ZNF876PQ49A33 203 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 Q6ZTI0 123 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 C18orf32Q8TCD1 76 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 NDUFAF3Q9BU61 184 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 DPH3P1Q9H4G8 78 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 RETNQ9HD89 108 aa4.46□□□□□ -1.7
LINC00643-203ENST00000555518 PRKDCP78527 4128 aaKnown RBP4.45□□□□□ -1.7
LINC00643-203ENST00000555518 DNAH9Q9NYC9 4486 aa4.45□□□□□ -1.7
LINC00643-203ENST00000555518 TRAV26-2A0A0B4J265 109 aa4.45□□□□□ -1.7
LINC00643-203ENST00000555518 IGHV4-28A0A0C4DH34 117 aa4.45□□□□□ -1.7
LINC00643-203ENST00000555518 IFITM10A6NMD0 228 aa4.45□□□□□ -1.7
LINC00643-203ENST00000555518 NPYP01303 97 aa4.45□□□□□ -1.7
LINC00643-203ENST00000555518 LGALS9BQ3B8N2 356 aa4.45□□□□□ -1.7
LINC00643-203ENST00000555518 CFAP126Q5VTH2 177 aa4.45□□□□□ -1.7
LINC00643-203ENST00000555518 EDA2RQ9HAV5 297 aa4.45□□□□□ -1.7
LINC00643-203ENST00000555518 NOP10Q9NPE3 64 aaKnown RBP4.45□□□□□ -1.7
LINC00643-203ENST00000555518 TP53TG1Q9Y2A0 90 aa4.45□□□□□ -1.7
LINC00643-203ENST00000555518 IGLV2-18A0A075B6J9 118 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 TRGV1A0A0A0MS02 117 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 LOC105371267A0A1B0GV96 52 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 M0QY20 66 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 PPBPP02775 128 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 ESDP10768 282 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 MIFP14174 115 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 NDUFA6P56556 154 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 SNRPEP62304 92 aaKnown RBP4.44□□□□□ -1.7
LINC00643-203ENST00000555518 OR10J3Q5JRS4 329 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 SBSPONQ8IVN8 264 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 OR11H2Q8NH07 326 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 TMEM18Q96B42 140 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 MRAP2Q96G30 205 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 PRELID3AQ96N28 172 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 C18orf15Q96N68 181 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 CELA1Q9UNI1 258 aa4.44□□□□□ -1.7
LINC00643-203ENST00000555518 TRAV4A0A0B4J268 109 aa4.43□□□□□ -1.7
LINC00643-203ENST00000555518 GAGE12JA6NER3 117 aa4.43□□□□□ -1.7
LINC00643-203ENST00000555518 LINC01546A6NGU7 62 aa4.43□□□□□ -1.7
LINC00643-203ENST00000555518 A8MWV9 139 aa4.43□□□□□ -1.7
LINC00643-203ENST00000555518 USP17L23D6RBM5 183 aa4.43□□□□□ -1.7
LINC00643-203ENST00000555518 SERF1AO75920 110 aa4.43□□□□□ -1.7
LINC00643-203ENST00000555518 MGPP08493 103 aa4.43□□□□□ -1.7
LINC00643-203ENST00000555518 CKS2P33552 79 aa4.43□□□□□ -1.7
LINC00643-203ENST00000555518 FAM74A4Q5TZK3 123 aa4.43□□□□□ -1.7
LINC00643-203ENST00000555518 FAM222AQ5U5X8 452 aa4.43□□□□□ -1.7
LINC00643-203ENST00000555518 ZFP2Q6ZN57 461 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms