RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CT83Q5H943 113 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 OR10G8Q8NGN5 311 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 DPH3P1Q9H4G8 78 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 SMDT1Q9H4I9 107 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 Q9UF83 564 aa8.22□□□□□ -1.09
SRP54-206ENST00000555317 ADIRFQ15847 76 aa8.21□□□□□ -1.1
SRP54-206ENST00000555317 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
SRP54-206ENST00000555317 TNFRSF18Q9Y5U5 241 aa8.21□□□□□ -1.1
SRP54-206ENST00000555317 PSCAO43653 123 aa8.2□□□□□ -1.1
SRP54-206ENST00000555317 PGLYRP4Q96LB8 373 aa8.2□□□□□ -1.1
SRP54-206ENST00000555317 CNFNQ9BYD5 112 aa8.2□□□□□ -1.1
SRP54-206ENST00000555317 OSTCQ9NRP0 149 aa8.2□□□□□ -1.1
SRP54-206ENST00000555317 NAT8Q9UHE5 227 aa8.2□□□□□ -1.1
SRP54-206ENST00000555317 KIF25-AS1Q9Y6Z4 181 aa8.2□□□□□ -1.1
SRP54-206ENST00000555317 A0A087WX48 190 aa8.19□□□□□ -1.1
SRP54-206ENST00000555317 TMEM97Q5BJF2 176 aa8.19□□□□□ -1.1
SRP54-206ENST00000555317 SUMO4Q6EEV6 95 aa8.19□□□□□ -1.1
SRP54-206ENST00000555317 DAZ4Q86SG3 579 aaKnown RBP8.19□□□□□ -1.1
SRP54-206ENST00000555317 TSKUQ8WUA8 353 aa8.19□□□□□ -1.1
SRP54-206ENST00000555317 GTSF1Q8WW33 167 aa8.19□□□□□ -1.1
SRP54-206ENST00000555317 DNAJC30Q96LL9 226 aa8.19□□□□□ -1.1
SRP54-206ENST00000555317 Q9HAA7 133 aa8.19□□□□□ -1.1
SRP54-206ENST00000555317 DAZ3Q9NR90 486 aaKnown RBP8.19□□□□□ -1.1
SRP54-206ENST00000555317 PKIAP61925 76 aa8.18□□□□□ -1.1
SRP54-206ENST00000555317 SRSF3P84103 164 aaKnown RBP8.18□□□□□ -1.1
SRP54-206ENST00000555317 LAGE3Q14657 143 aa8.18□□□□□ -1.1
SRP54-206ENST00000555317 RASL11AQ6T310 242 aa8.18□□□□□ -1.1
SRP54-206ENST00000555317 GFRA4Q9GZZ7 299 aa8.18□□□□□ -1.1
SRP54-206ENST00000555317 PKD1P98161 4303 aa8.18□□□□□ -1.1
SRP54-206ENST00000555317 TRBV6-8A0A0A6YYG3 113 aa8.17□□□□□ -1.1
SRP54-206ENST00000555317 HIGD1CA8MV81 97 aa8.17□□□□□ -1.1
SRP54-206ENST00000555317 C16orf90A8MZG2 172 aa8.17□□□□□ -1.1
SRP54-206ENST00000555317 IBA57-AS1B1ANH7 110 aa8.17□□□□□ -1.1
SRP54-206ENST00000555317 C9JQL5 133 aa8.17□□□□□ -1.1
SRP54-206ENST00000555317 TMEM262E9PQX1 116 aa8.17□□□□□ -1.1
SRP54-206ENST00000555317 M0QY20 66 aa8.17□□□□□ -1.1
SRP54-206ENST00000555317 RPL23P62829 140 aaKnown RBP8.17□□□□□ -1.1
SRP54-206ENST00000555317 ELOBQ15370 118 aa8.17□□□□□ -1.1
SRP54-206ENST00000555317 Q6ZRN7 208 aaPredicted RBP8.17□□□□□ -1.1
SRP54-206ENST00000555317 ISOC2Q96AB3 205 aa8.17□□□□□ -1.1
SRP54-206ENST00000555317 CHCHD5Q9BSY4 110 aa8.17□□□□□ -1.1
SRP54-206ENST00000555317 TRAV8-3A0A0A6YYJ7 113 aa8.16□□□□□ -1.1
SRP54-206ENST00000555317 A0A1B0GUT8 65 aa8.16□□□□□ -1.1
SRP54-206ENST00000555317 FAM231BA6NCW3 169 aa8.16□□□□□ -1.1
SRP54-206ENST00000555317 SPATA12Q7Z6I5 190 aa8.16□□□□□ -1.1
SRP54-206ENST00000555317 NIT1Q86X76 327 aa8.16□□□□□ -1.1
SRP54-206ENST00000555317 CHCHD7Q9BUK0 85 aa8.16□□□□□ -1.1
SRP54-206ENST00000555317 TM2D2Q9BX73 214 aa8.16□□□□□ -1.1
SRP54-206ENST00000555317 TRBV25-1A0A075B6N4 114 aa8.15□□□□□ -1.1
SRP54-206ENST00000555317 FOXA3P55318 350 aaPredicted RBP8.15□□□□□ -1.1
SRP54-206ENST00000555317 Q8N3U1 123 aa8.15□□□□□ -1.1
SRP54-206ENST00000555317 FRZBQ92765 325 aa8.15□□□□□ -1.1
SRP54-206ENST00000555317 RMI2Q96E14 147 aa8.15□□□□□ -1.1
SRP54-206ENST00000555317 NIT2Q9NQR4 276 aa8.15□□□□□ -1.1
SRP54-206ENST00000555317 V9GYV3 84 aa8.15□□□□□ -1.1
SRP54-206ENST00000555317 TRAV26-2A0A0B4J265 109 aa8.14□□□□□ -1.11
SRP54-206ENST00000555317 IGHV1-24A0A0C4DH33 117 aa8.14□□□□□ -1.11
SRP54-206ENST00000555317 RIGQ13278 110 aa8.14□□□□□ -1.11
SRP54-206ENST00000555317 NAT8BQ9UHF3 227 aa8.14□□□□□ -1.11
SRP54-206ENST00000555317 LCE2BO14633 110 aa8.13□□□□□ -1.11
SRP54-206ENST00000555317 CRPP02741 224 aa8.13□□□□□ -1.11
SRP54-206ENST00000555317 CLLU1Q5K131 121 aa8.13□□□□□ -1.11
SRP54-206ENST00000555317 KLK12Q9UKR0 248 aa8.13□□□□□ -1.11
SRP54-206ENST00000555317 COX11Q9Y6N1 276 aa8.13□□□□□ -1.11
SRP54-206ENST00000555317 A0A087WTM6 91 aa8.12□□□□□ -1.11
SRP54-206ENST00000555317 UBE2L6O14933 153 aa8.12□□□□□ -1.11
SRP54-206ENST00000555317 COTL1Q14019 142 aa8.12□□□□□ -1.11
SRP54-206ENST00000555317 GATD1Q8NB37 220 aa8.12□□□□□ -1.11
SRP54-206ENST00000555317 NUP35Q8NFH5 326 aa8.12□□□□□ -1.11
SRP54-206ENST00000555317 UBE2WQ96B02 151 aa8.12□□□□□ -1.11
SRP54-206ENST00000555317 ANGP03950 147 aaKnown RBP8.11□□□□□ -1.11
SRP54-206ENST00000555317 AMTP48728 403 aa8.11□□□□□ -1.11
SRP54-206ENST00000555317 Q0VG73 95 aa8.11□□□□□ -1.11
SRP54-206ENST00000555317 GAGE6Q13070 117 aa8.11□□□□□ -1.11
SRP54-206ENST00000555317 IQCJQ1A5X6 159 aa8.11□□□□□ -1.11
SRP54-206ENST00000555317 MPV17L2Q567V2 206 aa8.11□□□□□ -1.11
SRP54-206ENST00000555317 CDPF1Q6NVV7 123 aa8.11□□□□□ -1.11
SRP54-206ENST00000555317 TMEM243Q9BU79 118 aa8.11□□□□□ -1.11
SRP54-206ENST00000555317 TMEM191AQ9H0A3 160 aa8.11□□□□□ -1.11
SRP54-206ENST00000555317 IGKV2D-24A0A075B6R9 120 aa8.1□□□□□ -1.11
SRP54-206ENST00000555317 SMIM27A0A1W2PRY6 76 aa8.1□□□□□ -1.11
SRP54-206ENST00000555317 PPP1R2P9O14990 202 aa8.1□□□□□ -1.11
SRP54-206ENST00000555317 KRTAP10-2P60368 255 aa8.1□□□□□ -1.11
SRP54-206ENST00000555317 PNRC1Q12796 327 aaPredicted RBP8.1□□□□□ -1.11
SRP54-206ENST00000555317 NTM-AS1Q6ZSK4 140 aa8.1□□□□□ -1.11
SRP54-206ENST00000555317 RPL39LQ96EH5 51 aaKnown RBP8.1□□□□□ -1.11
SRP54-206ENST00000555317 PGPEP1Q9NXJ5 209 aa8.1□□□□□ -1.11
SRP54-206ENST00000555317 A0A1B0GW15 77 aa8.09□□□□□ -1.11
SRP54-206ENST00000555317 S100A8P05109 93 aa8.09□□□□□ -1.11
SRP54-206ENST00000555317 ATRAIDQ6UW56 229 aa8.09□□□□□ -1.11
SRP54-206ENST00000555317 MRAP2Q96G30 205 aa8.09□□□□□ -1.11
SRP54-206ENST00000555317 C1orf43Q9BWL3 253 aa8.09□□□□□ -1.11
SRP54-206ENST00000555317 DNAH11Q96DT5 4516 aa8.09□□□□□ -1.11
SRP54-206ENST00000555317 SDHAF1A6NFY7 115 aa8.08□□□□□ -1.12
SRP54-206ENST00000555317 PPP1R17O96001 155 aa8.08□□□□□ -1.12
SRP54-206ENST00000555317 APCSP02743 223 aa8.08□□□□□ -1.12
SRP54-206ENST00000555317 CAMPP49913 170 aa8.08□□□□□ -1.12
SRP54-206ENST00000555317 RBX1P62877 108 aa8.08□□□□□ -1.12
SRP54-206ENST00000555317 AMN1Q8IY45 258 aa8.08□□□□□ -1.12
SRP54-206ENST00000555317 Q8N976 141 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms