RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 Q8N814 137 aa14.34□□□□□ -0.11
SYNE2-218ENST00000555241 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.34□□□□□ -0.11
SYNE2-218ENST00000555241 A0A087WX48 190 aa14.33□□□□□ -0.12
SYNE2-218ENST00000555241 TRBV6-8A0A0A6YYG3 113 aa14.33□□□□□ -0.12
SYNE2-218ENST00000555241 F2Z2F3 143 aa14.33□□□□□ -0.12
SYNE2-218ENST00000555241 KRTAP10-1P60331 282 aa14.33□□□□□ -0.12
SYNE2-218ENST00000555241 KCNIP4Q6PIL6 250 aa14.33□□□□□ -0.12
SYNE2-218ENST00000555241 COX11Q9Y6N1 276 aa14.33□□□□□ -0.12
SYNE2-218ENST00000555241 GCSHP23434 173 aa14.32□□□□□ -0.12
SYNE2-218ENST00000555241 ELOBQ15370 118 aa14.32□□□□□ -0.12
SYNE2-218ENST00000555241 LYPD6BQ8NI32 183 aa14.32□□□□□ -0.12
SYNE2-218ENST00000555241 IGLV5-52A0A0A0MRZ9 124 aa14.31□□□□□ -0.12
SYNE2-218ENST00000555241 NUDT10Q8NFP7 164 aa14.31□□□□□ -0.12
SYNE2-218ENST00000555241 RMI2Q96E14 147 aa14.31□□□□□ -0.12
SYNE2-218ENST00000555241 NUDT11Q96G61 164 aa14.31□□□□□ -0.12
SYNE2-218ENST00000555241 KLK12Q9UKR0 248 aa14.31□□□□□ -0.12
SYNE2-218ENST00000555241 TMEM250H0YL14 139 aa14.3□□□□□ -0.12
SYNE2-218ENST00000555241 TMEM97Q5BJF2 176 aa14.3□□□□□ -0.12
SYNE2-218ENST00000555241 H7C1H1 209 aa14.29□□□□□ -0.12
SYNE2-218ENST00000555241 MGPP08493 103 aa14.29□□□□□ -0.12
SYNE2-218ENST00000555241 TRGC1P0CF51 173 aa14.29□□□□□ -0.12
SYNE2-218ENST00000555241 LYZL1Q6UWQ5 148 aa14.29□□□□□ -0.12
SYNE2-218ENST00000555241 OCC1Q8TAD7 63 aa14.29□□□□□ -0.12
SYNE2-218ENST00000555241 K7EN84 100 aa14.28□□□□□ -0.12
SYNE2-218ENST00000555241 CTRLP40313 264 aa14.28□□□□□ -0.12
SYNE2-218ENST00000555241 XGP55808 180 aa14.28□□□□□ -0.12
SYNE2-218ENST00000555241 DNAJC30Q96LL9 226 aa14.28□□□□□ -0.12
SYNE2-218ENST00000555241 RPP21Q9H633 154 aaKnown RBP14.28□□□□□ -0.12
SYNE2-218ENST00000555241 TMEM262E9PQX1 116 aa14.27□□□□□ -0.13
SYNE2-218ENST00000555241 M0QY20 66 aa14.27□□□□□ -0.13
SYNE2-218ENST00000555241 PKIAP61925 76 aa14.27□□□□□ -0.13
SYNE2-218ENST00000555241 WFDC2Q14508 124 aa14.27□□□□□ -0.13
SYNE2-218ENST00000555241 WDR73Q6P4I2 378 aa14.27□□□□□ -0.13
SYNE2-218ENST00000555241 UBE2WQ96B02 151 aa14.27□□□□□ -0.13
SYNE2-218ENST00000555241 RNASE7Q9H1E1 156 aaKnown RBP14.27□□□□□ -0.13
SYNE2-218ENST00000555241 IGKV2D-24A0A075B6R9 120 aa14.26□□□□□ -0.13
SYNE2-218ENST00000555241 NTF3P20783 257 aa14.26□□□□□ -0.13
SYNE2-218ENST00000555241 NKX2-5P52952 324 aaPredicted RBP14.26□□□□□ -0.13
SYNE2-218ENST00000555241 SUMO4Q6EEV6 95 aa14.26□□□□□ -0.13
SYNE2-218ENST00000555241 CNFNQ9BYD5 112 aa14.26□□□□□ -0.13
SYNE2-218ENST00000555241 DPH3P1Q9H4G8 78 aa14.26□□□□□ -0.13
SYNE2-218ENST00000555241 Q0VG73 95 aa14.25□□□□□ -0.13
SYNE2-218ENST00000555241 ATRAIDQ6UW56 229 aa14.25□□□□□ -0.13
SYNE2-218ENST00000555241 NTM-AS1Q6ZSK4 140 aa14.25□□□□□ -0.13
SYNE2-218ENST00000555241 CHCHD5Q9BSY4 110 aa14.25□□□□□ -0.13
SYNE2-218ENST00000555241 A0A1B0GVG6 124 aa14.24□□□□□ -0.13
SYNE2-218ENST00000555241 MPV17L2Q567V2 206 aa14.24□□□□□ -0.13
SYNE2-218ENST00000555241 TRBV25-1A0A075B6N4 114 aa14.23□□□□□ -0.13
SYNE2-218ENST00000555241 NDUFS6O75380 124 aaKnown RBP14.23□□□□□ -0.13
SYNE2-218ENST00000555241 RASL11AQ6T310 242 aa14.23□□□□□ -0.13
SYNE2-218ENST00000555241 BAALCQ8WXS3 180 aa14.23□□□□□ -0.13
SYNE2-218ENST00000555241 LECT2O14960 151 aa14.22□□□□□ -0.13
SYNE2-218ENST00000555241 CRPP02741 224 aa14.22□□□□□ -0.13
SYNE2-218ENST00000555241 FAM231DQ6ZW35 169 aa14.22□□□□□ -0.13
SYNE2-218ENST00000555241 TMEM70Q9BUB7 260 aa14.22□□□□□ -0.13
SYNE2-218ENST00000555241 TWIST1Q15672 202 aa14.21□□□□□ -0.13
SYNE2-218ENST00000555241 IQCJQ1A5X6 159 aa14.21□□□□□ -0.13
SYNE2-218ENST00000555241 C15orf54Q8N8G6 183 aa14.21□□□□□ -0.13
SYNE2-218ENST00000555241 EIF5A2Q9GZV4 153 aaKnown RBP14.21□□□□□ -0.13
SYNE2-218ENST00000555241 DNAH8Q96JB1 4490 aa14.21□□□□□ -0.14
SYNE2-218ENST00000555241 ANGP03950 147 aaKnown RBP14.2□□□□□ -0.14
SYNE2-218ENST00000555241 CEBPGP53567 150 aa14.2□□□□□ -0.14
SYNE2-218ENST00000555241 ENHOQ6UWT2 76 aa14.2□□□□□ -0.14
SYNE2-218ENST00000555241 GTSF1Q8WW33 167 aa14.2□□□□□ -0.14
SYNE2-218ENST00000555241 FAM210AQ96ND0 272 aa14.2□□□□□ -0.14
SYNE2-218ENST00000555241 C1orf43Q9BWL3 253 aa14.2□□□□□ -0.14
SYNE2-218ENST00000555241 NIT2Q9NQR4 276 aa14.2□□□□□ -0.14
SYNE2-218ENST00000555241 FAT1Q14517 4588 aa14.2□□□□□ -0.14
SYNE2-218ENST00000555241 IGHV1-24A0A0C4DH33 117 aa14.19□□□□□ -0.14
SYNE2-218ENST00000555241 EPM2AB3EWF7 344 aa14.19□□□□□ -0.14
SYNE2-218ENST00000555241 GATCO43716 136 aaKnown RBP14.19□□□□□ -0.14
SYNE2-218ENST00000555241 Q8N976 141 aa14.19□□□□□ -0.14
SYNE2-218ENST00000555241 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.18□□□□□ -0.14
SYNE2-218ENST00000555241 SMIM7Q9BQ49 75 aa14.18□□□□□ -0.14
SYNE2-218ENST00000555241 A8MWL6 223 aa14.17□□□□□ -0.14
SYNE2-218ENST00000555241 RBX1P62877 108 aa14.17□□□□□ -0.14
SYNE2-218ENST00000555241 GAGE6Q13070 117 aa14.17□□□□□ -0.14
SYNE2-218ENST00000555241 MIAQ16674 131 aa14.17□□□□□ -0.14
SYNE2-218ENST00000555241 CT83Q5H943 113 aa14.17□□□□□ -0.14
SYNE2-218ENST00000555241 FRZBQ92765 325 aa14.17□□□□□ -0.14
SYNE2-218ENST00000555241 PGLYRP4Q96LB8 373 aa14.17□□□□□ -0.14
SYNE2-218ENST00000555241 SMIM15Q7Z3B0 74 aa14.15□□□□□ -0.14
SYNE2-218ENST00000555241 LINC01551Q86U37 167 aa14.15□□□□□ -0.14
SYNE2-218ENST00000555241 PRR34Q9NV39 138 aa14.15□□□□□ -0.14
SYNE2-218ENST00000555241 ZNF727A8MUV8 499 aa14.14□□□□□ -0.15
SYNE2-218ENST00000555241 SRP19P09132 144 aaKnown RBP14.14□□□□□ -0.15
SYNE2-218ENST00000555241 FOXA3P55318 350 aaPredicted RBP14.14□□□□□ -0.15
SYNE2-218ENST00000555241 TMEM243Q9BU79 118 aa14.14□□□□□ -0.15
SYNE2-218ENST00000555241 C14orf177Q52M58 125 aa14.13□□□□□ -0.15
SYNE2-218ENST00000555241 Q5VSD8 79 aa14.13□□□□□ -0.15
SYNE2-218ENST00000555241 GATD1Q8NB37 220 aa14.13□□□□□ -0.15
SYNE2-218ENST00000555241 FAM30AQ9NZY2 134 aa14.13□□□□□ -0.15
SYNE2-218ENST00000555241 HAMPP81172 84 aa14.12□□□□□ -0.15
SYNE2-218ENST00000555241 LINC00269Q8N2A0 174 aa14.12□□□□□ -0.15
SYNE2-218ENST00000555241 VPS13BQ7Z7G8 4022 aa14.12□□□□□ -0.15
SYNE2-218ENST00000555241 TRAV26-2A0A0B4J265 109 aa14.11□□□□□ -0.15
SYNE2-218ENST00000555241 A0A1B0GUV1 79 aa14.11□□□□□ -0.15
SYNE2-218ENST00000555241 COTL1Q14019 142 aa14.11□□□□□ -0.15
SYNE2-218ENST00000555241 TEX261Q6UWH6 196 aa14.11□□□□□ -0.15
SYNE2-218ENST00000555241 Q6ZSA8 131 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms