RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 A0A087WWL8 130 aa7.66□□□□□ -1.18
SHMT2-218ENST00000555213 TRAV26-2A0A0B4J265 109 aa7.66□□□□□ -1.18
SHMT2-218ENST00000555213 D6R8Y8 96 aa7.66□□□□□ -1.18
SHMT2-218ENST00000555213 RHODO00212 210 aa7.66□□□□□ -1.18
SHMT2-218ENST00000555213 RS1O15537 224 aa7.66□□□□□ -1.18
SHMT2-218ENST00000555213 OR10J3Q5JRS4 329 aa7.66□□□□□ -1.18
SHMT2-218ENST00000555213 Q6ZSN1 163 aa7.66□□□□□ -1.18
SHMT2-218ENST00000555213 DPH3P1Q9H4G8 78 aa7.66□□□□□ -1.18
SHMT2-218ENST00000555213 PRO0255Q9UI72 69 aa7.66□□□□□ -1.18
SHMT2-218ENST00000555213 PRSS47A8MTI9 375 aa7.65□□□□□ -1.18
SHMT2-218ENST00000555213 H3BNG1 76 aa7.65□□□□□ -1.18
SHMT2-218ENST00000555213 PAX4O43316 350 aa7.65□□□□□ -1.18
SHMT2-218ENST00000555213 NCR2O95944 276 aa7.65□□□□□ -1.18
SHMT2-218ENST00000555213 NPYP01303 97 aa7.65□□□□□ -1.18
SHMT2-218ENST00000555213 CFAP126Q5VTH2 177 aa7.65□□□□□ -1.18
SHMT2-218ENST00000555213 ZNF479Q96JC4 524 aa7.65□□□□□ -1.18
SHMT2-218ENST00000555213 AP1S3Q96PC3 154 aa7.65□□□□□ -1.18
SHMT2-218ENST00000555213 A0A0J9YY99 117 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 NUDT3O95989 172 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 SMIM17P0DL12 118 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 ESDP10768 282 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 CKS2P33552 79 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 FAM74A4Q5TZK3 123 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 ZFP2Q6ZN57 461 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 NIT1Q86X76 327 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 ORMDL3Q8N138 153 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 HIST3H2BBQ8N257 126 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 PRELID3AQ96N28 172 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 Q9UF83 564 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 APLNQ9ULZ1 77 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 HHLA3Q9XRX5 114 aa7.64□□□□□ -1.19
SHMT2-218ENST00000555213 IGLV2-18A0A075B6J9 118 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 M0QY20 66 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 TNFRSF6BO95407 300 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 PPBPP02775 128 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 P0DMU3 169 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 FAM231AP0DMU4 169 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 FAM231CP0DMU5 169 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 CRYBA4P53673 196 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 FHL2Q14192 279 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 SUMO4Q6EEV6 95 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 SMIM15Q7Z3B0 74 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 MRAP2Q96G30 205 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 PRADC1Q9BSG0 188 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 ICOSQ9Y6W8 199 aa7.63□□□□□ -1.19
SHMT2-218ENST00000555213 IGHV3-73A0A0B4J1V6 119 aa7.62□□□□□ -1.19
SHMT2-218ENST00000555213 SERF1AO75920 110 aa7.62□□□□□ -1.19
SHMT2-218ENST00000555213 RHOHQ15669 191 aa7.62□□□□□ -1.19
SHMT2-218ENST00000555213 UBE2DNLQ8IWF7 75 aa7.62□□□□□ -1.19
SHMT2-218ENST00000555213 RPL39LQ96EH5 51 aaKnown RBP7.62□□□□□ -1.19
SHMT2-218ENST00000555213 LCE6AA0A183 80 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 TRBV6-4A0A1B0GX49 114 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 LINC01546A6NGU7 62 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 LY6G6CO95867 125 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 S100A6P06703 90 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 MGPP08493 103 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 IFI27P40305 119 aaPredicted RBP7.61□□□□□ -1.19
SHMT2-218ENST00000555213 ZNF56Q15929 161 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 MRPL23Q16540 153 aaKnown RBP7.61□□□□□ -1.19
SHMT2-218ENST00000555213 LGALS9CQ6DKI2 356 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 BAGE3Q86Y29 109 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 LINC00476Q8WZB0 136 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 VSIG2Q96IQ7 327 aa7.61□□□□□ -1.19
SHMT2-218ENST00000555213 LOC389332A0A1B0GUA5 103 aa7.6□□□□□ -1.19
SHMT2-218ENST00000555213 K7EQD1 137 aa7.6□□□□□ -1.19
SHMT2-218ENST00000555213 LINC00614P0C842 121 aa7.6□□□□□ -1.19
SHMT2-218ENST00000555213 GYPEP15421 78 aa7.6□□□□□ -1.19
SHMT2-218ENST00000555213 POLR2KP53803 58 aaKnown RBP7.6□□□□□ -1.19
SHMT2-218ENST00000555213 CCL18P55774 89 aa7.6□□□□□ -1.19
SHMT2-218ENST00000555213 SH2D6Q7Z4S9 175 aa7.6□□□□□ -1.19
SHMT2-218ENST00000555213 LAMTOR2Q9Y2Q5 125 aa7.6□□□□□ -1.19
SHMT2-218ENST00000555213 DNAH7Q8WXX0 4024 aa7.6□□□□□ -1.19
SHMT2-218ENST00000555213 TRBV6-5A0A0K0K1A5 114 aa7.59□□□□□ -1.19
SHMT2-218ENST00000555213 F5H697 171 aa7.59□□□□□ -1.19
SHMT2-218ENST00000555213 PDZD11Q5EBL8 140 aa7.59□□□□□ -1.19
SHMT2-218ENST00000555213 SLC25A29Q8N8R3 303 aa7.59□□□□□ -1.19
SHMT2-218ENST00000555213 HIST1H2BLQ99880 126 aa7.59□□□□□ -1.19
SHMT2-218ENST00000555213 C20orf78Q9BR46 151 aa7.59□□□□□ -1.19
SHMT2-218ENST00000555213 A0A096LNJ9 63 aa7.58□□□□□ -1.2
SHMT2-218ENST00000555213 A0A096LPF7 62 aa7.58□□□□□ -1.2
SHMT2-218ENST00000555213 NEGR1Q7Z3B1 354 aa7.58□□□□□ -1.2
SHMT2-218ENST00000555213 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
SHMT2-218ENST00000555213 Q8N8P6 123 aa7.58□□□□□ -1.2
SHMT2-218ENST00000555213 CHCHD1Q96BP2 118 aaKnown RBP7.58□□□□□ -1.2
SHMT2-218ENST00000555213 TENM2Q9NT68 2774 aa7.58□□□□□ -1.2
SHMT2-218ENST00000555213 BIRC6Q9NR09 4857 aa7.57□□□□□ -1.2
SHMT2-218ENST00000555213 TRBV10-1A0A0K0K1A3 114 aa7.57□□□□□ -1.2
SHMT2-218ENST00000555213 H7C1H1 209 aa7.57□□□□□ -1.2
SHMT2-218ENST00000555213 SUMO2P61956 95 aaKnown RBP7.57□□□□□ -1.2
SHMT2-218ENST00000555213 RPL32P62910 135 aaKnown RBP7.57□□□□□ -1.2
SHMT2-218ENST00000555213 PRSS3P2Q8NHM4 247 aa7.57□□□□□ -1.2
SHMT2-218ENST00000555213 NIT2Q9NQR4 276 aa7.57□□□□□ -1.2
SHMT2-218ENST00000555213 EPPK1P58107 5090 aaKnown RBP7.57□□□□□ -1.2
SHMT2-218ENST00000555213 NEXN-AS1Q8NBZ9 246 aa7.56□□□□□ -1.2
SHMT2-218ENST00000555213 PACRGQ96M98 296 aaPredicted RBP7.56□□□□□ -1.2
SHMT2-218ENST00000555213 TMEM70Q9BUB7 260 aa7.56□□□□□ -1.2
SHMT2-218ENST00000555213 MAP1LC3AQ9H492 121 aa7.56□□□□□ -1.2
SHMT2-218ENST00000555213 TRBV27A0A0K0K1C4 114 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 LOC100131303A0A0U1RQF7 123 aa7.55□□□□□ -1.2
SHMT2-218ENST00000555213 GAGE12JA6NER3 117 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms