RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 LOC100131303A0A0U1RQF7 123 aa7.09□□□□□ -1.27
SYNE2-215ENST00000554997 NUDT3O95989 172 aa7.09□□□□□ -1.27
SYNE2-215ENST00000554997 PPP1R17O96001 155 aa7.09□□□□□ -1.27
SYNE2-215ENST00000554997 PPBPP02775 128 aa7.09□□□□□ -1.27
SYNE2-215ENST00000554997 P0DMU3 169 aa7.09□□□□□ -1.27
SYNE2-215ENST00000554997 FAM231AP0DMU4 169 aa7.09□□□□□ -1.27
SYNE2-215ENST00000554997 FAM231CP0DMU5 169 aa7.09□□□□□ -1.27
SYNE2-215ENST00000554997 RPL36AP83881 106 aaKnown RBP7.09□□□□□ -1.27
SYNE2-215ENST00000554997 ZNRF2Q8NHG8 242 aa7.09□□□□□ -1.27
SYNE2-215ENST00000554997 RPL36ALQ969Q0 106 aaKnown RBP7.09□□□□□ -1.27
SYNE2-215ENST00000554997 TNFRSF18Q9Y5U5 241 aa7.09□□□□□ -1.27
SYNE2-215ENST00000554997 KMT2CQ8NEZ4 4911 aaKnown RBP7.09□□□□□ -1.28
SYNE2-215ENST00000554997 GAGE12JA6NER3 117 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 COLCA2A8K830 154 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 HLA-DQA1P01909 254 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 APCSP02743 223 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 MT-ND6P03923 174 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 SRIP30626 198 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 CKS2P33552 79 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 GAGE1Q13065 139 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 GAGE4Q13068 117 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 GAGE5Q13069 117 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 GAGE13Q4V321 117 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 NEGR1Q7Z3B1 354 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 NEXN-AS1Q8NBZ9 246 aa7.08□□□□□ -1.28
SYNE2-215ENST00000554997 DNAH7Q8WXX0 4024 aa7.07□□□□□ -1.28
SYNE2-215ENST00000554997 TRBV6-5A0A0K0K1A5 114 aa7.07□□□□□ -1.28
SYNE2-215ENST00000554997 SCO1O75880 301 aa7.07□□□□□ -1.28
SYNE2-215ENST00000554997 GAS8-AS1O95177 125 aa7.07□□□□□ -1.28
SYNE2-215ENST00000554997 LINC00694P0DN24 101 aa7.07□□□□□ -1.28
SYNE2-215ENST00000554997 UBE2D3P61077 147 aa7.07□□□□□ -1.28
SYNE2-215ENST00000554997 UBE2D2P62837 147 aa7.07□□□□□ -1.28
SYNE2-215ENST00000554997 LYPD5Q6UWN5 251 aa7.07□□□□□ -1.28
SYNE2-215ENST00000554997 ATP6V0E2Q8NHE4 81 aa7.07□□□□□ -1.28
SYNE2-215ENST00000554997 SMKR1H3BMG3 65 aa7.06□□□□□ -1.28
SYNE2-215ENST00000554997 PHOX2AO14813 284 aa7.06□□□□□ -1.28
SYNE2-215ENST00000554997 ESRGQ1W209 222 aa7.06□□□□□ -1.28
SYNE2-215ENST00000554997 OR10J3Q5JRS4 329 aa7.06□□□□□ -1.28
SYNE2-215ENST00000554997 DAZ4Q86SG3 579 aaKnown RBP7.06□□□□□ -1.28
SYNE2-215ENST00000554997 ORMDL3Q8N138 153 aa7.06□□□□□ -1.28
SYNE2-215ENST00000554997 NRACQ8N912 160 aa7.06□□□□□ -1.28
SYNE2-215ENST00000554997 DAZ3Q9NR90 486 aaKnown RBP7.06□□□□□ -1.28
SYNE2-215ENST00000554997 TRAPPC1Q9Y5R8 145 aa7.06□□□□□ -1.28
SYNE2-215ENST00000554997 D6R8Y8 96 aa7.05□□□□□ -1.28
SYNE2-215ENST00000554997 RPS10P46783 165 aaKnown RBP7.05□□□□□ -1.28
SYNE2-215ENST00000554997 TIRAPP58753 221 aa7.05□□□□□ -1.28
SYNE2-215ENST00000554997 FABP9Q0Z7S8 132 aa7.05□□□□□ -1.28
SYNE2-215ENST00000554997 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-215ENST00000554997 RPL39LQ96EH5 51 aaKnown RBP7.05□□□□□ -1.28
SYNE2-215ENST00000554997 C20orf78Q9BR46 151 aa7.05□□□□□ -1.28
SYNE2-215ENST00000554997 MRPL18Q9H0U6 180 aaKnown RBP7.05□□□□□ -1.28
SYNE2-215ENST00000554997 GTSF1LQ9H1H1 148 aa7.05□□□□□ -1.28
SYNE2-215ENST00000554997 ST20Q9HBF5 79 aa7.05□□□□□ -1.28
SYNE2-215ENST00000554997 LAMTOR2Q9Y2Q5 125 aa7.05□□□□□ -1.28
SYNE2-215ENST00000554997 NACAE9PAV3 2078 aa7.05□□□□□ -1.28
SYNE2-215ENST00000554997 STARD9Q9P2P6 4700 aa7.04□□□□□ -1.28
SYNE2-215ENST00000554997 CSMD3Q7Z407 3707 aa7.04□□□□□ -1.28
SYNE2-215ENST00000554997 PRSS47A8MTI9 375 aa7.04□□□□□ -1.28
SYNE2-215ENST00000554997 VCYO14598 125 aa7.04□□□□□ -1.28
SYNE2-215ENST00000554997 TNFRSF6BO95407 300 aa7.04□□□□□ -1.28
SYNE2-215ENST00000554997 NCR2O95944 276 aa7.04□□□□□ -1.28
SYNE2-215ENST00000554997 POLR2KP53803 58 aaKnown RBP7.04□□□□□ -1.28
SYNE2-215ENST00000554997 CCL18P55774 89 aa7.04□□□□□ -1.28
SYNE2-215ENST00000554997 KIAA1644Q3SXP7 199 aa7.04□□□□□ -1.28
SYNE2-215ENST00000554997 PRELID3AQ96N28 172 aa7.04□□□□□ -1.28
SYNE2-215ENST00000554997 SACSQ9NZJ4 4579 aa7.04□□□□□ -1.28
SYNE2-215ENST00000554997 SDHAF1A6NFY7 115 aa7.03□□□□□ -1.28
SYNE2-215ENST00000554997 I3L3M4 83 aa7.03□□□□□ -1.28
SYNE2-215ENST00000554997 RAB5AP20339 215 aa7.03□□□□□ -1.28
SYNE2-215ENST00000554997 SUMO2P61956 95 aaKnown RBP7.03□□□□□ -1.28
SYNE2-215ENST00000554997 RPL32P62910 135 aaKnown RBP7.03□□□□□ -1.28
SYNE2-215ENST00000554997 TMEM97Q5BJF2 176 aa7.03□□□□□ -1.28
SYNE2-215ENST00000554997 ALKBH7Q9BT30 221 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-215ENST00000554997 TMEM70Q9BUB7 260 aa7.03□□□□□ -1.28
SYNE2-215ENST00000554997 LINC00588Q9Y4M8 146 aa7.03□□□□□ -1.28
SYNE2-215ENST00000554997 DYNC2H1Q8NCM8 4307 aaKnown RBP7.02□□□□□ -1.29
SYNE2-215ENST00000554997 IGHV3-38A0A0C4DH36 116 aa7.02□□□□□ -1.29
SYNE2-215ENST00000554997 TRBV27A0A0K0K1C4 114 aa7.02□□□□□ -1.29
SYNE2-215ENST00000554997 NPYP01303 97 aa7.02□□□□□ -1.29
SYNE2-215ENST00000554997 PMCHP20382 165 aa7.02□□□□□ -1.29
SYNE2-215ENST00000554997 LGALS9CQ6DKI2 356 aa7.02□□□□□ -1.29
SYNE2-215ENST00000554997 RYR3Q15413 4870 aa7.02□□□□□ -1.29
SYNE2-215ENST00000554997 TRBV6-8A0A0A6YYG3 113 aa7.01□□□□□ -1.29
SYNE2-215ENST00000554997 J3QL48 77 aa7.01□□□□□ -1.29
SYNE2-215ENST00000554997 LELP1Q5T871 98 aa7.01□□□□□ -1.29
SYNE2-215ENST00000554997 NTM-AS1Q6ZSK4 140 aa7.01□□□□□ -1.29
SYNE2-215ENST00000554997 MRPS16Q9Y3D3 137 aaKnown RBP7.01□□□□□ -1.29
SYNE2-215ENST00000554997 PLECQ15149 4684 aaKnown RBP7.01□□□□□ -1.29
SYNE2-215ENST00000554997 TRAV8-6A0A0B4J262 113 aa7□□□□□ -1.29
SYNE2-215ENST00000554997 TRGC2P03986 189 aa7□□□□□ -1.29
SYNE2-215ENST00000554997 COTL1Q14019 142 aa7□□□□□ -1.29
SYNE2-215ENST00000554997 KIR2DL4Q99706 377 aa7□□□□□ -1.29
SYNE2-215ENST00000554997 UPK3BQ9BT76 320 aa7□□□□□ -1.29
SYNE2-215ENST00000554997 MAP1LC3AQ9H492 121 aa7□□□□□ -1.29
SYNE2-215ENST00000554997 TENM2Q9NT68 2774 aa6.99□□□□□ -1.29
SYNE2-215ENST00000554997 IGLV2-18A0A075B6J9 118 aa6.99□□□□□ -1.29
SYNE2-215ENST00000554997 LOC389332A0A1B0GUA5 103 aa6.99□□□□□ -1.29
SYNE2-215ENST00000554997 TCAPO15273 167 aa6.99□□□□□ -1.29
SYNE2-215ENST00000554997 IQCJQ1A5X6 159 aa6.99□□□□□ -1.29
SYNE2-215ENST00000554997 UBE2DNLQ8IWF7 75 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms