RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PPP1R17O96001 155 aa11.42□□□□□ -0.58
SPTLC2-203ENST00000554901 NEXN-AS1Q8NBZ9 246 aa11.42□□□□□ -0.58
SPTLC2-203ENST00000554901 GNB1LQ9BYB4 327 aa11.42□□□□□ -0.58
SPTLC2-203ENST00000554901 HLA-DQA1P01909 254 aa11.41□□□□□ -0.58
SPTLC2-203ENST00000554901 PPBPP02775 128 aa11.41□□□□□ -0.58
SPTLC2-203ENST00000554901 MT-ND6P03923 174 aa11.41□□□□□ -0.58
SPTLC2-203ENST00000554901 STARD9Q9P2P6 4700 aa11.41□□□□□ -0.58
SPTLC2-203ENST00000554901 GAGE12JA6NER3 117 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 P0DMU3 169 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 FAM231AP0DMU4 169 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 FAM231CP0DMU5 169 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 GAGE1Q13065 139 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 GAGE4Q13068 117 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 GAGE5Q13069 117 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 MRPL51Q4U2R6 128 aaKnown RBP11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 GAGE13Q4V321 117 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 TMEM136Q6ZRR5 245 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 ZNRF2Q8NHG8 242 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 YPEL4Q96NS1 127 aa11.4□□□□□ -0.58
SPTLC2-203ENST00000554901 TRAV26-2A0A0B4J265 109 aa11.4□□□□□ -0.59
SPTLC2-203ENST00000554901 TIRAPP58753 221 aa11.4□□□□□ -0.59
SPTLC2-203ENST00000554901 UBE2D3P61077 147 aa11.4□□□□□ -0.59
SPTLC2-203ENST00000554901 UBE2D2P62837 147 aa11.4□□□□□ -0.59
SPTLC2-203ENST00000554901 CBLN2Q8IUK8 224 aa11.4□□□□□ -0.59
SPTLC2-203ENST00000554901 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.4□□□□□ -0.59
SPTLC2-203ENST00000554901 ATP6V0E2Q8NHE4 81 aa11.4□□□□□ -0.59
SPTLC2-203ENST00000554901 Q9UF83 564 aa11.4□□□□□ -0.59
SPTLC2-203ENST00000554901 TNFRSF18Q9Y5U5 241 aa11.4□□□□□ -0.59
SPTLC2-203ENST00000554901 TGIF2-C20orf24A0A0A6YYL0 155 aa11.39□□□□□ -0.59
SPTLC2-203ENST00000554901 TRBV6-5A0A0K0K1A5 114 aa11.39□□□□□ -0.59
SPTLC2-203ENST00000554901 CCL18P55774 89 aa11.39□□□□□ -0.59
SPTLC2-203ENST00000554901 CKS2P33552 79 aa11.38□□□□□ -0.59
SPTLC2-203ENST00000554901 DAZ4Q86SG3 579 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-203ENST00000554901 DAZ3Q9NR90 486 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-203ENST00000554901 PHOX2AO14813 284 aa11.37□□□□□ -0.59
SPTLC2-203ENST00000554901 OR10J3Q5JRS4 329 aa11.37□□□□□ -0.59
SPTLC2-203ENST00000554901 LGALS9CQ6DKI2 356 aa11.37□□□□□ -0.59
SPTLC2-203ENST00000554901 ORMDL3Q8N138 153 aa11.37□□□□□ -0.59
SPTLC2-203ENST00000554901 GTSF1LQ9H1H1 148 aa11.37□□□□□ -0.59
SPTLC2-203ENST00000554901 LAMTOR2Q9Y2Q5 125 aa11.37□□□□□ -0.59
SPTLC2-203ENST00000554901 TMEM97Q5BJF2 176 aa11.36□□□□□ -0.59
SPTLC2-203ENST00000554901 LYPD5Q6UWN5 251 aa11.36□□□□□ -0.59
SPTLC2-203ENST00000554901 TMA7Q9Y2S6 64 aaKnown RBP11.36□□□□□ -0.59
SPTLC2-203ENST00000554901 D6R8Y8 96 aa11.35□□□□□ -0.59
SPTLC2-203ENST00000554901 APCSP02743 223 aa11.35□□□□□ -0.59
SPTLC2-203ENST00000554901 ESRGQ1W209 222 aa11.35□□□□□ -0.59
SPTLC2-203ENST00000554901 NRACQ8N912 160 aa11.35□□□□□ -0.59
SPTLC2-203ENST00000554901 RPL39LQ96EH5 51 aaKnown RBP11.35□□□□□ -0.59
SPTLC2-203ENST00000554901 C20orf78Q9BR46 151 aa11.35□□□□□ -0.59
SPTLC2-203ENST00000554901 ST20Q9HBF5 79 aa11.35□□□□□ -0.59
SPTLC2-203ENST00000554901 NCR2O95944 276 aa11.35□□□□□ -0.59
SPTLC2-203ENST00000554901 RPS10P46783 165 aaKnown RBP11.35□□□□□ -0.59
SPTLC2-203ENST00000554901 PLECQ15149 4684 aaKnown RBP11.34□□□□□ -0.59
SPTLC2-203ENST00000554901 SDHAF1A6NFY7 115 aa11.34□□□□□ -0.59
SPTLC2-203ENST00000554901 SMKR1H3BMG3 65 aa11.34□□□□□ -0.59
SPTLC2-203ENST00000554901 GAS8-AS1O95177 125 aa11.34□□□□□ -0.59
SPTLC2-203ENST00000554901 PRELID3AQ96N28 172 aa11.34□□□□□ -0.59
SPTLC2-203ENST00000554901 UPK3BQ9BT76 320 aa11.34□□□□□ -0.59
SPTLC2-203ENST00000554901 MRPS16Q9Y3D3 137 aaKnown RBP11.34□□□□□ -0.59
SPTLC2-203ENST00000554901 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
SPTLC2-203ENST00000554901 SUMO2P61956 95 aaKnown RBP11.33□□□□□ -0.6
SPTLC2-203ENST00000554901 RPL32P62910 135 aaKnown RBP11.33□□□□□ -0.6
SPTLC2-203ENST00000554901 UBE2DNLQ8IWF7 75 aa11.33□□□□□ -0.6
SPTLC2-203ENST00000554901 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
SPTLC2-203ENST00000554901 LINC00588Q9Y4M8 146 aa11.33□□□□□ -0.6
SPTLC2-203ENST00000554901 TRBV27A0A0K0K1C4 114 aa11.32□□□□□ -0.6
SPTLC2-203ENST00000554901 POLR2KP53803 58 aaKnown RBP11.32□□□□□ -0.6
SPTLC2-203ENST00000554901 LELP1Q5T871 98 aa11.32□□□□□ -0.6
SPTLC2-203ENST00000554901 LINC00476Q8WZB0 136 aa11.32□□□□□ -0.6
SPTLC2-203ENST00000554901 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
SPTLC2-203ENST00000554901 TRAPPC1Q9Y5R8 145 aa11.32□□□□□ -0.6
SPTLC2-203ENST00000554901 FABP9Q0Z7S8 132 aa11.31□□□□□ -0.6
SPTLC2-203ENST00000554901 TRBV6-8A0A0A6YYG3 113 aa11.3□□□□□ -0.6
SPTLC2-203ENST00000554901 COLCA2A8K830 154 aa11.3□□□□□ -0.6
SPTLC2-203ENST00000554901 PRSS47A8MTI9 375 aa11.3□□□□□ -0.6
SPTLC2-203ENST00000554901 I3L3M4 83 aa11.3□□□□□ -0.6
SPTLC2-203ENST00000554901 VCYO14598 125 aa11.3□□□□□ -0.6
SPTLC2-203ENST00000554901 SCO1O75880 301 aa11.3□□□□□ -0.6
SPTLC2-203ENST00000554901 NPYP01303 97 aa11.3□□□□□ -0.6
SPTLC2-203ENST00000554901 COTL1Q14019 142 aa11.3□□□□□ -0.6
SPTLC2-203ENST00000554901 TRAV8-6A0A0B4J262 113 aa11.3□□□□□ -0.6
SPTLC2-203ENST00000554901 IGHV3-38A0A0C4DH36 116 aa11.3□□□□□ -0.6
SPTLC2-203ENST00000554901 TCAPO15273 167 aa11.29□□□□□ -0.6
SPTLC2-203ENST00000554901 PMCHP20382 165 aa11.29□□□□□ -0.6
SPTLC2-203ENST00000554901 IQCJQ1A5X6 159 aa11.28□□□□□ -0.6
SPTLC2-203ENST00000554901 KIAA1644Q3SXP7 199 aa11.28□□□□□ -0.6
SPTLC2-203ENST00000554901 KIR2DL4Q99706 377 aa11.28□□□□□ -0.6
SPTLC2-203ENST00000554901 ALKBH7Q9BT30 221 aaPredicted RBP11.28□□□□□ -0.6
SPTLC2-203ENST00000554901 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
SPTLC2-203ENST00000554901 MAP1LC3AQ9H492 121 aa11.28□□□□□ -0.6
SPTLC2-203ENST00000554901 TRBV25-1A0A075B6N4 114 aa11.27□□□□□ -0.61
SPTLC2-203ENST00000554901 IGHV1-24A0A0C4DH33 117 aa11.27□□□□□ -0.61
SPTLC2-203ENST00000554901 LOC105371267A0A1B0GV96 52 aa11.27□□□□□ -0.61
SPTLC2-203ENST00000554901 LY6G6CO95867 125 aa11.27□□□□□ -0.61
SPTLC2-203ENST00000554901 RAB5AP20339 215 aa11.27□□□□□ -0.61
SPTLC2-203ENST00000554901 NTM-AS1Q6ZSK4 140 aa11.27□□□□□ -0.61
SPTLC2-203ENST00000554901 LCE6AA0A183 80 aa11.26□□□□□ -0.61
SPTLC2-203ENST00000554901 PKIAP61925 76 aa11.26□□□□□ -0.61
SPTLC2-203ENST00000554901 SIVA1O15304 175 aa11.25□□□□□ -0.61
SPTLC2-203ENST00000554901 Q9H8V8 135 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms