RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TNFRSF18Q9Y5U5 241 aa10.14□□□□□ -0.79
SHOX2-206ENST00000554685 MEGF8Q7Z7M0 2845 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST1H2BKO60814 126 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST1H2BJP06899 126 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HTN3P15516 51 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST1H2BOP23527 126 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST1H2BBP33778 126 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 CRYBA4P53673 196 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST1H2BDP58876 126 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 NANOS2P60321 138 aaKnown RBP10.13□□□□□ -0.79
SHOX2-206ENST00000554685 SUMO2P61956 95 aaKnown RBP10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST1H2BCP62807 126 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 RPL32P62910 135 aaKnown RBP10.13□□□□□ -0.79
SHOX2-206ENST00000554685 Q0VG73 95 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST2H2BEQ16778 126 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.13□□□□□ -0.79
SHOX2-206ENST00000554685 Q6ZSN1 163 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 Q6ZTC4 211 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 C18orf32Q8TCD1 76 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST1H2BHQ93079 126 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST1H2BNQ99877 126 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 HIST1H2BMQ99879 126 aa10.13□□□□□ -0.79
SHOX2-206ENST00000554685 TRAV10A0A0B4J240 114 aa10.12□□□□□ -0.79
SHOX2-206ENST00000554685 PRSS47A8MTI9 375 aa10.12□□□□□ -0.79
SHOX2-206ENST00000554685 PAX4O43316 350 aa10.12□□□□□ -0.79
SHOX2-206ENST00000554685 PMCHP20382 165 aa10.12□□□□□ -0.79
SHOX2-206ENST00000554685 HOXA5P20719 270 aa10.12□□□□□ -0.79
SHOX2-206ENST00000554685 NEXN-AS1Q8NBZ9 246 aa10.12□□□□□ -0.79
SHOX2-206ENST00000554685 RPL39LQ96EH5 51 aaKnown RBP10.12□□□□□ -0.79
SHOX2-206ENST00000554685 NXT2Q9NPJ8 142 aaKnown RBP10.12□□□□□ -0.79
SHOX2-206ENST00000554685 TRBV7-3A0A075B6L6 115 aa10.11□□□□□ -0.79
SHOX2-206ENST00000554685 DEFB131BA0A096LNP1 70 aa10.11□□□□□ -0.79
SHOX2-206ENST00000554685 TCAPO15273 167 aa10.11□□□□□ -0.79
SHOX2-206ENST00000554685 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
SHOX2-206ENST00000554685 BAGE3Q86Y29 109 aa10.11□□□□□ -0.79
SHOX2-206ENST00000554685 PRSS3P2Q8NHM4 247 aa10.11□□□□□ -0.79
SHOX2-206ENST00000554685 SMIM2Q9BVW6 85 aa10.11□□□□□ -0.79
SHOX2-206ENST00000554685 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
SHOX2-206ENST00000554685 H3BNG1 76 aa10.1□□□□□ -0.79
SHOX2-206ENST00000554685 VCYO14598 125 aa10.1□□□□□ -0.79
SHOX2-206ENST00000554685 S100A6P06703 90 aa10.1□□□□□ -0.79
SHOX2-206ENST00000554685 P0DMU3 169 aa10.1□□□□□ -0.79
SHOX2-206ENST00000554685 FAM231AP0DMU4 169 aa10.1□□□□□ -0.79
SHOX2-206ENST00000554685 FAM231CP0DMU5 169 aa10.1□□□□□ -0.79
SHOX2-206ENST00000554685 TMEM70Q9BUB7 260 aa10.1□□□□□ -0.79
SHOX2-206ENST00000554685 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
SHOX2-206ENST00000554685 LOC389332A0A1B0GUA5 103 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 K7EMI3 77 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 GYPEP15421 78 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 GAGE1Q13065 139 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 GAGE4Q13068 117 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 GAGE5Q13069 117 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 FA2HQ7L5A8 372 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 Q8N8P6 123 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 ZNRF2Q8NHG8 242 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 KIR2DL4Q99706 377 aa10.09□□□□□ -0.79
SHOX2-206ENST00000554685 TRAV26-1A0A087WT03 109 aa10.08□□□□□ -0.8
SHOX2-206ENST00000554685 TRBV27A0A0K0K1C4 114 aa10.08□□□□□ -0.8
SHOX2-206ENST00000554685 POLR2KP53803 58 aaKnown RBP10.08□□□□□ -0.8
SHOX2-206ENST00000554685 NDUFA6P56556 154 aa10.08□□□□□ -0.8
SHOX2-206ENST00000554685 IQCJQ1A5X6 159 aa10.08□□□□□ -0.8
SHOX2-206ENST00000554685 DAZ4Q86SG3 579 aaKnown RBP10.08□□□□□ -0.8
SHOX2-206ENST00000554685 CHCHD1Q96BP2 118 aaKnown RBP10.08□□□□□ -0.8
SHOX2-206ENST00000554685 DAZ3Q9NR90 486 aaKnown RBP10.08□□□□□ -0.8
SHOX2-206ENST00000554685 A0A0J9YY99 117 aa10.07□□□□□ -0.8
SHOX2-206ENST00000554685 I3L3M4 83 aa10.07□□□□□ -0.8
SHOX2-206ENST00000554685 LINC00614P0C842 121 aa10.07□□□□□ -0.8
SHOX2-206ENST00000554685 UBE2D3P61077 147 aa10.07□□□□□ -0.8
SHOX2-206ENST00000554685 UBE2D2P62837 147 aa10.07□□□□□ -0.8
SHOX2-206ENST00000554685 MRPL23Q16540 153 aaKnown RBP10.07□□□□□ -0.8
SHOX2-206ENST00000554685 TMEM97Q5BJF2 176 aa10.07□□□□□ -0.8
SHOX2-206ENST00000554685 COA6Q5JTJ3 125 aaKnown RBP10.07□□□□□ -0.8
SHOX2-206ENST00000554685 VSIG2Q96IQ7 327 aa10.07□□□□□ -0.8
SHOX2-206ENST00000554685 TMA7Q9Y2S6 64 aaKnown RBP10.07□□□□□ -0.8
SHOX2-206ENST00000554685 ICOSQ9Y6W8 199 aa10.07□□□□□ -0.8
SHOX2-206ENST00000554685 IFI27P40305 119 aaPredicted RBP10.06□□□□□ -0.8
SHOX2-206ENST00000554685 RNASEKQ6P5S7 137 aaKnown RBP10.06□□□□□ -0.8
SHOX2-206ENST00000554685 NIT1Q86X76 327 aa10.06□□□□□ -0.8
SHOX2-206ENST00000554685 AP5S1Q9NUS5 200 aa10.06□□□□□ -0.8
SHOX2-206ENST00000554685 TENM3Q9P273 2699 aa10.05□□□□□ -0.8
SHOX2-206ENST00000554685 IGLV2-18A0A075B6J9 118 aa10.05□□□□□ -0.8
SHOX2-206ENST00000554685 LOC100131303A0A0U1RQF7 123 aa10.05□□□□□ -0.8
SHOX2-206ENST00000554685 LINC00694P0DN24 101 aa10.05□□□□□ -0.8
SHOX2-206ENST00000554685 G0S2P27469 103 aa10.05□□□□□ -0.8
SHOX2-206ENST00000554685 FCER1GP30273 86 aa10.05□□□□□ -0.8
SHOX2-206ENST00000554685 COTL1Q14019 142 aa10.05□□□□□ -0.8
SHOX2-206ENST00000554685 PHLDA1Q8WV24 401 aaPredicted RBP10.05□□□□□ -0.8
SHOX2-206ENST00000554685 FBN3Q75N90 2809 aa10.05□□□□□ -0.8
SHOX2-206ENST00000554685 LINC01546A6NGU7 62 aa10.04□□□□□ -0.8
SHOX2-206ENST00000554685 HSBP1O75506 76 aa10.04□□□□□ -0.8
SHOX2-206ENST00000554685 SERF1AO75920 110 aa10.04□□□□□ -0.8
SHOX2-206ENST00000554685 ORMDL2Q53FV1 153 aa10.04□□□□□ -0.8
SHOX2-206ENST00000554685 C15orf53Q8NAA6 179 aa10.04□□□□□ -0.8
SHOX2-206ENST00000554685 ATP6V0E2Q8NHE4 81 aa10.04□□□□□ -0.8
SHOX2-206ENST00000554685 Q9UF83 564 aa10.04□□□□□ -0.8
SHOX2-206ENST00000554685 HUWE1Q7Z6Z7 4374 aaKnown RBP10.03□□□□□ -0.8
SHOX2-206ENST00000554685 ESDP10768 282 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms