RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 LST1O00453 97 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 BCE1O60756 84 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 COX7A1P24310 79 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 CMC4P56277 68 aaPredicted RBP2.44□□□□□ -2.02
SEC23A-207ENST00000554615 SFTA2Q6UW10 78 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 OR5T1Q8NG75 326 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 PRADC1Q9BSG0 188 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 HSPG2P98160 4391 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 PKD1P98161 4303 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 A0A1B0GUV1 79 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 RNASE1P07998 156 aaKnown RBP2.43□□□□□ -2.02
SEC23A-207ENST00000554615 EDN2P20800 178 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 C1orf158Q8N1D5 194 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.43□□□□□ -2.02
SEC23A-207ENST00000554615 OR10J6PQ8NGY7 276 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 RHPN1-AS1Q9BWJ2 59 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 CYSLTR1Q9Y271 337 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 RAXQ9Y2V3 346 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 BDP1A6H8Y1 2624 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 OR11H12B2RN74 326 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 TMEM238C9JI98 176 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 F8WDY8 70 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 ID1P41134 155 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 SS18Q15532 418 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 DEFB114Q30KQ6 69 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 TMEM95Q3KNT9 176 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 KRTAP26-1Q6PEX3 210 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 TMEM61Q8N0U2 210 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 TEX29Q8N6K0 151 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 OR11H1Q8NG94 326 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 OR11H2Q8NH07 326 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 HILPDAQ9Y5L2 63 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 CXCL5P42830 114 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 RPL28P46779 137 aaKnown RBP2.43□□□□□ -2.02
SEC23A-207ENST00000554615 C21orf62-AS1Q17RA5 79 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 Q6ZSN1 163 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 MAP6D1Q9H9H5 199 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 CFAP46Q8IYW2 2715 aa2.43□□□□□ -2.02
SEC23A-207ENST00000554615 TRBV6-4A0A1B0GX49 114 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 H3BTX0 84 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 GNRH2O43555 120 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 SAP30O75446 220 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 CNIH1O95406 144 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 TCL1BO95988 128 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 TRACP01848 142 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 PLA2G2AP14555 144 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 NTM-AS1Q6ZSK4 140 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 SMIM15Q7Z3B0 74 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 SIGMAR1Q99720 223 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 DNAH11Q96DT5 4516 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.42□□□□□ -2.02
SEC23A-207ENST00000554615 TRBV10-2A0A0K0K1G8 114 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 NDUFC2O95298 119 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 IGLV1-51P01701 117 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 ORM1P02763 201 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 FABP2P12104 132 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 DEFB112Q30KQ8 113 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 SPCS1Q9Y6A9 102 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 CELSR2Q9HCU4 2923 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 KNTC1P50748 2209 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 GAGE10A6NGK3 116 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 SMIM1B2RUZ4 78 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 H3BNG1 76 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 H3BVH4 76 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 J3QQQ9 107 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 PPDPFLQ8WWR9 84 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 CDC42SE2Q9NRR3 84 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 CSMD3Q7Z407 3707 aa2.42□□□□□ -2.02
SEC23A-207ENST00000554615 IGHV3OR16-12A0A075B7B8 117 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 IGHV3-21A0A0B4J1V1 117 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 TRBV7-6A0A0J9YX20 115 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 TEX48A0A1B0GUV7 120 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 A6NJY4 79 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 HERV-K104P63124 156 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 ODF3L2Q3SX64 289 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 DAZ4Q86SG3 579 aaKnown RBP2.41□□□□□ -2.02
SEC23A-207ENST00000554615 DAND5Q8N907 189 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 DAZ3Q9NR90 486 aaKnown RBP2.41□□□□□ -2.02
SEC23A-207ENST00000554615 ERG28Q9UKR5 140 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 TP53TG1Q9Y2A0 90 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 GAGE12HA6NDE8 117 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 NCBP2LA6PVI3 153 aaKnown RBP2.41□□□□□ -2.02
SEC23A-207ENST00000554615 GTSCR1Q86UQ5 136 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 OR4C5Q8NGB2 326 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 MGAQ8IWI9 3026 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 CACNA1BQ00975 2339 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 IGHV3-66A0A0C4DH42 116 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 LY6HO94772 140 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 IGHV3-30-3P0DP02 117 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 NANOS2P60321 138 aaKnown RBP2.41□□□□□ -2.02
SEC23A-207ENST00000554615 TM4SF20Q53R12 229 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 ADAMTSL4-AS1Q5T5F5 129 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 LINC00242Q5T6M2 205 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 ZNF479Q96JC4 524 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 C16orf92Q96LL3 132 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 SCGB3A1Q96QR1 104 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 PRO1854Q9UHT4 67 aa2.41□□□□□ -2.02
SEC23A-207ENST00000554615 DIDO1Q9BTC0 2240 aaKnown RBP2.4□□□□□ -2.02
SEC23A-207ENST00000554615 NBEAQ8NFP9 2946 aa2.4□□□□□ -2.02
SEC23A-207ENST00000554615 LCE6AA0A183 80 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms