RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
SHMT2-211ENST00000554310 SSBP4Q9BWG4 385 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-211ENST00000554310 KRTAP17-1Q9BYP8 105 aa9.06□□□□□ -0.96
SHMT2-211ENST00000554310 ICOSQ9Y6W8 199 aa9.06□□□□□ -0.96
SHMT2-211ENST00000554310 A0A096LPF7 62 aa9.05□□□□□ -0.96
SHMT2-211ENST00000554310 NBDYA0A0U1RRE5 68 aa9.05□□□□□ -0.96
SHMT2-211ENST00000554310 RTL8CO15255 209 aa9.05□□□□□ -0.96
SHMT2-211ENST00000554310 PAX4O43316 350 aa9.05□□□□□ -0.96
SHMT2-211ENST00000554310 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
SHMT2-211ENST00000554310 FHL2Q14192 279 aa9.05□□□□□ -0.96
SHMT2-211ENST00000554310 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
SHMT2-211ENST00000554310 FER1L6-AS1Q8NA97 138 aa9.05□□□□□ -0.96
SHMT2-211ENST00000554310 C11orf21Q9P2W6 132 aa9.05□□□□□ -0.96
SHMT2-211ENST00000554310 MRPS16Q9Y3D3 137 aaKnown RBP9.05□□□□□ -0.96
SHMT2-211ENST00000554310 TRAV4A0A0B4J268 109 aa9.04□□□□□ -0.96
SHMT2-211ENST00000554310 TRGV4A0A0C4DH28 118 aa9.04□□□□□ -0.96
SHMT2-211ENST00000554310 PCP4L1A6NKN8 68 aa9.04□□□□□ -0.96
SHMT2-211ENST00000554310 CRYBA4P53673 196 aa9.04□□□□□ -0.96
SHMT2-211ENST00000554310 LYZL1Q6UWQ5 148 aa9.04□□□□□ -0.96
SHMT2-211ENST00000554310 ZNF479Q96JC4 524 aa9.04□□□□□ -0.96
SHMT2-211ENST00000554310 HHLA3Q9XRX5 114 aa9.04□□□□□ -0.96
SHMT2-211ENST00000554310 FAT2Q9NYQ8 4349 aa9.04□□□□□ -0.96
SHMT2-211ENST00000554310 DNAH17Q9UFH2 4485 aa9.04□□□□□ -0.96
SHMT2-211ENST00000554310 TMSB15BA0A087X1C1 80 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 PRSS29PA6NIE9 313 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 ORM1P02763 201 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 ESRGQ1W209 222 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 TTC32Q5I0X7 151 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 C1orf134Q5TEV5 83 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 ZNF575Q86XF7 245 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 OR4C5Q8NGB2 326 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 C9orf85Q96MD7 179 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 CNFNQ9BYD5 112 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 SAMD10Q9BYL1 202 aa9.03□□□□□ -0.96
SHMT2-211ENST00000554310 MRPL23Q16540 153 aaKnown RBP9.02□□□□□ -0.97
SHMT2-211ENST00000554310 IQCJQ1A5X6 159 aa9.02□□□□□ -0.97
SHMT2-211ENST00000554310 CDPF1Q6NVV7 123 aa9.02□□□□□ -0.97
SHMT2-211ENST00000554310 Q9H8V8 135 aa9.02□□□□□ -0.97
SHMT2-211ENST00000554310 ZNF876PQ49A33 203 aa9.01□□□□□ -0.97
SHMT2-211ENST00000554310 PTH2Q96A98 100 aa9.01□□□□□ -0.97
SHMT2-211ENST00000554310 TPPP3Q9BW30 176 aa9.01□□□□□ -0.97
SHMT2-211ENST00000554310 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
SHMT2-211ENST00000554310 A0A1B0GVY2 172 aa9□□□□□ -0.97
SHMT2-211ENST00000554310 CIDEAO60543 219 aa9□□□□□ -0.97
SHMT2-211ENST00000554310 ASIPP42127 132 aa9□□□□□ -0.97
SHMT2-211ENST00000554310 AMTP48728 403 aa9□□□□□ -0.97
SHMT2-211ENST00000554310 FAM104BQ5XKR9 115 aa9□□□□□ -0.97
SHMT2-211ENST00000554310 C6orf223Q8N319 242 aa9□□□□□ -0.97
SHMT2-211ENST00000554310 CHCHD1Q96BP2 118 aaKnown RBP9□□□□□ -0.97
SHMT2-211ENST00000554310 HSBP1O75506 76 aa8.99□□□□□ -0.97
SHMT2-211ENST00000554310 RNASE3P12724 160 aaKnown RBP8.99□□□□□ -0.97
SHMT2-211ENST00000554310 GYPEP15421 78 aa8.99□□□□□ -0.97
SHMT2-211ENST00000554310 S100A4P26447 101 aaKnown RBP8.99□□□□□ -0.97
SHMT2-211ENST00000554310 NEGR1Q7Z3B1 354 aa8.99□□□□□ -0.97
SHMT2-211ENST00000554310 NIT1Q86X76 327 aa8.99□□□□□ -0.97
SHMT2-211ENST00000554310 URB1-AS1Q96HZ7 61 aa8.99□□□□□ -0.97
SHMT2-211ENST00000554310 TMEM191AQ9H0A3 160 aa8.99□□□□□ -0.97
SHMT2-211ENST00000554310 K7EQD1 137 aa8.98□□□□□ -0.97
SHMT2-211ENST00000554310 RS1O15537 224 aa8.98□□□□□ -0.97
SHMT2-211ENST00000554310 SNAI2O43623 268 aa8.98□□□□□ -0.97
SHMT2-211ENST00000554310 OR5AL1P0C617 328 aa8.98□□□□□ -0.97
SHMT2-211ENST00000554310 GATA1P15976 413 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-211ENST00000554310 BTF3P20290 206 aaKnown RBP8.98□□□□□ -0.97
SHMT2-211ENST00000554310 PMCHP20382 165 aa8.98□□□□□ -0.97
SHMT2-211ENST00000554310 NTF3P20783 257 aa8.98□□□□□ -0.97
SHMT2-211ENST00000554310 CACNG7P62955 275 aa8.98□□□□□ -0.97
SHMT2-211ENST00000554310 PIK3CD-AS1Q5SR53 167 aa8.98□□□□□ -0.97
SHMT2-211ENST00000554310 CFAP126Q5VTH2 177 aa8.98□□□□□ -0.97
SHMT2-211ENST00000554310 RNASEKQ6P5S7 137 aaKnown RBP8.98□□□□□ -0.97
SHMT2-211ENST00000554310 SIVA1O15304 175 aa8.97□□□□□ -0.97
SHMT2-211ENST00000554310 NXPH4O95158 308 aa8.97□□□□□ -0.97
SHMT2-211ENST00000554310 SCGB1D1O95968 90 aa8.97□□□□□ -0.97
SHMT2-211ENST00000554310 MED14OSP0DP75 135 aa8.97□□□□□ -0.97
SHMT2-211ENST00000554310 RAB4AP20338 218 aa8.97□□□□□ -0.97
SHMT2-211ENST00000554310 PKIAP61925 76 aa8.97□□□□□ -0.97
SHMT2-211ENST00000554310 TWIST1Q15672 202 aa8.97□□□□□ -0.97
SHMT2-211ENST00000554310 LYPD5Q6UWN5 251 aa8.97□□□□□ -0.97
SHMT2-211ENST00000554310 SH2D6Q7Z4S9 175 aa8.97□□□□□ -0.97
SHMT2-211ENST00000554310 KRTAP1-5Q9BYS1 174 aa8.97□□□□□ -0.97
SHMT2-211ENST00000554310 PKHD1P08F94 4074 aa8.96□□□□□ -0.97
SHMT2-211ENST00000554310 TRBV6-4A0A1B0GX49 114 aa8.96□□□□□ -0.98
SHMT2-211ENST00000554310 H3BVH4 76 aa8.96□□□□□ -0.98
SHMT2-211ENST00000554310 LINC00614P0C842 121 aa8.96□□□□□ -0.98
SHMT2-211ENST00000554310 RHOHQ15669 191 aa8.96□□□□□ -0.98
SHMT2-211ENST00000554310 MRPL51Q4U2R6 128 aaKnown RBP8.96□□□□□ -0.98
SHMT2-211ENST00000554310 AMN1Q8IY45 258 aa8.96□□□□□ -0.98
SHMT2-211ENST00000554310 ORMDL3Q8N138 153 aa8.96□□□□□ -0.98
SHMT2-211ENST00000554310 A8MWV9 139 aa8.95□□□□□ -0.98
SHMT2-211ENST00000554310 PPBPP02775 128 aa8.95□□□□□ -0.98
SHMT2-211ENST00000554310 ZFP2Q6ZN57 461 aa8.95□□□□□ -0.98
SHMT2-211ENST00000554310 FAM19A2Q8N3H0 131 aa8.95□□□□□ -0.98
SHMT2-211ENST00000554310 SYT8Q8NBV8 401 aa8.95□□□□□ -0.98
SHMT2-211ENST00000554310 PRADC1Q9BSG0 188 aa8.95□□□□□ -0.98
SHMT2-211ENST00000554310 PKD1P98161 4303 aa8.95□□□□□ -0.98
SHMT2-211ENST00000554310 D6R8Y8 96 aa8.94□□□□□ -0.98
SHMT2-211ENST00000554310 TSTD3H0UI37 97 aa8.94□□□□□ -0.98
SHMT2-211ENST00000554310 TIRAPP58753 221 aa8.94□□□□□ -0.98
SHMT2-211ENST00000554310 KRTDAPP60985 99 aa8.94□□□□□ -0.98
SHMT2-211ENST00000554310 SLC25A29Q8N8R3 303 aa8.94□□□□□ -0.98
SHMT2-211ENST00000554310 RNF185Q96GF1 192 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms