RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 SH2D1AO60880 128 aa8.65□□□□□ -1.02
NEDD1-206ENST00000554226 IQCJQ1A5X6 159 aa8.65□□□□□ -1.02
NEDD1-206ENST00000554226 FAM162BQ5T6X4 162 aa8.65□□□□□ -1.02
NEDD1-206ENST00000554226 MZT2BQ6NZ67 158 aa8.65□□□□□ -1.02
NEDD1-206ENST00000554226 CLPSL2Q6UWE3 100 aa8.65□□□□□ -1.02
NEDD1-206ENST00000554226 ZFP30Q9Y2G7 519 aa8.65□□□□□ -1.02
NEDD1-206ENST00000554226 MUC2Q02817 5179 aa8.64□□□□□ -1.03
NEDD1-206ENST00000554226 TRBV25-1A0A075B6N4 114 aa8.64□□□□□ -1.03
NEDD1-206ENST00000554226 SRSF9Q13242 221 aaKnown RBP eCLIP8.64□□□□□ -1.03
NEDD1-206ENST00000554226 ZNF674Q2M3X9 581 aa8.64□□□□□ -1.03
NEDD1-206ENST00000554226 HIST1H2BAQ96A08 127 aa8.64□□□□□ -1.03
NEDD1-206ENST00000554226 IGLV10-54A0A075B6I4 117 aa8.63□□□□□ -1.03
NEDD1-206ENST00000554226 TRBV6-1A0A0K0K1D8 114 aa8.63□□□□□ -1.03
NEDD1-206ENST00000554226 A0A1B0GUV1 79 aa8.63□□□□□ -1.03
NEDD1-206ENST00000554226 PEX7O00628 323 aa8.63□□□□□ -1.03
NEDD1-206ENST00000554226 MBP02144 154 aa8.63□□□□□ -1.03
NEDD1-206ENST00000554226 SERF2P84101 59 aa8.63□□□□□ -1.03
NEDD1-206ENST00000554226 A6NJY4 79 aa8.62□□□□□ -1.03
NEDD1-206ENST00000554226 NDUFS6O75380 124 aaKnown RBP8.62□□□□□ -1.03
NEDD1-206ENST00000554226 COX6A2Q02221 97 aa8.62□□□□□ -1.03
NEDD1-206ENST00000554226 GAGE6Q13070 117 aa8.62□□□□□ -1.03
NEDD1-206ENST00000554226 ZNF56Q15929 161 aa8.62□□□□□ -1.03
NEDD1-206ENST00000554226 C20orf203Q8NBC4 194 aa8.62□□□□□ -1.03
NEDD1-206ENST00000554226 GTSF1Q8WW33 167 aa8.62□□□□□ -1.03
NEDD1-206ENST00000554226 DERL1Q9BUN8 251 aa8.62□□□□□ -1.03
NEDD1-206ENST00000554226 NKX6-2Q9C056 277 aaPredicted RBP8.62□□□□□ -1.03
NEDD1-206ENST00000554226 IFNA7P01567 189 aa8.61□□□□□ -1.03
NEDD1-206ENST00000554226 CXCL1P09341 107 aa8.61□□□□□ -1.03
NEDD1-206ENST00000554226 C15orf56Q8N910 161 aa8.61□□□□□ -1.03
NEDD1-206ENST00000554226 TNFSF18Q9UNG2 199 aa8.61□□□□□ -1.03
NEDD1-206ENST00000554226 ATP6V0CP27449 155 aa8.6□□□□□ -1.03
NEDD1-206ENST00000554226 FMC1Q96HJ9 113 aa8.6□□□□□ -1.03
NEDD1-206ENST00000554226 SSBP4Q9BWG4 385 aaPredicted RBP8.6□□□□□ -1.03
NEDD1-206ENST00000554226 ACTR3CQ9C0K3 210 aaPredicted RBP8.6□□□□□ -1.03
NEDD1-206ENST00000554226 TMSB15BA0A087X1C1 80 aa8.59□□□□□ -1.03
NEDD1-206ENST00000554226 IGHV1-24A0A0C4DH33 117 aa8.59□□□□□ -1.03
NEDD1-206ENST00000554226 SNAI2O43623 268 aa8.59□□□□□ -1.03
NEDD1-206ENST00000554226 LTAP01374 205 aa8.59□□□□□ -1.03
NEDD1-206ENST00000554226 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
NEDD1-206ENST00000554226 RPS10P46783 165 aaKnown RBP8.59□□□□□ -1.03
NEDD1-206ENST00000554226 MAJINQ3KP22 176 aa8.59□□□□□ -1.03
NEDD1-206ENST00000554226 STPG4Q8N801 248 aa8.59□□□□□ -1.03
NEDD1-206ENST00000554226 OR10AG1Q8NH19 301 aa8.59□□□□□ -1.03
NEDD1-206ENST00000554226 PRSS3P2Q8NHM4 247 aa8.59□□□□□ -1.03
NEDD1-206ENST00000554226 MUC21A0A0G2JKD1 596 aa8.58□□□□□ -1.04
NEDD1-206ENST00000554226 FAM74A7A6NL05 159 aa8.58□□□□□ -1.04
NEDD1-206ENST00000554226 LINC00299Q6ZSB3 139 aa8.58□□□□□ -1.04
NEDD1-206ENST00000554226 ENKURQ8TC29 256 aa8.58□□□□□ -1.04
NEDD1-206ENST00000554226 TCEAL7Q9BRU2 100 aa8.58□□□□□ -1.04
NEDD1-206ENST00000554226 ZNF471Q9BX82 626 aaPredicted RBP8.58□□□□□ -1.04
NEDD1-206ENST00000554226 FAT4Q6V0I7 4981 aa8.57□□□□□ -1.04
NEDD1-206ENST00000554226 IGLV4-60A0A075B6I1 120 aa8.57□□□□□ -1.04
NEDD1-206ENST00000554226 OR5AL1P0C617 328 aa8.57□□□□□ -1.04
NEDD1-206ENST00000554226 CFAP161Q6P656 301 aa8.57□□□□□ -1.04
NEDD1-206ENST00000554226 AQP10Q96PS8 301 aa8.57□□□□□ -1.04
NEDD1-206ENST00000554226 MARVELD1Q9BSK0 173 aa8.57□□□□□ -1.04
NEDD1-206ENST00000554226 GFRA4Q9GZZ7 299 aa8.57□□□□□ -1.04
NEDD1-206ENST00000554226 LINC00474Q9P2X8 69 aa8.57□□□□□ -1.04
NEDD1-206ENST00000554226 IGKV2-24A0A0C4DH68 120 aa8.56□□□□□ -1.04
NEDD1-206ENST00000554226 INMT-MINDY4F8WBC2 141 aa8.56□□□□□ -1.04
NEDD1-206ENST00000554226 ZNF726P1Q15940 193 aa8.56□□□□□ -1.04
NEDD1-206ENST00000554226 Q6ZRP5 223 aa8.56□□□□□ -1.04
NEDD1-206ENST00000554226 A0A096LNI7 61 aa8.55□□□□□ -1.04
NEDD1-206ENST00000554226 GVQW2A0A096LPI5 108 aaPredicted RBP8.55□□□□□ -1.04
NEDD1-206ENST00000554226 CTXND1A0A1B0GTU2 59 aa8.55□□□□□ -1.04
NEDD1-206ENST00000554226 F5H697 171 aa8.55□□□□□ -1.04
NEDD1-206ENST00000554226 UBE2G2P60604 165 aa8.55□□□□□ -1.04
NEDD1-206ENST00000554226 UBE2G1P62253 170 aa8.55□□□□□ -1.04
NEDD1-206ENST00000554226 A0A0U1RQV1 116 aa8.54□□□□□ -1.04
NEDD1-206ENST00000554226 A6NHS1 94 aa8.54□□□□□ -1.04
NEDD1-206ENST00000554226 M0QY20 66 aa8.54□□□□□ -1.04
NEDD1-206ENST00000554226 FHITP49789 147 aa8.54□□□□□ -1.04
NEDD1-206ENST00000554226 LYPD6BQ8NI32 183 aa8.54□□□□□ -1.04
NEDD1-206ENST00000554226 PGLYRP4Q96LB8 373 aa8.54□□□□□ -1.04
NEDD1-206ENST00000554226 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
NEDD1-206ENST00000554226 MED28Q9H204 178 aa8.54□□□□□ -1.04
NEDD1-206ENST00000554226 PKIGQ9Y2B9 76 aa8.54□□□□□ -1.04
NEDD1-206ENST00000554226 SSNA1O43805 119 aa8.53□□□□□ -1.04
NEDD1-206ENST00000554226 RAB5CP51148 216 aa8.53□□□□□ -1.04
NEDD1-206ENST00000554226 SPANXN1Q5VSR9 72 aa8.53□□□□□ -1.04
NEDD1-206ENST00000554226 AP1S3Q96PC3 154 aa8.53□□□□□ -1.04
NEDD1-206ENST00000554226 FAM231BA6NCW3 169 aa8.52□□□□□ -1.05
NEDD1-206ENST00000554226 H7C1H1 209 aa8.52□□□□□ -1.05
NEDD1-206ENST00000554226 INO80EQ8NBZ0 244 aaPredicted RBP8.52□□□□□ -1.05
NEDD1-206ENST00000554226 MLST8Q9BVC4 326 aa8.52□□□□□ -1.05
NEDD1-206ENST00000554226 GAGE12HA6NDE8 117 aa8.51□□□□□ -1.05
NEDD1-206ENST00000554226 UPK1BO75841 260 aa8.51□□□□□ -1.05
NEDD1-206ENST00000554226 SMIM17P0DL12 118 aa8.51□□□□□ -1.05
NEDD1-206ENST00000554226 SULT1A2P50226 295 aa8.51□□□□□ -1.05
NEDD1-206ENST00000554226 ZNF664Q8N3J9 261 aa8.51□□□□□ -1.05
NEDD1-206ENST00000554226 HIGD2BQ4VC39 106 aa8.5□□□□□ -1.05
NEDD1-206ENST00000554226 S100ZQ8WXG8 99 aa8.5□□□□□ -1.05
NEDD1-206ENST00000554226 PSORS1C2Q9UIG4 136 aa8.5□□□□□ -1.05
NEDD1-206ENST00000554226 S100A9P06702 114 aaKnown RBP8.49□□□□□ -1.05
NEDD1-206ENST00000554226 MUC21A0A140T8X8 626 aa8.48□□□□□ -1.05
NEDD1-206ENST00000554226 AKR1C3P42330 323 aa8.48□□□□□ -1.05
NEDD1-206ENST00000554226 IFITM3Q01628 133 aa8.48□□□□□ -1.05
NEDD1-206ENST00000554226 SUMO4Q6EEV6 95 aa8.48□□□□□ -1.05
NEDD1-206ENST00000554226 NDUFA13Q9P0J0 144 aa8.48□□□□□ -1.05
NEDD1-206ENST00000554226 UBE2L6O14933 153 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms