RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 IGLV5-52A0A0A0MRZ9 124 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 TRAV8-3A0A0A6YYJ7 113 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 IGHV3-73A0A0B4J1V6 119 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 C9JQL5 133 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 K7EN84 100 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 M0R036 132 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 PPP1R2P9O14990 202 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 GATCO43716 136 aaKnown RBP4.41□□□□□ -1.7
SLIRP-203ENST00000554074 ARMS2P0C7Q2 107 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 FOXA3P55318 350 aaPredicted RBP4.41□□□□□ -1.7
SLIRP-203ENST00000554074 SRSF3P84103 164 aaKnown RBP4.41□□□□□ -1.7
SLIRP-203ENST00000554074 Q5VSD8 79 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 Q8N814 137 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 FER1L6-AS1Q8NA97 138 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 ISOC2Q96AB3 205 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 SFRP2Q96HF1 295 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 SEC11CQ9BY50 192 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 CNFNQ9BYD5 112 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 FLG2Q5D862 2391 aaPredicted RBP4.41□□□□□ -1.7
SLIRP-203ENST00000554074 SRRM2Q9UQ35 2752 aaKnown RBP4.41□□□□□ -1.7
SLIRP-203ENST00000554074 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
SLIRP-203ENST00000554074 VPS13BQ7Z7G8 4022 aa4.4□□□□□ -1.7
SLIRP-203ENST00000554074 TMEM218A2RU14 115 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 H3BVH4 76 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 IGHV3-30P01768 117 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 IGHV3-33P01772 117 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 IGLC6P0CF74 106 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 INAFM2P0DMQ5 153 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 IGHV3-30-3P0DP02 117 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 IGHV3-30-5P0DP03 117 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 CTRLP40313 264 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 RPL23P62829 140 aaKnown RBP4.4□□□□□ -1.71
SLIRP-203ENST00000554074 NDUFA5Q16718 116 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 Q6ZSN1 163 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 COMMD7Q86VX2 200 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 OR10G8Q8NGN5 311 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 TSKUQ8WUA8 353 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 ANAPC16Q96DE5 110 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 Q9HAA7 133 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 COX11Q9Y6N1 276 aa4.4□□□□□ -1.71
SLIRP-203ENST00000554074 TRBV10-1A0A0K0K1A3 114 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 GAGE12JA6NER3 117 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 MT-ND4LP03901 98 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 TRGC1P0CF51 173 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 GAGE1Q13065 139 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 GAGE4Q13068 117 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 GAGE5Q13069 117 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 ADIRFQ15847 76 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 GAGE13Q4V321 117 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 C10orf91Q5T1B1 145 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 SPANXN1Q5VSR9 72 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 BORCS7Q96B45 105 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 CHCHD7Q9BUK0 85 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 SAMD10Q9BYL1 202 aa4.39□□□□□ -1.71
SLIRP-203ENST00000554074 RNASE7Q9H1E1 156 aaKnown RBP4.39□□□□□ -1.71
SLIRP-203ENST00000554074 TMSB15BA0A087X1C1 80 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 A0A1B0GW15 77 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 GRIFINA4D1Z8 144 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 F8W036 122 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 FAM229AH3BQW9 127 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 RPL19P84098 196 aaKnown RBP4.38□□□□□ -1.71
SLIRP-203ENST00000554074 Q6ZSA8 131 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 SMIM15Q7Z3B0 74 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 C14orf178Q8N769 122 aaPredicted RBP4.38□□□□□ -1.71
SLIRP-203ENST00000554074 RMI2Q96E14 147 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 AP1S3Q96PC3 154 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 IMMP2LQ96T52 175 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 CTDSP1Q9GZU7 261 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 JPT2Q9H910 190 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 TMEM242Q9NWH2 141 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 NAT8BQ9UHF3 227 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 CARHSP1Q9Y2V2 147 aaKnown RBP4.38□□□□□ -1.71
SLIRP-203ENST00000554074 V9GYV3 84 aa4.38□□□□□ -1.71
SLIRP-203ENST00000554074 A0A1B0GUT8 65 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 SMIM27A0A1W2PRY6 76 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 HIGD1CA8MV81 97 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 M0R381 172 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 S100A8P05109 93 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 RAB4BP61018 213 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 RPL36AP83881 106 aaKnown RBP4.37□□□□□ -1.71
SLIRP-203ENST00000554074 RIGQ13278 110 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 ELOBQ15370 118 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 FAM74A4Q5TZK3 123 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 ATRAIDQ6UW56 229 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 LYZL1Q6UWQ5 148 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 DAZ4Q86SG3 579 aaKnown RBP4.37□□□□□ -1.71
SLIRP-203ENST00000554074 NIT1Q86X76 327 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 Q8N3U1 123 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 OR10AG1Q8NH19 301 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 RPL36ALQ969Q0 106 aaKnown RBP4.37□□□□□ -1.71
SLIRP-203ENST00000554074 DAZ3Q9NR90 486 aaKnown RBP4.37□□□□□ -1.71
SLIRP-203ENST00000554074 Q9UF83 564 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 URGCP-MRPS24S4R325 110 aa4.37□□□□□ -1.71
SLIRP-203ENST00000554074 TRBV7-3A0A075B6L6 115 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 TRAV9-1A0A075B6T8 112 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 A0A087WWL8 130 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 H7C1H1 209 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 SMR3BP02814 79 aaPredicted RBP4.36□□□□□ -1.71
SLIRP-203ENST00000554074 GZMBP10144 247 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms