RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 F6UB75 175 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 M0QY20 66 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 TRBV12-3P01733 135 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 CFC1BP0CG36 223 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 CFC1P0CG37 223 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 P0DMU3 169 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 FAM231AP0DMU4 169 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 FAM231CP0DMU5 169 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 IGHV4-38-2P0DP08 117 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 CD28P10747 220 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 SRD5A1P18405 259 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 BLCAPP62952 87 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 LY6DQ14210 128 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 TCTEX1D4Q5JR98 221 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 TEN1Q86WV5 123 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 C20orf203Q8NBC4 194 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 ZNF418Q8TF45 676 aaPredicted RBP4.19□□□□□ -1.74
UBR7-203ENST00000553857 DCANP1Q8TF63 244 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 RNF183Q96D59 192 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 DUX3Q96PT4 197 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 GTSF1LQ9H1H1 148 aa4.19□□□□□ -1.74
UBR7-203ENST00000553857 CACNA1HO95180 2353 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 ZNF318Q5VUA4 2279 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 TMEM223A0PJW6 202 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 TIMM17BO60830 172 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 TSPAN13O95857 204 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 IGHV3-30P01768 117 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 PRSS2P07478 247 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 IGHV3-30-5P0DP03 117 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 COX6B1P14854 86 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 SYNJ2BPP57105 145 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 UBE2D3P61077 147 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 UBE2D2P62837 147 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 CFHR3Q02985 330 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 CFAP126Q5VTH2 177 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 SPAG8Q99932 426 aaPredicted RBP4.18□□□□□ -1.74
UBR7-203ENST00000553857 VPREB3Q9UKI3 123 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 PKDREJQ9NTG1 2253 aa4.18□□□□□ -1.74
UBR7-203ENST00000553857 EP300Q09472 2414 aaPredicted RBP4.17□□□□□ -1.74
UBR7-203ENST00000553857 VCANP13611 3396 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 IGLV4-69A0A075B6H9 119 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 TRAV25A0A0B4J276 109 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 A0A0J9YXY3 114 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 TINCRA0A1B0GVN0 87 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 SNCGO76070 127 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 TGFAP01135 160 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 INSP01308 110 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 IGKV3-20P01619 116 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 CRYGDP07320 174 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 SPINK8P0C7L1 97 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 LINC00315P59091 139 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 CKS1BP61024 79 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 SPINK13Q1W4C9 94 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 KHDC1LQ5JSQ8 128 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 MORN3Q6PF18 240 aaPredicted RBP4.17□□□□□ -1.74
UBR7-203ENST00000553857 AMTNQ6UX39 209 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 SH2D6Q7Z4S9 175 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 KLHL30-AS1Q8NEE0 82 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 LINC00467Q9BRT7 94 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 EYSQ5T1H1 3165 aa4.17□□□□□ -1.74
UBR7-203ENST00000553857 POLEQ07864 2286 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 BDP1A6H8Y1 2624 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 ROS1P08922 2347 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 CNOT1A5YKK6 2376 aaKnown RBP4.16□□□□□ -1.74
UBR7-203ENST00000553857 IGHV4-30-2A0A087WSY4 118 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 TRBV30A0A0K0K1B3 111 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 A0A1W2PPR1 153 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 C9JAW5 83 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 SLC25A20O43772 301 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 TSHBP01222 138 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 HTN1P15515 57 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 HOXD3P31249 432 aaPredicted RBP4.16□□□□□ -1.74
UBR7-203ENST00000553857 RPL39P62891 51 aaKnown RBP4.16□□□□□ -1.74
UBR7-203ENST00000553857 MRPS36P82909 103 aaKnown RBP4.16□□□□□ -1.74
UBR7-203ENST00000553857 MRPL23Q16540 153 aaKnown RBP4.16□□□□□ -1.74
UBR7-203ENST00000553857 DEFB112Q30KQ8 113 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 ZFAND6Q6FIF0 208 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 TMEM101Q96IK0 257 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 LINC01587Q99440 93 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 SPANXCQ9NY87 97 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 NDUFA12Q9UI09 145 aa4.16□□□□□ -1.74
UBR7-203ENST00000553857 ACACAQ13085 2346 aa4.15□□□□□ -1.74
UBR7-203ENST00000553857 IGLV4-3A0A075B6K6 122 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 TRAV12-2A0A075B6T6 113 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 TRAV8-4A0A0B4J246 113 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 IGHV1-58A0A0C4DH39 117 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 A4D1N5 150 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 IGHV4-59P01825 116 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 ACYP1P07311 99 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 ZNF22P17026 224 aaPredicted RBP4.15□□□□□ -1.75
UBR7-203ENST00000553857 EMP1P54849 157 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 TIRAPP58753 221 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 DEFB131AP59861 70 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 HERVK_113P63121 156 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 HERV-K104P63124 156 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 RPL36AP83881 106 aaKnown RBP4.15□□□□□ -1.75
UBR7-203ENST00000553857 Q6ZQT7 251 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 MUSTN1Q8IVN3 82 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 SBSPONQ8IVN8 264 aa4.15□□□□□ -1.75
UBR7-203ENST00000553857 STHQ8IWL8 128 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms