RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 BIN3Q9NQY0 253 aa11.78□□□□□ -0.52
FOXN3-204ENST00000553840 KLK12Q9UKR0 248 aa11.78□□□□□ -0.52
FOXN3-204ENST00000553840 XKRY2A2RUG3 117 aa11.77□□□□□ -0.53
FOXN3-204ENST00000553840 TMEM262E9PQX1 116 aa11.77□□□□□ -0.53
FOXN3-204ENST00000553840 NEXN-AS1Q8NBZ9 246 aa11.77□□□□□ -0.53
FOXN3-204ENST00000553840 OR2D3Q8NGH3 330 aa11.77□□□□□ -0.53
FOXN3-204ENST00000553840 TMEM70Q9BUB7 260 aa11.77□□□□□ -0.53
FOXN3-204ENST00000553840 IGKV2D-24A0A075B6R9 120 aa11.76□□□□□ -0.53
FOXN3-204ENST00000553840 TRBV6-8A0A0A6YYG3 113 aa11.76□□□□□ -0.53
FOXN3-204ENST00000553840 RAB19A4D1S5 217 aa11.76□□□□□ -0.53
FOXN3-204ENST00000553840 PKIAP61925 76 aa11.76□□□□□ -0.53
FOXN3-204ENST00000553840 Q0VG73 95 aa11.76□□□□□ -0.53
FOXN3-204ENST00000553840 TMEM97Q5BJF2 176 aa11.76□□□□□ -0.53
FOXN3-204ENST00000553840 FER1L6-AS1Q8NA97 138 aa11.76□□□□□ -0.53
FOXN3-204ENST00000553840 UBE2WQ96B02 151 aa11.76□□□□□ -0.53
FOXN3-204ENST00000553840 TPPP3Q9BW30 176 aa11.76□□□□□ -0.53
FOXN3-204ENST00000553840 EIF5A2Q9GZV4 153 aaKnown RBP11.76□□□□□ -0.53
FOXN3-204ENST00000553840 P01737 135 aa11.75□□□□□ -0.53
FOXN3-204ENST00000553840 CACNG7P62955 275 aa11.75□□□□□ -0.53
FOXN3-204ENST00000553840 H7C1H1 209 aa11.74□□□□□ -0.53
FOXN3-204ENST00000553840 IGLV2-8P01709 118 aa11.74□□□□□ -0.53
FOXN3-204ENST00000553840 CEBPGP53567 150 aa11.74□□□□□ -0.53
FOXN3-204ENST00000553840 C19orf71A6NCJ1 209 aa11.73□□□□□ -0.53
FOXN3-204ENST00000553840 F2Z2F3 143 aa11.73□□□□□ -0.53
FOXN3-204ENST00000553840 LECT2O14960 151 aa11.73□□□□□ -0.53
FOXN3-204ENST00000553840 CRPP02741 224 aa11.73□□□□□ -0.53
FOXN3-204ENST00000553840 IGLC6P0CF74 106 aa11.73□□□□□ -0.53
FOXN3-204ENST00000553840 GZMBP10144 247 aa11.73□□□□□ -0.53
FOXN3-204ENST00000553840 Q8N976 141 aa11.73□□□□□ -0.53
FOXN3-204ENST00000553840 BAALCQ8WXS3 180 aa11.73□□□□□ -0.53
FOXN3-204ENST00000553840 FAM210AQ96ND0 272 aa11.73□□□□□ -0.53
FOXN3-204ENST00000553840 CHCHD5Q9BSY4 110 aa11.73□□□□□ -0.53
FOXN3-204ENST00000553840 APOBP04114 4563 aaKnown RBP11.72□□□□□ -0.53
FOXN3-204ENST00000553840 DNAH5Q8TE73 4624 aa11.72□□□□□ -0.53
FOXN3-204ENST00000553840 MGPP08493 103 aa11.72□□□□□ -0.53
FOXN3-204ENST00000553840 Q5VSD8 79 aa11.72□□□□□ -0.53
FOXN3-204ENST00000553840 DNAJC30Q96LL9 226 aa11.72□□□□□ -0.53
FOXN3-204ENST00000553840 KIF25-AS1Q9Y6Z4 181 aa11.72□□□□□ -0.53
FOXN3-204ENST00000553840 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.71□□□□□ -0.53
FOXN3-204ENST00000553840 TMEM250H0YL14 139 aa11.71□□□□□ -0.53
FOXN3-204ENST00000553840 TRGC1P0CF51 173 aa11.71□□□□□ -0.53
FOXN3-204ENST00000553840 WFDC2Q14508 124 aa11.71□□□□□ -0.53
FOXN3-204ENST00000553840 C1orf43Q9BWL3 253 aa11.71□□□□□ -0.53
FOXN3-204ENST00000553840 TRBV20OR9-2A0A075B6H5 130 aa11.7□□□□□ -0.54
FOXN3-204ENST00000553840 FAM229AH3BQW9 127 aa11.7□□□□□ -0.54
FOXN3-204ENST00000553840 ANGP03950 147 aaKnown RBP11.7□□□□□ -0.54
FOXN3-204ENST00000553840 C15orf54Q8N8G6 183 aa11.7□□□□□ -0.54
FOXN3-204ENST00000553840 TRBV25-1A0A075B6N4 114 aa11.69□□□□□ -0.54
FOXN3-204ENST00000553840 SMR3BP02814 79 aaPredicted RBP11.69□□□□□ -0.54
FOXN3-204ENST00000553840 INAFM2P0DMQ5 153 aa11.69□□□□□ -0.54
FOXN3-204ENST00000553840 RAB14P61106 215 aa11.69□□□□□ -0.54
FOXN3-204ENST00000553840 ATRAIDQ6UW56 229 aa11.69□□□□□ -0.54
FOXN3-204ENST00000553840 ABCA13Q86UQ4 5058 aa11.68□□□□□ -0.54
FOXN3-204ENST00000553840 M0QY20 66 aa11.68□□□□□ -0.54
FOXN3-204ENST00000553840 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
FOXN3-204ENST00000553840 LYZL1Q6UWQ5 148 aa11.68□□□□□ -0.54
FOXN3-204ENST00000553840 SRP19P09132 144 aaKnown RBP11.67□□□□□ -0.54
FOXN3-204ENST00000553840 NTF3P20783 257 aa11.67□□□□□ -0.54
FOXN3-204ENST00000553840 PEA15Q15121 130 aa11.67□□□□□ -0.54
FOXN3-204ENST00000553840 C14orf177Q52M58 125 aa11.67□□□□□ -0.54
FOXN3-204ENST00000553840 SUMO4Q6EEV6 95 aa11.67□□□□□ -0.54
FOXN3-204ENST00000553840 WDR73Q6P4I2 378 aa11.67□□□□□ -0.54
FOXN3-204ENST00000553840 NUDT10Q8NFP7 164 aa11.67□□□□□ -0.54
FOXN3-204ENST00000553840 NUDT11Q96G61 164 aa11.67□□□□□ -0.54
FOXN3-204ENST00000553840 DPH3P1Q9H4G8 78 aa11.67□□□□□ -0.54
FOXN3-204ENST00000553840 IGHV1-24A0A0C4DH33 117 aa11.66□□□□□ -0.54
FOXN3-204ENST00000553840 HAMPP81172 84 aa11.66□□□□□ -0.54
FOXN3-204ENST00000553840 MIAQ16674 131 aa11.66□□□□□ -0.54
FOXN3-204ENST00000553840 RASL11AQ6T310 242 aa11.66□□□□□ -0.54
FOXN3-204ENST00000553840 ENHOQ6UWT2 76 aa11.66□□□□□ -0.54
FOXN3-204ENST00000553840 NTM-AS1Q6ZSK4 140 aa11.66□□□□□ -0.54
FOXN3-204ENST00000553840 OCC1Q8TAD7 63 aa11.66□□□□□ -0.54
FOXN3-204ENST00000553840 NDUFS6O75380 124 aaKnown RBP11.65□□□□□ -0.54
FOXN3-204ENST00000553840 GAGE6Q13070 117 aa11.65□□□□□ -0.54
FOXN3-204ENST00000553840 SMIM7Q9BQ49 75 aa11.65□□□□□ -0.54
FOXN3-204ENST00000553840 RPP21Q9H633 154 aaKnown RBP11.65□□□□□ -0.54
FOXN3-204ENST00000553840 FAM30AQ9NZY2 134 aa11.65□□□□□ -0.54
FOXN3-204ENST00000553840 ZNF727A8MUV8 499 aa11.64□□□□□ -0.55
FOXN3-204ENST00000553840 CTRLP40313 264 aa11.64□□□□□ -0.55
FOXN3-204ENST00000553840 SRSF3P84103 164 aaKnown RBP11.64□□□□□ -0.55
FOXN3-204ENST00000553840 TWIST1Q15672 202 aa11.64□□□□□ -0.55
FOXN3-204ENST00000553840 IQCJQ1A5X6 159 aa11.64□□□□□ -0.55
FOXN3-204ENST00000553840 NIT2Q9NQR4 276 aa11.64□□□□□ -0.55
FOXN3-204ENST00000553840 C9JQL5 133 aa11.63□□□□□ -0.55
FOXN3-204ENST00000553840 K7EN84 100 aa11.63□□□□□ -0.55
FOXN3-204ENST00000553840 RBX1P62877 108 aa11.63□□□□□ -0.55
FOXN3-204ENST00000553840 IFITM2Q01629 132 aa11.63□□□□□ -0.55
FOXN3-204ENST00000553840 SMIM15Q7Z3B0 74 aa11.63□□□□□ -0.55
FOXN3-204ENST00000553840 RNASE7Q9H1E1 156 aaKnown RBP11.63□□□□□ -0.55
FOXN3-204ENST00000553840 HLA-DQA1P01909 254 aa11.62□□□□□ -0.55
FOXN3-204ENST00000553840 CNFNQ9BYD5 112 aa11.62□□□□□ -0.55
FOXN3-204ENST00000553840 Q6ZSA8 131 aa11.61□□□□□ -0.55
FOXN3-204ENST00000553840 LINC00269Q8N2A0 174 aa11.61□□□□□ -0.55
FOXN3-204ENST00000553840 PGLYRP4Q96LB8 373 aa11.61□□□□□ -0.55
FOXN3-204ENST00000553840 SMDT1Q9H4I9 107 aa11.61□□□□□ -0.55
FOXN3-204ENST00000553840 PRR34Q9NV39 138 aa11.61□□□□□ -0.55
FOXN3-204ENST00000553840 GATCO43716 136 aaKnown RBP11.6□□□□□ -0.55
FOXN3-204ENST00000553840 CLLU1Q5K131 121 aa11.6□□□□□ -0.55
FOXN3-204ENST00000553840 TMEM243Q9BU79 118 aa11.6□□□□□ -0.55
FOXN3-204ENST00000553840 UBE2L6O14933 153 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms