RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
SYNE2-211ENST00000553801 BORCS7-ASMTA0A0B4J1R7 106 aa11.29□□□□□ -0.6
SYNE2-211ENST00000553801 hDV102S1A0JD36 115 aa11.29□□□□□ -0.6
SYNE2-211ENST00000553801 F5H697 171 aa11.29□□□□□ -0.6
SYNE2-211ENST00000553801 LTAP01374 205 aa11.29□□□□□ -0.6
SYNE2-211ENST00000553801 GAGE6Q13070 117 aa11.29□□□□□ -0.6
SYNE2-211ENST00000553801 NTM-AS1Q6ZSK4 140 aa11.29□□□□□ -0.6
SYNE2-211ENST00000553801 TCEAL7Q9BRU2 100 aa11.29□□□□□ -0.6
SYNE2-211ENST00000553801 DERL1Q9BUN8 251 aa11.29□□□□□ -0.6
SYNE2-211ENST00000553801 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
SYNE2-211ENST00000553801 OR10AG1Q8NH19 301 aa11.28□□□□□ -0.6
SYNE2-211ENST00000553801 A0A087WYN8 130 aa11.27□□□□□ -0.61
SYNE2-211ENST00000553801 CXCL1P09341 107 aa11.27□□□□□ -0.61
SYNE2-211ENST00000553801 AKR1C8PQ5T2L2 129 aa11.27□□□□□ -0.61
SYNE2-211ENST00000553801 RPL7L1Q6DKI1 246 aaKnown RBP11.27□□□□□ -0.61
SYNE2-211ENST00000553801 INO80EQ8NBZ0 244 aaPredicted RBP11.27□□□□□ -0.61
SYNE2-211ENST00000553801 TNXBP22105 4242 aa11.26□□□□□ -0.61
SYNE2-211ENST00000553801 TRAV8-4A0A0B4J246 113 aa11.26□□□□□ -0.61
SYNE2-211ENST00000553801 P01737 135 aa11.26□□□□□ -0.61
SYNE2-211ENST00000553801 AKR1C3P42330 323 aa11.26□□□□□ -0.61
SYNE2-211ENST00000553801 FHITP49789 147 aa11.26□□□□□ -0.61
SYNE2-211ENST00000553801 REG3AQ06141 175 aa11.26□□□□□ -0.61
SYNE2-211ENST00000553801 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
SYNE2-211ENST00000553801 LRP2P98164 4655 aa11.25□□□□□ -0.61
SYNE2-211ENST00000553801 IGLV10-54A0A075B6I4 117 aa11.25□□□□□ -0.61
SYNE2-211ENST00000553801 IGHV1-24A0A0C4DH33 117 aa11.25□□□□□ -0.61
SYNE2-211ENST00000553801 SMIM17P0DL12 118 aa11.25□□□□□ -0.61
SYNE2-211ENST00000553801 IQCJQ1A5X6 159 aa11.25□□□□□ -0.61
SYNE2-211ENST00000553801 CST9LP1Q5W188 147 aa11.25□□□□□ -0.61
SYNE2-211ENST00000553801 STOML3Q8TAV4 291 aa11.25□□□□□ -0.61
SYNE2-211ENST00000553801 C7orf33Q8WU49 177 aa11.25□□□□□ -0.61
SYNE2-211ENST00000553801 ALG5Q9Y673 324 aa11.25□□□□□ -0.61
SYNE2-211ENST00000553801 MAP1LC3B2A6NCE7 125 aa11.24□□□□□ -0.61
SYNE2-211ENST00000553801 SNAI2O43623 268 aa11.24□□□□□ -0.61
SYNE2-211ENST00000553801 S100A9P06702 114 aaKnown RBP11.24□□□□□ -0.61
SYNE2-211ENST00000553801 OR5AL1P0C617 328 aa11.24□□□□□ -0.61
SYNE2-211ENST00000553801 GZMBP10144 247 aa11.24□□□□□ -0.61
SYNE2-211ENST00000553801 SPACA4Q8TDM5 124 aa11.24□□□□□ -0.61
SYNE2-211ENST00000553801 SSBP4Q9BWG4 385 aaPredicted RBP11.24□□□□□ -0.61
SYNE2-211ENST00000553801 MAP1LC3BQ9GZQ8 125 aa11.24□□□□□ -0.61
SYNE2-211ENST00000553801 MED28Q9H204 178 aa11.23□□□□□ -0.61
SYNE2-211ENST00000553801 PLAC8Q9NZF1 115 aa11.23□□□□□ -0.61
SYNE2-211ENST00000553801 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
SYNE2-211ENST00000553801 MUC21A0A0G2JKD1 596 aa11.21□□□□□ -0.61
SYNE2-211ENST00000553801 MUC21A0A140T8X8 626 aa11.21□□□□□ -0.61
SYNE2-211ENST00000553801 A0A1B0GUV1 79 aa11.21□□□□□ -0.61
SYNE2-211ENST00000553801 PHOX2AO14813 284 aa11.21□□□□□ -0.61
SYNE2-211ENST00000553801 LINC01600Q96MT4 127 aa11.21□□□□□ -0.61
SYNE2-211ENST00000553801 AP1S3Q96PC3 154 aa11.21□□□□□ -0.61
SYNE2-211ENST00000553801 H7C1H1 209 aa11.2□□□□□ -0.62
SYNE2-211ENST00000553801 SLPIP03973 132 aa11.2□□□□□ -0.62
SYNE2-211ENST00000553801 SSTP61278 116 aa11.2□□□□□ -0.62
SYNE2-211ENST00000553801 Q5BKY6 102 aa11.2□□□□□ -0.62
SYNE2-211ENST00000553801 C20orf203Q8NBC4 194 aa11.2□□□□□ -0.62
SYNE2-211ENST00000553801 KIF25-AS1Q9Y6Z4 181 aa11.2□□□□□ -0.62
SYNE2-211ENST00000553801 CFAP161Q6P656 301 aa11.19□□□□□ -0.62
SYNE2-211ENST00000553801 BAGE2Q86Y30 109 aa11.19□□□□□ -0.62
SYNE2-211ENST00000553801 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
SYNE2-211ENST00000553801 RNF213Q63HN8 5207 aa11.18□□□□□ -0.62
SYNE2-211ENST00000553801 FXYD6-FXYD2A0A087WZ82 144 aa11.18□□□□□ -0.62
SYNE2-211ENST00000553801 GIPP09681 153 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-211ENST00000553801 RAB5CP51148 216 aa11.18□□□□□ -0.62
SYNE2-211ENST00000553801 WDR73Q6P4I2 378 aa11.18□□□□□ -0.62
SYNE2-211ENST00000553801 MLST8Q9BVC4 326 aa11.18□□□□□ -0.62
SYNE2-211ENST00000553801 M0QY20 66 aa11.17□□□□□ -0.62
SYNE2-211ENST00000553801 PAGE4O60829 102 aa11.17□□□□□ -0.62
SYNE2-211ENST00000553801 GTSF1Q8WW33 167 aa11.17□□□□□ -0.62
SYNE2-211ENST00000553801 IGLV4-60A0A075B6I1 120 aa11.16□□□□□ -0.62
SYNE2-211ENST00000553801 MGPP08493 103 aa11.16□□□□□ -0.62
SYNE2-211ENST00000553801 UBE2L6O14933 153 aa11.15□□□□□ -0.62
SYNE2-211ENST00000553801 PFDN1O60925 122 aa11.15□□□□□ -0.62
SYNE2-211ENST00000553801 NDUFS6O75380 124 aaKnown RBP11.15□□□□□ -0.62
SYNE2-211ENST00000553801 RPS10P46783 165 aaKnown RBP11.15□□□□□ -0.62
SYNE2-211ENST00000553801 SULT1A2P50226 295 aa11.15□□□□□ -0.62
SYNE2-211ENST00000553801 COX6A2Q02221 97 aa11.15□□□□□ -0.62
SYNE2-211ENST00000553801 MAJINQ3KP22 176 aa11.15□□□□□ -0.62
SYNE2-211ENST00000553801 GFRA4Q9GZZ7 299 aa11.15□□□□□ -0.62
SYNE2-211ENST00000553801 PRR3P79522 188 aaKnown RBP11.14□□□□□ -0.63
SYNE2-211ENST00000553801 A0A0J9YXV3 536 aa11.13□□□□□ -0.63
SYNE2-211ENST00000553801 SCO2A0A1W2PP80 73 aa11.13□□□□□ -0.63
SYNE2-211ENST00000553801 NKX2-5P52952 324 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-211ENST00000553801 SUMO4Q6EEV6 95 aa11.13□□□□□ -0.63
SYNE2-211ENST00000553801 PGLYRP4Q96LB8 373 aa11.13□□□□□ -0.63
SYNE2-211ENST00000553801 IGKV2-24A0A0C4DH68 120 aa11.12□□□□□ -0.63
SYNE2-211ENST00000553801 GAGE12HA6NDE8 117 aa11.12□□□□□ -0.63
SYNE2-211ENST00000553801 RASL11AQ6T310 242 aa11.12□□□□□ -0.63
SYNE2-211ENST00000553801 REG3GQ6UW15 175 aa11.12□□□□□ -0.63
SYNE2-211ENST00000553801 STPG4Q8N801 248 aa11.12□□□□□ -0.63
SYNE2-211ENST00000553801 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
SYNE2-211ENST00000553801 PRSS3P2Q8NHM4 247 aa11.12□□□□□ -0.63
SYNE2-211ENST00000553801 TPPP3Q9BW30 176 aa11.12□□□□□ -0.63
SYNE2-211ENST00000553801 CACNG7P62955 275 aa11.11□□□□□ -0.63
SYNE2-211ENST00000553801 TMUB2Q71RG4 321 aa11.11□□□□□ -0.63
SYNE2-211ENST00000553801 FER1L6-AS1Q8NA97 138 aa11.11□□□□□ -0.63
SYNE2-211ENST00000553801 SFT2D1Q8WV19 159 aa11.11□□□□□ -0.63
SYNE2-211ENST00000553801 AMTP48728 403 aa11.1□□□□□ -0.63
SYNE2-211ENST00000553801 RPS20P60866 119 aaKnown RBP11.1□□□□□ -0.63
SYNE2-211ENST00000553801 COTL1Q14019 142 aa11.1□□□□□ -0.63
SYNE2-211ENST00000553801 SPINK6Q6UWN8 80 aa11.1□□□□□ -0.63
SYNE2-211ENST00000553801 LYPD6BQ8NI32 183 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms